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L3_122_031G1_scaffold_64

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Displaying items 1-30 of 89 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_64_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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97..3102
DNA (3006bp) protein (1002aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RL14_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ34996.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Predicted Zn-dependent peptidases, insulinase-like
L3_122_031G1_scaffold_64_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3532..3852
DNA (321bp) protein (107aa)
Uncharacterized protein n=17 Tax=Clostridium RepID=A8RL52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18154.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
PadR family transcriptional regulator
L3_122_031G1_scaffold_64_3
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3849..4634
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ65938.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_122_031G1_scaffold_64_4
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

4903..5100
DNA (198bp) protein (66aa)
Putative stress-responsive transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6WC22_9FIRM
Putative stress-responsive transcriptional regulator {ECO:0000313|EMBL:CDC91767.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
phage shock protein C, PspC
L3_122_031G1_scaffold_64_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5216..7528)
DNA (2313bp) protein (771aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ48_9FIRM
L3_122_031G1_scaffold_64_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7611..8654)
DNA (1044bp) protein (348aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Ribonucleotide reductase, beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RQ49_9FIRM
L3_122_031G1_scaffold_64_7
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8815..9690
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75075.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_122_031G1_scaffold_64_8
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9716..11965)
DNA (2250bp) protein (750aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Clostridium sp. CAG:149 RepID=R5MKK0_9CLOT
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFE14668.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
diguanylate cyclase (GGDEF) domain
L3_122_031G1_scaffold_64_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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12214..12888
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FL25_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83280.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_031G1_scaffold_64_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12885..14102
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PTU7_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_122_031G1_scaffold_64_11
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

14195..14803
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5H9C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY26310.1}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
hypothetical protein
L3_122_031G1_scaffold_64_12
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14908..16470
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N2X9_SLAHD
Uncharacterized protein {ECO:0000313|EMBL:ETP72278.1}; Flags: Precursor;; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_122_031G1_scaffold_64_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16516..17298)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Butyrivibrio sp. NC2007 RepID=UPI0003B69A4B
hypothetical protein
UPF0246 protein CK3_07360 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_122_031G1_scaffold_64_14
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17330..18613)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F568_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00185.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate transporter subunit DctM
L3_122_031G1_scaffold_64_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18615..19208)
DNA (594bp) protein (198aa)
Uncharacterized protein n=10 Tax=Clostridium RepID=N9VZ75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13633.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
tripartite ATP-independent periplasmic transporter DctQ
L3_122_031G1_scaffold_64_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19220..20245)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F5P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00183.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
TRAP dicarboxylate transporter subunit DctP
L3_122_031G1_scaffold_64_17
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21246..21587
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6J8T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES78735.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_122_031G1_scaffold_64_18
Ruminococcus obeum CAG:39, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21550..22185
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=R7D7S7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD86674.1}; TaxID=1263107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus obeum CAG:39.;"
hypothetical protein
L3_122_031G1_scaffold_64_19
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22219..22584
DNA (366bp) protein (122aa)
Transcriptional regulator, HxlR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4X7_9CLOT
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EEG72745.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
HxlR family transcriptional regulator
L3_122_031G1_scaffold_64_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22668..23174
DNA (507bp) protein (169aa)
Raf-like protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C4X8_9CLOT
Raf-like protein {ECO:0000313|EMBL:EEG72746.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Raf kinase inhibitor-like protein, YbhB/YbcL family
L3_122_031G1_scaffold_64_21
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23214..24551)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5DMC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX81368.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
putative efflux protein, MATE family
L3_122_031G1_scaffold_64_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24668..25369)
DNA (702bp) protein (234aa)
Two-component system, OmpR family, KDP operon response regulator KdpE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XH21_9FIRM
Two-component system, OmpR family, KDP operon response regulator KdpE {ECO:0000313|EMBL:EGJ45660.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_031G1_scaffold_64_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25430..26077)
DNA (648bp) protein (216aa)
TrkA-N domain protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILP7_9CLOT
TrkA-N domain protein {ECO:0000313|EMBL:CCY41244.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
K+ transport systems, NAD-binding component
L3_122_031G1_scaffold_64_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26096..27439)
DNA (1344bp) protein (448aa)
Potassium uptake protein TrkH family n=1 Tax=Clostridium sp. CAG:7 RepID=R5IGI0_9CLOT
Potassium uptake protein TrkH family {ECO:0000313|EMBL:CCY41243.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Trk-type K+ transport systems, membrane components
L3_122_031G1_scaffold_64_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27588..28418)
DNA (831bp) protein (277aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWZ6_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCY41241.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
AraC family transcriptional regulator
L3_122_031G1_scaffold_64_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28867..29085
DNA (219bp) protein (73aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RVA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15304.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_122_031G1_scaffold_64_27
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29078..29380
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE98654.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
spore coat protein CotJB
L3_122_031G1_scaffold_64_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29380..29997
DNA (618bp) protein (206aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RV99_9CLOT
Spore coat protein JC {ECO:0000313|EMBL:ENZ35077.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
manganese containing catalase
L3_122_031G1_scaffold_64_29
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30089..31102)
DNA (1014bp) protein (338aa)
Glucan-binding domain (YG repeat)-like protein n=1 Tax=Clostridium sp. CAG:299 RepID=R7AV27_9CLOT
Glucan-binding domain (YG repeat)-like protein {ECO:0000313|EMBL:CDD45702.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
Glucan-binding domain (YG repeat)-like protein
L3_122_031G1_scaffold_64_30
Clostridium sp. CAG:299, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31127..36547)
DNA (5421bp) protein (1807aa)
Putative fibronectin type III domain protein n=1 Tax=Clostridium sp. CAG:299 RepID=R6ZX94_9CLOT
Putative fibronectin type III domain protein {ECO:0000313|EMBL:CDD45701.1}; TaxID=1262792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:299.;"
coagulation factor 5/8 type domain-containing protein
Displaying items 1-30 of 89 in total

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