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L3_122_031G1_scaffold_106

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_106_1
unknown

Not on your lists

comp(1..60)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_122_031G1_scaffold_106_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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671..1288
DNA (618bp) protein (206aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=6 Tax=Citrobacter RepID=J0LXN0_9ENTR
L3_122_031G1_scaffold_106_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1526..4204)
DNA (2679bp) protein (893aa)
Aldehyde-alcohol dehydrogenase n=6 Tax=Citrobacter RepID=J1G1M5_9ENTR
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
acetaldehyde dehydrogenase
L3_122_031G1_scaffold_106_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4692..5339
DNA (648bp) protein (216aa)
UPF0056 membrane protein yhcE n=9 Tax=Citrobacter RepID=G9SK03_CITFR
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_122_031G1_scaffold_106_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6111..7742
DNA (1632bp) protein (544aa)
Oligopeptide transporter with chaperone property n=4 Tax=Citrobacter RepID=J0VQA9_9ENTR
Periplasmic oligopeptide-binding protein {ECO:0000313|EMBL:ETX71147.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
peptide ABC transporter substrate-binding protein
L3_122_031G1_scaffold_106_6
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7865..8785
DNA (921bp) protein (307aa)
Oligopeptide transport system permease protein OppB n=10 Tax=Citrobacter RepID=D4B8T6_9ENTR
Oligopeptide ABC transporter permease protein OppB {ECO:0000313|EMBL:GAL43817.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
oppB; oligopeptide transporter permease
L3_122_031G1_scaffold_106_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8800..9708
DNA (909bp) protein (303aa)
Oligopeptide transport system permease oppC n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZI7_9ENTR
Peptide ABC transporter permease {ECO:0000313|EMBL:KJC11021.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
peptide ABC transporter permease
L3_122_031G1_scaffold_106_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9720..10733
DNA (1014bp) protein (338aa)
Oligopeptide transport ATP-binding protein OppD n=5 Tax=Citrobacter RepID=G9SJZ8_CITFR
Oligopeptide transporter ATP-binding component {ECO:0000313|EMBL:KKC63817.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
oppD; oligopeptide transporter ATP-binding component
L3_122_031G1_scaffold_106_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10730..11734
DNA (1005bp) protein (335aa)
Oligopeptide transport ATP-binding protein OppF n=6 Tax=Citrobacter RepID=J0M402_9ENTR
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:ETX71143.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
peptide ABC transporter ATP-binding protein
L3_122_031G1_scaffold_106_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11780..12616
DNA (837bp) protein (279aa)
Ion transport protein n=5 Tax=Citrobacter RepID=J0VQA4_9ENTR
Transporter {ECO:0000313|EMBL:KJC11018.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
transporter
L3_122_031G1_scaffold_106_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12654..12983)
DNA (330bp) protein (110aa)
UPF0263 protein CIT292_06879 n=10 Tax=Citrobacter RepID=D4B8U1_9ENTR
dsDNA-mimic protein
UPF0263 protein P834_06860 {ECO:0000256|HAMAP-Rule:MF_00680}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L3_122_031G1_scaffold_106_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13018..14478)
DNA (1461bp) protein (487aa)
Cardiolipin synthase A {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00194234}; Short=CL synthase {ECO:0000256|HAMAP-Rule:MF_00190};; EC=2.7.8.- {ECO:0000256|HAMAP-Rule:MF_00190, ECO:0000256|SAAS:SAAS00017006};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
Cardiolipin synthase n=7 Tax=Citrobacter RepID=J0LXM0_9ENTR
cls; cardiolipin synthetase
L3_122_031G1_scaffold_106_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14621..14794
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J1G1L5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71139.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_106_14
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14845..15141)
DNA (297bp) protein (99aa)
Protein yciI n=9 Tax=Citrobacter RepID=G9SJZ2_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KKC63812.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
hypothetical protein
L3_122_031G1_scaffold_106_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15366..16085
DNA (720bp) protein (240aa)
Protein tonB n=3 Tax=Citrobacter RepID=G9SJZ1_CITFR
Energy transducer TonB {ECO:0000313|EMBL:KJC12205.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
energy transducer TonB
L3_122_031G1_scaffold_106_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16150..16551)
