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L3_122_031G1_scaffold_26

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_26_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

361..2634
DNA (2274bp) protein (758aa)
Thermostable beta-glucosidase B n=1 Tax=Bifidobacterium breve CECT 7263 RepID=H3L2U8_BIFBR
Beta-glucosidase {ECO:0000313|EMBL:AHJ21601.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
Beta-glucosidase
L3_122_031G1_scaffold_26_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2846..3379
DNA (534bp) protein (178aa)
Transcriptional regulators n=10 Tax=Bifidobacterium RepID=D6DBM6_BIFLN
Transcriptional regulators
Possible MarR-type transcriptional regulator {ECO:0000313|EMBL:AAN25548.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_031G1_scaffold_26_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3376..5334
DNA (1959bp) protein (653aa)
ABC-type multidrug transport system, ATPase and permease components n=5 Tax=Bifidobacterium RepID=D6DBM5_BIFLN
ABC-type multidrug transport system, ATPase and permease components
ABC transporter transmembrane region {ECO:0000313|EMBL:CCY96345.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_031G1_scaffold_26_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5331..7346
DNA (2016bp) protein (672aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DBM4_BIFLN
Rrf2 family transcriptional regulator {ECO:0000313|EMBL:AIW44125.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
ABC-type multidrug transport system, ATPase and permease components
L3_122_031G1_scaffold_26_5
Parascardovia denticolens, Parascardovia, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7554..7889
DNA (336bp) protein (112aa)
Transporter, major facilitator family protein n=2 Tax=Parascardovia denticolens RepID=E6JZQ3_PARDN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFT83199.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR05897.1}; TaxID=864564 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Parascardovia.;" source="Parascardovia denticolens DSM 10105 = JCM 12538.;"
MFS transporter, probably The Tet38 tetracycline-resistance protein
L3_122_031G1_scaffold_26_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7968..8942
DNA (975bp) protein (325aa)
Putative ribokinase n=2 Tax=Bifidobacterium longum RepID=C5EBQ3_BIFLI
Sugar kinase {ECO:0000313|EMBL:KEY21616.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
sugar kinase
L3_122_031G1_scaffold_26_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9015..9311
DNA (297bp) protein (99aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=C5EBQ4_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EEQ55448.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_122_031G1_scaffold_26_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9474..10484
DNA (1011bp) protein (337aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B0Y1_BIFLN
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EIJ25118.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
regulatory protein LacI
L3_122_031G1_scaffold_26_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10522..11142)
DNA (621bp) protein (207aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Beta galactosidase small subunit n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XW38_9BIFI
fragment of beta galactosidase
L3_122_031G1_scaffold_26_10
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11182..12393)
DNA (1212bp) protein (404aa)
Bifunctional PLP-dependent enzyme n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MWX5_9BIFI
Bifunctional PLP-dependent enzyme {ECO:0000313|EMBL:CCY96260.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
malY2; PLP-dependent protein
L3_122_031G1_scaffold_26_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12436..12861)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BAK8_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:EIJ28401.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
hypothetical protein
L3_122_031G1_scaffold_26_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12911..16222
DNA (3312bp) protein (1104aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MV74_BIFL1
isoleucyl-tRNA synthase
L3_122_031G1_scaffold_26_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16422..17123
DNA (702bp) protein (234aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BBN5_BIFLN
hsdS3; restriction endonuclease S subunit
Restriction endonuclease S subunit {ECO:0000313|EMBL:ACD99405.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_26_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17116..18045)
DNA (930bp) protein (310aa)
Phage integrase n=5 Tax=Bifidobacterium RepID=E8MV72_BIFL1
phage integrase
Integrase {ECO:0000313|EMBL:KEY33541.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_031G1_scaffold_26_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18594..19529
DNA (936bp) protein (312aa)
Restriction endonuclease n=5 Tax=Bifidobacterium longum RepID=B3DRM1_BIFLD
mrr; restriction endonuclease
Mrr restriction endonuclease {ECO:0000313|EMBL:AAN25564.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_031G1_scaffold_26_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19561..22128
DNA (2568bp) protein (856aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EEI80718.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EEI80718.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Type I restriction-modification system, M subunit n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GVR9_BIFLN
DNA methylase
L3_122_031G1_scaffold_26_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22128..23297
DNA (1170bp) protein (390aa)
Restriction endonuclease S subunit n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HQY7_BIFBI
Restriction endonuclease S subunit {ECO:0000313|EMBL:EKE49848.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Sau1hsdS1
L3_122_031G1_scaffold_26_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23312..24859
DNA (1548bp) protein (516aa)
Divergent AAA domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GVT3_BIFLN
Divergent AAA domain protein {ECO:0000313|EMBL:EEI80538.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
transcriptional regulator
L3_122_031G1_scaffold_26_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24856..28143
DNA (3288bp) protein (1096aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EEI80539.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EEI80539.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Type I site-specific deoxyribonuclease, HsdR family n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GVT4_BIFLN
deoxyribonuclease
L3_122_031G1_scaffold_26_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28211..29431)
DNA (1221bp) protein (407aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
S-adenosylmethionine synthase n=2 Tax=Bifidobacterium RepID=E8MV66_BIFL1
S-adenosylmethionine synthase
L3_122_031G1_scaffold_26_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29709..29993)
DNA (285bp) protein (95aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
DNA-directed RNA polymerase subunit omega n=17 Tax=Bifidobacterium RepID=RPOZ_BIFLD
DNA-directed RNA polymerase omega subunit
L3_122_031G1_scaffold_26_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30288..32057
DNA (1770bp) protein (590aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=ILVD_BIFLO
L3_122_031G1_scaffold_26_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32148..33134)
DNA (987bp) protein (329aa)
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Methionyl-tRNA formyltransferase n=8 Tax=Bifidobacterium RepID=FMT_BIFLD
L3_122_031G1_scaffold_26_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33158..33862)
DNA (705bp) protein (235aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZVP0_BIFLJ
HAD family hydrolase
HAD family hydrolase {ECO:0000313|EMBL:AIW44117.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_26_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33921..36233)
DNA (2313bp) protein (771aa)
Probable primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Probable primosomal protein N n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G3G9_BIFLO
priA; primosome assembly protein PriA
L3_122_031G1_scaffold_26_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36273..36995)
DNA (723bp) protein (241aa)
SerB2 n=5 Tax=Bifidobacterium RepID=E4R0X8_BIFLM
phosphoserine phosphatase
Phosphoserine phosphatase {ECO:0000313|EMBL:BAJ71654.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_122_031G1_scaffold_26_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37046..37744
DNA (699bp) protein (233aa)
DedA family protein n=11 Tax=Bifidobacterium RepID=V6XXP2_BIFLN
membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:ACD99415.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_26_28
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37805..39370
DNA (1566bp) protein (522aa)
AAA ATPase forming ring-shaped complexes n=2 Tax=Bifidobacterium RepID=F8ATT6_BIFLN
ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_031G1_scaffold_26_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39392..41059
DNA (1668bp) protein (556aa)
Putative proteasome component n=2 Tax=Bifidobacterium longum RepID=B3DRN5_BIFLD
Putative proteasome component {ECO:0000313|EMBL:ACD99417.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
proteasome component
L3_122_031G1_scaffold_26_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41071..41967
DNA (897bp) protein (299aa)
Possible inositol monophosphatase n=15 Tax=Bifidobacterium RepID=Q8G3G4_BIFLO
inositol monophosphatase
Putative inositol monophosphatase {ECO:0000313|EMBL:BAJ71650.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Displaying items 1-30 of 124 in total

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