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L3_122_031G1_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_97_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(161..1603)
DNA (1443bp) protein (481aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Pyruvate kinase n=13 Tax=Bifidobacterium RepID=Q8G5M1_BIFLO
pykF; pykf
L3_122_031G1_scaffold_97_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1771..2757)
DNA (987bp) protein (329aa)
Membrane protein TerC, possibly involved in tellurium resistance n=18 Tax=Bifidobacterium RepID=D6D968_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAN24797.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_031G1_scaffold_97_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2926..5037)
DNA (2112bp) protein (704aa)
UvrABC system protein B n=14 Tax=Bifidobacterium RepID=D6D969_BIFLN
Excinuclease ABC subunit B
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_122_031G1_scaffold_97_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5049..5666)
DNA (618bp) protein (206aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Dephospho-CoA kinase n=7 Tax=Bifidobacterium longum RepID=D6D970_BIFLN
dephospho-CoA kinase
L3_122_031G1_scaffold_97_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(5840..7315)
DNA (1476bp) protein (492aa)
30S ribosomal protein S1 n=13 Tax=Bifidobacterium longum RepID=D6D971_BIFLN
30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000313|EMBL:ESV33234.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_031G1_scaffold_97_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7435..8310)
DNA (876bp) protein (292aa)
Bifunctional protein FolD n=18 Tax=Bifidobacterium RepID=FOLD_BIFLO
methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_97_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8414..9610
DNA (1197bp) protein (399aa)
ABC transporter substrate binding component n=2 Tax=Bifidobacterium longum RepID=E8MHP2_BIFL2
ABC transporter substrate-binding protein
ABC transporter substrate binding component {ECO:0000313|EMBL:BAJ66295.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_122_031G1_scaffold_97_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9783..10673
DNA (891bp) protein (297aa)
ABC-type Mn2+/Zn2+ transport systems ATPase component n=14 Tax=Bifidobacterium RepID=B3DSS5_BIFLD
ABC transporter ATP-binding protein
ABC-type Mn2+/Zn2+ transport systems ATPase component {ECO:0000313|EMBL:ACD98194.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_97_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10740..11573
DNA (834bp) protein (278aa)
ABC-type Mn2+/Zn2+ transport systems permease component n=14 Tax=Bifidobacterium RepID=B3DSS6_BIFLD
ABC transporter permease
ABC 3 transport family protein {ECO:0000313|EMBL:EEI81015.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_031G1_scaffold_97_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11625..12149)
DNA (525bp) protein (175aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Bifidobacterium longum E18 RepID=V6Y078_BIFLN
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
L3_122_031G1_scaffold_97_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12256..12849)
DNA (594bp) protein (198aa)
Transcriptional_regulator n=10 Tax=Bifidobacterium longum RepID=B3DSS8_BIFLD
transcriptional regulator
CarD-like protein {ECO:0000313|EMBL:EIJ23904.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_97_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13027..15279
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
1,4-alpha-glucan-branching enzyme n=5 Tax=Bifidobacterium longum RepID=V6XVF3_BIFLN
1,4-alpha-glucan branching protein
L3_122_031G1_scaffold_97_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15315..15995
DNA (681bp) protein (227aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=19 Tax=Bifidobacterium RepID=D6D978_BIFLN
winged helix family two component transcriptional regulator
Chemotaxis protein CheY {ECO:0000313|EMBL:KEY21906.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_97_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16000..17034
DNA (1035bp) protein (345aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Histidine kinase sensor of two-component system n=17 Tax=Bifidobacterium RepID=Q8G5K8_BIFLO
two-component sensor kinase
L3_122_031G1_scaffold_97_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17102..17488
DNA (387bp) protein (129aa)
SOS-response transcriptional repressor n=11 Tax=Bifidobacterium RepID=B3DST2_BIFLD
lexA2; lexa2
Peptidase S24 {ECO:0000313|EMBL:KEY32632.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_031G1_scaffold_97_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17404..18126)
DNA (723bp) protein (241aa)
Phosphoribosyl transferase domain protein n=2 Tax=Bifidobacterium longum RepID=C2GU95_BIFLN
Phosphoribosyl transferase domain protein {ECO:0000313|EMBL:EEI81022.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
hypothetical protein
L3_122_031G1_scaffold_97_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18136..18942)
DNA (807bp) protein (269aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G5K5_BIFLO
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KEY32631.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_031G1_scaffold_97_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19019..19459
DNA (441bp) protein (147aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=Q8G5K4_BIFLO
peptidase
Uncharacterized protein {ECO:0000313|EMBL:EEQ54845.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_122_031G1_scaffold_97_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19562..21103)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=B3DST6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW43576.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_97_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21100..24147)
DNA (3048bp) protein (1016aa)
Uncharacterized protein n=8 Tax=Bifidobacterium longum RepID=Q8G5K2_BIFLO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EIJ23855.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_97_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24239..24538)
DNA (300bp) protein (100aa)
Transcriptional regulator WhiB2 n=15 Tax=Bifidobacterium RepID=WHIB2_BIFLO
transcriptional regulator
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_031G1_scaffold_97_22
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24789..26222
DNA (1434bp) protein (478aa)
Transcriptional regulator n=6 Tax=Bifidobacterium RepID=B3DST9_BIFLD
lytR; transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCY95601.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_031G1_scaffold_97_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26392..28218
DNA (1827bp) protein (609aa)
DNA segregation ATPase n=11 Tax=Bifidobacterium RepID=B3DSU0_BIFLD
hypothetical protein
Cell division protein FtsK {ECO:0000313|EMBL:KEY21896.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_97_24
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28332..28610
DNA (279bp) protein (93aa)
Transcriptional regulator WhiB1 n=23 Tax=Bifidobacterium RepID=WHIB1_BIFLO
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_122_031G1_scaffold_97_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28683..30170)
DNA (1488bp) protein (496aa)
Histidine kinase-like protein n=17 Tax=Bifidobacterium RepID=Q8G5J8_BIFLO
two-component sensor kinase
Histidine kinase {ECO:0000313|EMBL:KHD96073.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_122_031G1_scaffold_97_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30333..31106)
DNA (774bp) protein (258aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DL32_BIFLN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66277.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
L3_122_031G1_scaffold_97_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31231..32175
DNA (945bp) protein (315aa)
Predicted membrane protein, hemolysin III homolog n=12 Tax=Bifidobacterium RepID=D6D989_BIFLN
hypothetical protein
Hypothetical hemolysin III-like membrane protein {ECO:0000313|EMBL:ACD98213.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_97_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32230..32709)
DNA (480bp) protein (160aa)
Transcription elongation factor GreA n=18 Tax=Bifidobacterium RepID=B3DSU5_BIFLD
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_97_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32808..33215)
DNA (408bp) protein (136aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Peptidyl-prolyl cis-trans isomerase n=16 Tax=Bifidobacterium RepID=B3DSU6_BIFLD
peptidyl-prolyl isomerase
L3_122_031G1_scaffold_97_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33357..34817)
DNA (1461bp) protein (487aa)
L-serine dehydratase n=9 Tax=Bifidobacterium longum RepID=Q8G5J3_BIFLO
L-serine dehydratase
L-serine deaminase {ECO:0000313|EMBL:ACD98216.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Displaying items 1-30 of 102 in total

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