DNA (402bp) protein (134aa)
Thioesterase family protein n=7 Tax=Citrobacter RepID=D4B8U6_9ENTR
Acyl-CoA esterase {ECO:0000313|EMBL:KJC11014.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
acyl-CoA esterase
L3_122_031G1_scaffold_106_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16717..17256)
DNA (540bp) protein (180aa)
Probable intracellular septation protein A n=8 Tax=Citrobacter RepID=D4B8U7_9ENTR
Probable intracellular septation protein A {ECO:0000256|HAMAP-Rule:MF_00189, ECO:0000256|SAAS:SAAS00082307}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
intracellular septation protein A
L3_122_031G1_scaffold_106_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17311..18054)
DNA (744bp) protein (248aa)
UPF0259 membrane protein HMPREF9428_01526 n=7 Tax=Citrobacter RepID=G9SJY8_CITFR
UPF0259 membrane protein P834_06852 {ECO:0000256|HAMAP-Rule:MF_01067}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_106_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18453..19091
DNA (639bp) protein (213aa)
Outer membrane protein W n=2 Tax=Citrobacter freundii RepID=G9SJY7_CITFR
Outer membrane protein W {ECO:0000313|EMBL:ETX71132.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_122_031G1_scaffold_106_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19659..20375
DNA (717bp) protein (239aa)
Probable transcriptional regulatory protein n=7 Tax=Citrobacter RepID=G9SJY6_CITFR
Probable transcriptional regulatory protein TN42_07685 {ECO:0000256|HAMAP-Rule:MF_00918}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
yeeN; hypothetical protein
L3_122_031G1_scaffold_106_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20448..20729)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BLX8_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC11009.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L3_122_031G1_scaffold_106_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21146..21421
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=J0M3V0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71129.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_106_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21608..23080
DNA (1473bp) protein (491aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QM52_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX71128.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
diguanylate cyclase
L3_122_031G1_scaffold_106_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23113..23919)
DNA (807bp) protein (269aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Tryptophan synthase alpha chain n=6 Tax=Citrobacter RepID=J1G1K5_9ENTR
tryptophan synthase subunit alpha
L3_122_031G1_scaffold_106_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23919..25112)
DNA (1194bp) protein (398aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNL2_CITFR
L3_122_031G1_scaffold_106_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25123..26481)
DNA (1359bp) protein (453aa)
Indole-3-glycerol phosphate synthase {ECO:0000313|EMBL:KJC12204.1}; EC=4.1.1.48 {ECO:0000313|EMBL:KJC12204.1};; EC=5.3.1.24 {ECO:0000313|EMBL:KJC12204.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
indole-3-glycerol phosphate synthase (EC:4.1.1.48 5.3.1.24)
Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase n=2 Tax=Citrobacter RepID=K8QWQ0_CITFR
L3_122_031G1_scaffold_106_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26485..28080)
DNA (1596bp) protein (532aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
glutamine amidotransferase (EC:2.4.2.18 4.1.3.27)
Anthranilate synthase component II n=9 Tax=Enterobacteriaceae RepID=G9SJX9_CITFR
L3_122_031G1_scaffold_106_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28080..29642)
DNA (1563bp) protein (521aa)
Anthranilate synthase component 1 {ECO:0000256|PIRNR:PIRNR001373}; EC=4.1.3.27 {ECO:0000256|PIRNR:PIRNR001373};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Anthranilate synthase component 1 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZG7_9ENTR
hypothetical protein
L3_122_031G1_scaffold_106_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29917..30795
DNA (879bp) protein (293aa)
Protein trpH n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW62_9ENTR
S-adenosylmethionine tRNA ribosyltransferase {ECO:0000313|EMBL:KJC12174.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
S-adenosylmethionine tRNA ribosyltransferase
L3_122_031G1_scaffold_106_30
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30792..31412
DNA (621bp) protein (207aa)
Sua5/YciO/YrdC/YwlC family protein n=7 Tax=Citrobacter RepID=D4B8W0_9ENTR
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EFE09622.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter youngae ATCC 29220.;"
hypothetical protein
Displaying items 1-30 of 97 in total

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