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L3_122_031G1_scaffold_105

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Displaying items 1-30 of 82 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_105_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(580..1236)
DNA (657bp) protein (219aa)
Putative membrane protein n=2 Tax=Clostridium perfringens RepID=B1RR14_CLOPF
Putative membrane protein {ECO:0000313|EMBL:EDT70212.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
hypothetical protein
L3_122_031G1_scaffold_105_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1921..3120
DNA (1200bp) protein (400aa)
Peptidase, M23/M37 family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKN5_CLOPF
M24/M37 family peptidase
Peptidase, M23/M37 family {ECO:0000313|EMBL:EDS79649.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_122_031G1_scaffold_105_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3343..4206
DNA (864bp) protein (288aa)
5'-nucleotidase n=3 Tax=Clostridium perfringens RepID=H7CRZ7_CLOPF
5'-nucleotidase {ECO:0000313|EMBL:EIA18553.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
5'-nucleotidase
L3_122_031G1_scaffold_105_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4411..4608)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0SWH8_CLOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15497.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_105_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5155..6480)
DNA (1326bp) protein (442aa)
6-phospho-alpha-glucosidase {ECO:0000313|EMBL:EDT15496.1}; EC=3.2.1.122 {ECO:0000313|EMBL:EDT15496.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
6-phospho-alpha-glucosidase n=3 Tax=Clostridium perfringens RepID=B1BRZ8_CLOPF
malH; maltose-6'-phosphate glucosidase
L3_122_031G1_scaffold_105_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6667..7236)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XNY4_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAB79904.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_122_031G1_scaffold_105_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7460..8230)
DNA (771bp) protein (257aa)
Transcriptional regulator, RpiR family n=4 Tax=Clostridium perfringens RepID=B1BS00_CLOPF
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15474.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_031G1_scaffold_105_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8485..10068)
DNA (1584bp) protein (528aa)
Pts system maltose-specific eiicb component {ECO:0000313|EMBL:EDT15519.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDT15519.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Pts system maltose-specific eiicb component n=2 Tax=Clostridium perfringens RepID=B1RF96_CLOPF
ptiB; PTS system arbutin-like transporter subunit IIBC
L3_122_031G1_scaffold_105_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10535..11392)
DNA (858bp) protein (286aa)
Putative ABC transporter ATP-binding protein CPE0195; EC=3.6.3.-;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
Putative ABC transporter ATP-binding protein CPE0195 n=2 Tax=Clostridium perfringens RepID=Y195_CLOPE
cbiO; cobalt transporter ATP-binding subunit
L3_122_031G1_scaffold_105_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11407..12177)
DNA (771bp) protein (257aa)
Cobalt ABC transporter, permease protein CbiQ n=3 Tax=Clostridium perfringens RepID=Q0TUN9_CLOP1
cbiQ; cobalt ABC transporter permease CbiQ
Cobalt ABC transporter, permease protein CbiQ {ECO:0000313|EMBL:EDT23918.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_122_031G1_scaffold_105_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12161..12472)
DNA (312bp) protein (104aa)
Cobalt transport protein CbiN n=10 Tax=Clostridium perfringens RepID=CBIN_CLOPE
cbiN; cobalt transport protein CbiN
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_105_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12472..13215)
DNA (744bp) protein (248aa)
Cobalt transport protein CbiM n=8 Tax=Clostridium perfringens RepID=H7CRZ0_CLOPF
cbiM; cobalt transport protein CbiM
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_122_031G1_scaffold_105_13
unknown

Not on your lists

comp(13897..14040)
DNA (144bp) protein (48aa)

