ggKbase home page

L3_122_031G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 94 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_71_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(142..570)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44618.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ferric uptake regulator family protein
L3_122_031G1_scaffold_71_2
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(722..1693)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6V4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44617.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LysR family transcriptional regulator
L3_122_031G1_scaffold_71_3
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1690..2502)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6G1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44616.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
PHP domain-containing protein
L3_122_031G1_scaffold_71_4
unknown

Not on your lists

2507..2662
DNA (156bp) protein (52aa)

This feature has no annotations

L3_122_031G1_scaffold_71_5
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2890..3651
DNA (762bp) protein (254aa)
RNA binding S1 domain-containing protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXU3_9CLOT
RNA binding S1 domain-containing protein {ECO:0000313|EMBL:CCY41562.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Ribosomal protein S1
L3_122_031G1_scaffold_71_6
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3669..4316
DNA (648bp) protein (216aa)
GTP pyrophosphokinase YwaC {ECO:0000313|EMBL:KJJ75758.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJJ75758.1};; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HI88_9CLOT
hypothetical protein
L3_122_031G1_scaffold_71_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4313..6160
DNA (1848bp) protein (616aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Clostridium bolteae 90B8 RepID=R0AGB0_9CLOT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:ENZ35413.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
glycerophosphoryl diester phosphodiesterase
L3_122_031G1_scaffold_71_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6205..6657
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=17 Tax=Clostridium RepID=A8RLK6_9CLOT
L3_122_031G1_scaffold_71_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6672..7154
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IHG2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41568.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_031G1_scaffold_71_10
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7151..8542
DNA (1392bp) protein (464aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HI84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KJJ75762.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_122_031G1_scaffold_71_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8539..10050
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41572.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATPase
L3_122_031G1_scaffold_71_12
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10073..10477)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XP75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97738.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
thioesterase superfamily protein
L3_122_031G1_scaffold_71_13
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10747..11931
DNA (1185bp) protein (395aa)
Butyryl-CoA dehydrogenase (EC:1.3.8.1)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TVQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60972.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_122_031G1_scaffold_71_14
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12056..13345
DNA (1290bp) protein (430aa)
frc; formyl-coenzyme A transferase Frc (EC:2.8.3.16)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TPN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ60971.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
L3_122_031G1_scaffold_71_15
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13405..14547
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase (EC:1.3.8.1)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9VGT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23160.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
L3_122_031G1_scaffold_71_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14565..15353
DNA (789bp) protein (263aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9X2D6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ58773.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Electron transfer flavoprotein alpha/beta-subunit
L3_122_031G1_scaffold_71_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15410..16420
DNA (1011bp) protein (337aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=N9WQQ4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10276.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
etfA; electron transfer flavoprotein subunit alpha
L3_122_031G1_scaffold_71_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16493..18127
DNA (1635bp) protein (545aa)
Long-chain-fatty-acid--CoA ligase (EC:6.2.1.3)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XQ65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97731.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
L3_122_031G1_scaffold_71_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18165..18716
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3A9A9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD01568.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_122_031G1_scaffold_71_20
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18759..20060
DNA (1302bp) protein (434aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=N9X2E1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF23166.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:511.;"
H+/gluconate symporter and related permeases
L3_122_031G1_scaffold_71_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20065..20952)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XDH4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97727.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
transcriptional regulator, LysR family
L3_122_031G1_scaffold_71_22
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21194..22738
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IQU2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY42629.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_031G1_scaffold_71_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22770..23480
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41577.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_122_031G1_scaffold_71_24
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23551..24846
DNA (1296bp) protein (432aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Dihydroorotase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0DB45_9CLOT
dihydroorotase
L3_122_031G1_scaffold_71_25
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25080..25955
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KNP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63747.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_122_031G1_scaffold_71_26
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26341..27000
DNA (660bp) protein (220aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RLM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB63746.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-)
L3_122_031G1_scaffold_71_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27021..27785
DNA (765bp) protein (255aa)
amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-) (EC:3.6.3.- 3.6.3.21)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IXW3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41582.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_122_031G1_scaffold_71_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28005..28631
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RLN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18032.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_122_031G1_scaffold_71_29
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28687..30228)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9VXI6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95455.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
response regulator
L3_122_031G1_scaffold_71_30
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30230..32002)
DNA (1773bp) protein (591aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XII5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY95456.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
integral membrane sensor signal transduction histidine kinase
Displaying items 1-30 of 94 in total

View Taxonomy