ggKbase home page

L3_122_031G1_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 179 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_15_1
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16..519)
DNA (504bp) protein (168aa)
TraG family protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ANP0_9CLOT
TraG family protein {ECO:0000313|EMBL:EFC96571.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
Type IV secretory pathway, VirD4 components
L3_122_031G1_scaffold_15_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(516..989)
DNA (474bp) protein (158aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=C0CYC0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERK65672.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
L3_122_031G1_scaffold_15_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1026..1970)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ANN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC96569.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_122_031G1_scaffold_15_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2479..2754
DNA (276bp) protein (92aa)
Collagen triple helix repeat protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YM70_9FIRM
Collagen triple helix repeat protein {ECO:0000313|EMBL:EHM54361.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_122_031G1_scaffold_15_5
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3152..4336
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:303 RepID=R7IMZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE52663.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:303.;"
hypothetical protein
L3_122_031G1_scaffold_15_6
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4340..4537
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9MEM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS69475.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L3_122_031G1_scaffold_15_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4519..5517)
DNA (999bp) protein (333aa)
Uncharacterized protein n=6 Tax=Clostridium clostridioforme RepID=N9VHA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58651.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
PpiC-type peptidyl-prolyl cis-trans isomerase
L3_122_031G1_scaffold_15_8
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5547..6332)
DNA (786bp) protein (262aa)
Cof-like hydrolase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGZ6_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EEQ57481.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
cof family hydrolase
L3_122_031G1_scaffold_15_9
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6325..6948)
DNA (624bp) protein (208aa)
Maf-like protein maf n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EGZ7_9FIRM
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
maf protein
L3_122_031G1_scaffold_15_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6967..7518)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IU00_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40211.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_031G1_scaffold_15_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7529..7969)
DNA (441bp) protein (147aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RS04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38779.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
acid phosphatase/vanadium-dependent haloperoxidase-like protein
L3_122_031G1_scaffold_15_12
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8060..8575)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFN2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99724.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_122_031G1_scaffold_15_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8624..10066)
DNA (1443bp) protein (481aa)
Glycogen synthase {ECO:0000256|HAMAP-Rule:MF_00484}; EC=2.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00484};; Starch [bacterial glycogen] synthase {ECO:0000256|HAMAP-Rule:MF_00484}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
glycogen/starch synthase (EC:2.4.1.21)
Glycogen synthase n=2 Tax=Clostridium RepID=N9Z1N0_9CLOT
L3_122_031G1_scaffold_15_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10167..10997)
DNA (831bp) protein (277aa)
Sporulation transcription factor Spo0A n=9 Tax=Clostridium RepID=N9X2A9_9CLOT
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
sporulation transcriptional activator Spo0A
L3_122_031G1_scaffold_15_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11214..12500)
DNA (1287bp) protein (429aa)
stage IV sporulation protein B (EC:3.4.21.116)
Stage IV sporulation protein B n=2 Tax=Clostridium clostridioforme RepID=G5HU67_9CLOT
Stage IV sporulation protein B {ECO:0000313|EMBL:ENZ10230.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_122_031G1_scaffold_15_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12575..14251)
DNA (1677bp) protein (559aa)
DNA repair protein RecN n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH24_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA repair protein RecN
L3_122_031G1_scaffold_15_17
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14377..14829)
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EH25_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
transcriptional regulator, ArgR family
L3_122_031G1_scaffold_15_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14844..15683)
DNA (840bp) protein (280aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDI7_9CLOT
ATP-NAD/AcoX kinase
L3_122_031G1_scaffold_15_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15704..16531)
DNA (828bp) protein (276aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDE7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40118.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hemolysin TlyA family protein
L3_122_031G1_scaffold_15_20
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16528..18441)
DNA (1914bp) protein (638aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDE2_9CLOT
deoxyxylulose-5-phosphate synthase
L3_122_031G1_scaffold_15_21
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18472..19383)
DNA (912bp) protein (304aa)
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40111.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_122_031G1_scaffold_15_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19376..19615)
DNA (240bp) protein (80aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium sp. CAG:7 RepID=R5IDD8_9CLOT
Exonuclease VII small subunit
L3_122_031G1_scaffold_15_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19612..20892)
DNA (1281bp) protein (427aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Exodeoxyribonuclease 7 large subunit n=3 Tax=Clostridium bolteae RepID=A8RS18_9CLOT
exodeoxyribonuclease VII large subunit
L3_122_031G1_scaffold_15_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20975..21439)
DNA (465bp) protein (155aa)
N utilization substance protein B homolog n=1 Tax=Clostridium sp. CAG:7 RepID=R5ITR1_9CLOT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
NusB antitermination factor
L3_122_031G1_scaffold_15_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21668..22048)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5III1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY40094.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_031G1_scaffold_15_26
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22308..23213)
DNA (906bp) protein (302aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99751.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
hypothetical protein
L3_122_031G1_scaffold_15_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23230..23883)
DNA (654bp) protein (218aa)
Stage III sporulation protein AG n=8 Tax=Clostridium RepID=N9WZG9_9CLOT
Stage III sporulation protein AG {ECO:0000313|EMBL:ENZ10520.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
hypothetical protein
L3_122_031G1_scaffold_15_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23837..24508)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B8 RepID=N9ZFZ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ38756.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
sporulation stage III protein AF
L3_122_031G1_scaffold_15_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24564..25805)
DNA (1242bp) protein (414aa)
Stage III sporulation protein AE n=2 Tax=Clostridium bolteae RepID=R0AFG0_9CLOT
Stage III sporulation protein AE {ECO:0000313|EMBL:ENZ50980.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Sporulation stage III protein AE
L3_122_031G1_scaffold_15_30
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25883..26269)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HFR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99755.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
stage III sporulation protein AD
Displaying items 1-30 of 179 in total

View Taxonomy