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L3_122_031G1_scaffold_13

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Displaying items 1-30 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_13_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(153..1604)
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVU0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17165.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_122_031G1_scaffold_13_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2212..5079
DNA (2868bp) protein (956aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQU2_CLOPF
Putative enterotoxin {ECO:0000313|EMBL:EDT15677.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
entA; enterotoxin
L3_122_031G1_scaffold_13_3
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5368..8568)
DNA (3201bp) protein (1067aa)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QNG1_9BACI
DEAD/DEAH box helicase {ECO:0000313|EMBL:KEI07139.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
hsdR; type I site-specific deoxyribonuclease
L3_122_031G1_scaffold_13_4
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8695..9948)
DNA (1254bp) protein (418aa)
Type I restriction-modification system, S subunit (Fragment) n=4 Tax=Streptococcus mutans RepID=M2LLB2_STRMG
Type I restriction enzyme, S subunit {ECO:0000313|EMBL:EMZ12299.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
type I restriction-modification system, S subunit
L3_122_031G1_scaffold_13_5
Clostridium sp. K25, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9938..11485)
DNA (1548bp) protein (516aa)
hsdM2; type I restriction-modification system methyltransferase subunit HsdM2 (EC:3.1.21.3)
Type I restriction-modification system, M subunit n=1 Tax=Enterococcus saccharolyticus ATCC 43076 RepID=S0NHM8_9ENTE
N-6 DNA methylase {ECO:0000313|EMBL:KEI07141.1}; TaxID=1443109 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. K25.;"
L3_122_031G1_scaffold_13_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11742..12683)
DNA (942bp) protein (314aa)
Putative type II restriction enzyme HphI n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1R5Y5_CLOPF
Putative type II restriction enzyme HphI {ECO:0000313|EMBL:EDT24366.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_122_031G1_scaffold_13_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12962..13732)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CVU3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17168.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_122_031G1_scaffold_13_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13985..14605)
DNA (621bp) protein (207aa)
Conserved domain protein n=2 Tax=Clostridium perfringens RepID=Q0TR27_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT72980.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_122_031G1_scaffold_13_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15675..16139
DNA (465bp) protein (155aa)
Transcription elongation factor GreA n=10 Tax=Clostridium perfringens RepID=H7CVU5_CLOPF
greA; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_122_031G1_scaffold_13_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16344..21110)
DNA (4767bp) protein (1589aa)
Putative alpha-N-acetylgalactosaminidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRM2_CLOPF
Putative alpha-N-acetylgalactosaminidase {ECO:0000313|EMBL:EDT15710.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
sialidase-like protein
L3_122_031G1_scaffold_13_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21368..23131
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJL1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79974.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_122_031G1_scaffold_13_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23254..27321)
DNA (4068bp) protein (1356aa)
Beta-galactosidase {ECO:0000313|EMBL:EDS79959.1}; EC=3.2.1.23 {ECO:0000313|EMBL:EDS79959.1};; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Beta-galactosidase n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJL0_CLOPF
beta-galactosidase
L3_122_031G1_scaffold_13_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27570..28904)
DNA (1335bp) protein (445aa)
Amidohydrolase domain protein n=2 Tax=Clostridium perfringens RepID=Q0TR22_CLOP1
amidohydrolase
Amidohydrolase domain protein {ECO:0000313|EMBL:EDT15643.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_13_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29053..30759)
DNA (1707bp) protein (569aa)
Adenine deaminase {ECO:0000255|HAMAP-Rule:MF_01518}; Short=Adenase {ECO:0000255|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000255|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000255|HAMAP-Rule:MF_01518};; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Adenine deaminase n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=ADEC_CLOP1
adenine deaminase
L3_122_031G1_scaffold_13_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30775..31821)
DNA (1047bp) protein (349aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REK2_CLOPF
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:EDT27577.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
ABC transporter substrate-binding protein
L3_122_031G1_scaffold_13_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31861..32892)
DNA (1032bp) protein (344aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BRM8_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT15652.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter ATP-binding protein
L3_122_031G1_scaffold_13_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32928..33710)
DNA (783bp) protein (261aa)
ABC transporter, permease protein n=2 Tax=Clostridium perfringens RepID=Q0TR18_CLOP1
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EDT27558.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_122_031G1_scaffold_13_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33712..34542)
DNA (831bp) protein (277aa)
ABC transporter, permease protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR17_CLOP1
ABC transporter, permease protein {ECO:0000313|EMBL:EDT15695.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L3_122_031G1_scaffold_13_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34930..36078)
DNA (1149bp) protein (383aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TR16_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15676.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_13_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36277..37242)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQF6_CLOPF
dihydrouridine synthase
L3_122_031G1_scaffold_13_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37346..38716)
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REJ6_CLOPF
MATE efflux family protein {ECO:0000313|EMBL:EDT27549.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_122_031G1_scaffold_13_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39069..39410)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJS5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79982.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_122_031G1_scaffold_13_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39422..41338)
DNA (1917bp) protein (639aa)
Oligopeptide transporter, OPT family n=4 Tax=Clostridium perfringens RepID=B1BJS4_CLOPF
Putative oligopeptide transporter {ECO:0000313|EMBL:EIA17178.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
OPT family oligopeptide transporter
L3_122_031G1_scaffold_13_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41985..45476)
DNA (3492bp) protein (1164aa)
Putative hyaluronoglucosaminidase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BWX9_CLOPF
Putative hyaluronoglucosaminidase {ECO:0000313|EMBL:EDT13796.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
nagK; hyaluronidase
L3_122_031G1_scaffold_13_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(45707..45859)
DNA (153bp) protein (51aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=H7CVV5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT24370.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_122_031G1_scaffold_13_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(46127..51190)
DNA (5064bp) protein (1688aa)
F5/8 type C domain protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REJ1_CLOPF
F5/8 type C domain protein {ECO:0000313|EMBL:EDT27596.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_122_031G1_scaffold_13_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(51638..53026)
DNA (1389bp) protein (463aa)
Putative tetracycline resistance protein n=3 Tax=Clostridium perfringens RepID=H7CVV7_CLOPF
tetracycline resistance protein
Putative tetracycline resistance protein {ECO:0000313|EMBL:EIA17182.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_122_031G1_scaffold_13_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

53445..54194
DNA (750bp) protein (250aa)
Transcriptional regulator, GntR family n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RQE9_CLOPF
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDT24393.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
transcriptional regulator
L3_122_031G1_scaffold_13_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(54313..55494)
DNA (1182bp) protein (394aa)
Pyrimidine nucleoside transporter n=5 Tax=Clostridium perfringens RepID=Q8XKV8_CLOPE
pyrimidine nucleoside transporter
Nucleoside transporter, NupC family {ECO:0000313|EMBL:EDT27601.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_122_031G1_scaffold_13_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(55880..57778)
DNA (1899bp) protein (633aa)
Putative membrane protein n=1 Tax=Clostridium perfringens CPE str. F4969 RepID=B1REI7_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT27599.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
Displaying items 1-30 of 213 in total

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