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L3_122_031G1_scaffold_146

Search features with annotation key words

Displaying items 1-30 of 137 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_146_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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121..1704
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H276_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96518.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sigma-54 interaction domain protein
L3_122_031G1_scaffold_146_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1767..3161)
DNA (1395bp) protein (465aa)
aspB; aspartase (EC:4.3.1.1)
Aspartate ammonia-lyase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBW5_9CLOT
Aspartate ammonia-lyase {ECO:0000313|EMBL:EEH96517.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_122_031G1_scaffold_146_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3447..4739)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9XV08_9CLOT
dipeptidase family protein
Dipeptidase family protein {ECO:0000313|EMBL:AIY84509.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_122_031G1_scaffold_146_4
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4765..5286)
DNA (522bp) protein (174aa)
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B n=1 Tax=Clostridium colicanis 209318 RepID=N9WKB9_9CLOT
Glycine/betaine/sarcosine/D-proline reductase family selenoprotein B {ECO:0000313|EMBL:ENZ03551.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
selenoB, glycine/betaine/sarcosine/D-proline reductase family protein
L3_122_031G1_scaffold_146_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5305..6654)
DNA (1350bp) protein (450aa)
celB; PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=1 Tax=Clostridium colicanis 209318 RepID=N9WKZ3_9CLOT
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L3_122_031G1_scaffold_146_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6691..7014)
DNA (324bp) protein (108aa)
licB4; PTS system, Lactose/Cellobiose specific IIB subunit (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y5S1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03549.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
L3_122_031G1_scaffold_146_7
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7345..7968)
DNA (624bp) protein (208aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=1231072 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani 12124569.;"
Thiamine-phosphate synthase n=1 Tax=Clostridium tetani 12124569 RepID=U6EWW6_CLOTA
thiamin-phosphate pyrophosphorylase
L3_122_031G1_scaffold_146_8
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7955..8788)
DNA (834bp) protein (278aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hydroxyethylthiazole kinase (EC:2.7.1.50)
Hydroxyethylthiazole kinase n=1 Tax=Clostridium intestinale URNW RepID=U2NSB6_9CLOT
L3_122_031G1_scaffold_146_9
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8788..9612)
DNA (825bp) protein (275aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:ADL53039.1}; EC=2.7.4.7 {ECO:0000313|EMBL:ADL53039.1};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Phosphomethylpyrimidine kinase n=3 Tax=Clostridium cellulovorans RepID=D9SV65_CLOC7
L3_122_031G1_scaffold_146_10
Thermosipho africanus, Thermosipho, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

9928..10092
DNA (165bp) protein (55aa)
Rubredoxin n=2 Tax=Thermosipho africanus RepID=B7IDE7_THEAB
rubredoxin
Rubredoxin {ECO:0000256|PIRNR:PIRNR000071}; TaxID=484019 species="Bacteria; Thermotogae; Thermotogales; Fervidobacteriaceae; Thermosipho.;" source="Thermosipho africanus (strain TCF52B).;"
L3_122_031G1_scaffold_146_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10196..11545
DNA (1350bp) protein (450aa)
4Fe-4S binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QM12_9CLOT
4Fe-4S binding domain protein {ECO:0000313|EMBL:EKY28750.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
[Fe] hydrogenase
L3_122_031G1_scaffold_146_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11584..12507)
DNA (924bp) protein (308aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QFM1_9CLOT
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EKY26377.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative transcriptional regulator
L3_122_031G1_scaffold_146_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12577..13206)
DNA (630bp) protein (210aa)
Phosphatase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0M9_9CLOT
Phosphatase {ECO:0000313|EMBL:EOR20776.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
phosphatase
L3_122_031G1_scaffold_146_14
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13231..14580)
DNA (1350bp) protein (450aa)
Radical SAM domain protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SV04_CLOC7
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ADL52979.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_122_031G1_scaffold_146_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14665..15180)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HD81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH97315.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
GCN5-like N-acetyltransferase
L3_122_031G1_scaffold_146_16
unknown

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15199..15402
DNA (204bp) protein (68aa)

This feature has no annotations

L3_122_031G1_scaffold_146_17
unknown

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comp(15536..15763)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_122_031G1_scaffold_146_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15944..16906
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BTN8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14967.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_031G1_scaffold_146_19
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16985..17737)
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta pleomorpha (strain ATCC BAA-1885 / DSM 22778 / Grapes) RepID=G8QQH7_SPHPG
Uncharacterized protein {ECO:0000313|EMBL:KJU73031.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
L3_122_031G1_scaffold_146_20
unknown

Not on your lists

comp(17758..18105)
DNA (348bp) protein (116aa)

This feature has no annotations

L3_122_031G1_scaffold_146_21
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18171..18989)
DNA (819bp) protein (273aa)
Acetyltransferase GNAT family protein n=1 Tax=Haloplasma contractile SSD-17B RepID=F7PVV2_9BACT
GNAT family acetyltransferase {ECO:0000313|EMBL:ETT65984.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
L3_122_031G1_scaffold_146_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19250..20386)
DNA (1137bp) protein (379aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum F RepID=A7GBB2_CLOBL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS39573.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L3_122_031G1_scaffold_146_23
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20407..21039)
DNA (633bp) protein (211aa)
CAAX amino terminal protease family protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TAU6_9FIRM
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EGL38533.1}; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas sp. oral taxon 110 str. F0139.;"
CAAX protease
L3_122_031G1_scaffold_146_24
Desulfitobacterium dehalogenans, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21125..21637
DNA (513bp) protein (171aa)
Transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A894_DESDJ
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AFM00179.1}; TaxID=756499 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 /; JW/IU-DC1).;"
L3_122_031G1_scaffold_146_25
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21742..23493
DNA (1752bp) protein (584aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YUF0_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94520.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
multidrug ABC transporter ATPase/permease
L3_122_031G1_scaffold_146_26
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23486..25396
DNA (1911bp) protein (637aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Clostridium sp. D5 RepID=F0YUF1_9CLOT
ABC transporter, permease/ATP-binding protein {ECO:0000313|EMBL:EGB94521.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC transporter
L3_122_031G1_scaffold_146_27
unknown

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25512..25793
DNA (282bp) protein (94aa)

This feature has no annotations

L3_122_031G1_scaffold_146_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25908..26672)
DNA (765bp) protein (255aa)
Ferredoxin n=2 Tax=Clostridium botulinum B RepID=B2TPS9_CLOBB
ferredoxin
Ferredoxin {ECO:0000313|EMBL:ACD22373.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_122_031G1_scaffold_146_29
Reinekea blandensis, Reinekea, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26895..27446)
DNA (552bp) protein (184aa)
Acetyltransferase (Isoleucine patch superfamily) protein n=1 Tax=Reinekea blandensis MED297 RepID=A4BCD3_9GAMM
Acetyltransferase (Isoleucine patch superfamily) protein {ECO:0000313|EMBL:EAR10199.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;"
hypothetical protein
L3_122_031G1_scaffold_146_30
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27484..28488)
DNA (1005bp) protein (335aa)
Aminoglycoside phosphotransferase n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU21_9CLOT
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:EET87221.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
aminoglycoside phosphotransferase
Displaying items 1-30 of 137 in total

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