This feature has no annotations

L3_122_031G1_scaffold_105_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14092..18978)
DNA (4887bp) protein (1629aa)
Hyaluronidase {ECO:0000313|EMBL:EDT72384.1}; EC=3.2.1.35 {ECO:0000313|EMBL:EDT72384.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
Hyaluronidase n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V170_CLOPF
nagH; hyaluronidase
L3_122_031G1_scaffold_105_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19241..19630
DNA (390bp) protein (130aa)
Uncharacterized protein CPE0190 n=3 Tax=Clostridium perfringens RepID=Y190_CLOPE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA18628.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_122_031G1_scaffold_105_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19830..20669)
DNA (840bp) protein (280aa)
Uncharacterized HTH-type transcriptional regulator CPE0189 n=9 Tax=Clostridium perfringens RepID=Y189_CLOPE
RpiR family transcriptional regulator
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EDT15444.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_105_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20860..21747)
DNA (888bp) protein (296aa)
Uncharacterized protein CPE0188 n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Y188_CLOPE
ROK family protein
Uncharacterized protein CPE0188; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_122_031G1_scaffold_105_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21903..22355)
DNA (453bp) protein (151aa)
Uncharacterized protein n=4 Tax=Clostridium perfringens RepID=B1BS10_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15485.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_105_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22466..23983)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XNZ2_CLOPE
hypothetical protein
Sodium/solute symporter family protein {ECO:0000313|EMBL:EDS79687.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_122_031G1_scaffold_105_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24086..24952)
DNA (867bp) protein (289aa)
nanA; N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase; Short=NAL;; Short=Neu5Ac lyase;; EC=4.1.3.3;; N-acetylneuraminate pyruvate-lyase; N-acetylneuraminic acid aldolase; Sialate lyase; Sialic acid aldolase; Sialic acid lyase; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
N-acetylneuraminate lyase n=7 Tax=Clostridium perfringens RepID=NANA_CLOP1
L3_122_031G1_scaffold_105_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24989..25654)
DNA (666bp) protein (222aa)
nanE; N-acetylmannosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=7 Tax=Clostridium perfringens RepID=NANE_CLOP1
L3_122_031G1_scaffold_105_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25939..26607)
DNA (669bp) protein (223aa)
Nitroreductase family protein n=3 Tax=Clostridium perfringens RepID=B1BS14_CLOPF
Nitroreductase family protein {ECO:0000313|EMBL:EDT27292.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
nitroreductase
L3_122_031G1_scaffold_105_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26919..27944
DNA (1026bp) protein (342aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium perfringens RepID=B1RQZ5_CLOPF
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDT72397.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
ABC transporter ATP-binding protein
L3_122_031G1_scaffold_105_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27947..28765
DNA (819bp) protein (273aa)
Putative ABC transporter, permease protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BS16_CLOPF
Putative ABC transporter, permease protein {ECO:0000313|EMBL:EDT15481.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
ABC transporter permease
L3_122_031G1_scaffold_105_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28770..29561
DNA (792bp) protein (264aa)
ABC-2 type transport system permease protein n=4 Tax=Clostridium perfringens RepID=H7CRX8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79674.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_122_031G1_scaffold_105_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29944..30918)
DNA (975bp) protein (325aa)
Putative esterase n=2 Tax=Clostridium perfringens RepID=B1BKL5_CLOPF
Putative esterase {ECO:0000313|EMBL:EDS79666.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
esterase
L3_122_031G1_scaffold_105_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31267..31722)
DNA (456bp) protein (152aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
S-ribosylhomocysteine lyase n=6 Tax=Clostridium perfringens RepID=LUXS_CLOPE
luxS; S-ribosylhomocysteinase
L3_122_031G1_scaffold_105_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31820..32728)
DNA (909bp) protein (303aa)
Cysteine synthase family protein n=1 Tax=Clostridium perfringens F262 RepID=H7CRX5_CLOPF
Cysteine synthase family protein {ECO:0000313|EMBL:EIA18615.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
cysK; cysteine synthase
L3_122_031G1_scaffold_105_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32715..33869)
DNA (1155bp) protein (385aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:EDT15473.1}; EC=4.4.1.8 {ECO:0000313|EMBL:EDT15473.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Cystathionine beta-lyase n=2 Tax=Clostridium perfringens RepID=B1BS21_CLOPF
metB; cystathionine beta-lyase
L3_122_031G1_scaffold_105_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33933..34556)
DNA (624bp) protein (208aa)
UbiE/COQ5 family methyltransferase n=6 Tax=Clostridium perfringens RepID=H7CRX3_CLOPF
Methyltransferase, UbiE/COQ5 family {ECO:0000313|EMBL:EDT23890.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
UbiE/COQ5 family methlytransferase
Displaying items 1-30 of 82 in total

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