ggKbase home page

L3_122_031G1_scaffold_152

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_152_1
unknown

Not on your lists

comp(1..66)
DNA (66bp) protein (22aa)

This feature has no annotations

L3_122_031G1_scaffold_152_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(318..1091)
DNA (774bp) protein (258aa)
ABC transporter n=2 Tax=Citrobacter RepID=K8QY24_CITFR
ABC transporter family protein {ECO:0000313|EMBL:KEL81942.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
arginine ABC transporter ATP-binding protein
L3_122_031G1_scaffold_152_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1075..2001)
DNA (927bp) protein (309aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CNL4_CITFR
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC11219.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
amino acid ABC transporter permease
L3_122_031G1_scaffold_152_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2011..2520)
DNA (510bp) protein (170aa)
N-acetyltransferase GCN5 n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QUM4_CITFR
Acetyltransferase family protein {ECO:0000313|EMBL:KEL81940.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
acetyltransferase
L3_122_031G1_scaffold_152_5
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2531..3463)
DNA (933bp) protein (311aa)
Extracellular solute-binding protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D7A1_CITFR
ABC transporter substrate-binding protein
Putative amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:GAL44002.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L3_122_031G1_scaffold_152_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3476..4789)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8R2M7_CITFR
Monooxygenase {ECO:0000313|EMBL:KJC11222.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
monooxygenase
L3_122_031G1_scaffold_152_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4815..5936)
DNA (1122bp) protein (374aa)
Amidohydrolase n=3 Tax=Citrobacter RepID=J0M3G0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL81937.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hydrolase
L3_122_031G1_scaffold_152_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5936..6934)
DNA (999bp) protein (333aa)
Protein YtmO n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CNL8_CITFR
Luciferase {ECO:0000313|EMBL:ETX70973.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
alkane 1-monooxygenase
L3_122_031G1_scaffold_152_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7442..8983
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BP80_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX70974.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
chemotaxis protein
L3_122_031G1_scaffold_152_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9263..10705
DNA (1443bp) protein (481aa)
L-asparagine permease n=2 Tax=Citrobacter RepID=M3D7A5_CITFR
L-asparagine permease {ECO:0000313|EMBL:KJC11226.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
L-asparagine permease
L3_122_031G1_scaffold_152_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10747..10968)
DNA (222bp) protein (74aa)
Lipoprotein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DWY4_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL81933.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lipoprotein
L3_122_031G1_scaffold_152_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11106..12167)
DNA (1062bp) protein (354aa)
Periplasmic protein n=5 Tax=Citrobacter RepID=J0M3G5_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70977.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_152_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12432..13466)
DNA (1035bp) protein (345aa)
Oxidoreductase, Zn-dependent and NAD(P)-binding n=1 Tax=Citrobacter sp. KTE30 RepID=R8UZ27_9ENTR
Zinc-binding dehydrogenase family protein {ECO:0000313|EMBL:KEL81931.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
NADP-dependent oxidoreductase
L3_122_031G1_scaffold_152_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13525..14100)
DNA (576bp) protein (192aa)
Toxin-antitoxin antitoxin xre family n=6 Tax=Citrobacter RepID=J0LX36_9ENTR
Transcriptional regulator {ECO:0000313|EMBL:CDL40494.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
LacI family transcriptional regulator
L3_122_031G1_scaffold_152_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14138..14656
DNA (519bp) protein (173aa)
Acetyltransferase n=2 Tax=Citrobacter RepID=K8QWA0_CITFR
Acetyltransferase family protein {ECO:0000313|EMBL:KEL81929.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
acetyltransferase
L3_122_031G1_scaffold_152_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14653..15102
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8R2L0_CITFR
Membrane protein {ECO:0000313|EMBL:KJC06174.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ydcZ; putative inner membrane protein
L3_122_031G1_scaffold_152_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15163..15396)
DNA (234bp) protein (78aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M4S0_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL40491.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L3_122_031G1_scaffold_152_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15414..17012)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R6J7_CITFR
Bacterial extracellular solute-binding s, 5 Middle family protein {ECO:0000313|EMBL:KEL81926.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
peptide ABC transporter substrate-binding protein
L3_122_031G1_scaffold_152_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17295..18602
DNA (1308bp) protein (436aa)
Ssrab activated protein n=3 Tax=Citrobacter RepID=J0LX40_9ENTR
SsrAB activated protein {ECO:0000313|EMBL:KJC11235.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ssrAB activated protein
L3_122_031G1_scaffold_152_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18607..21588
DNA (2982bp) protein (994aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3D7B7_CITFR
Virulence factor SrfB family protein {ECO:0000313|EMBL:KEL81924.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
virulence factor SrfB
L3_122_031G1_scaffold_152_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21585..23747
DNA (2163bp) protein (721aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DWZ6_CITFR
Virulence effector SrfC {ECO:0000313|EMBL:KJC06179.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
virulence effector SrfC
L3_122_031G1_scaffold_152_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23767..23940)
DNA (174bp) protein (58aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M4S5_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX70987.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_152_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24349..25149)
DNA (801bp) protein (267aa)
AraC/XylS family transcriptional regulator n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CNN0_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC11357.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AraC family transcriptional regulator
L3_122_031G1_scaffold_152_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25230..26357
DNA (1128bp) protein (376aa)
Multidrug resistance protein n=2 Tax=Citrobacter freundii RepID=K8QUG4_CITFR
Major facilitator transporter {ECO:0000313|EMBL:KJC11358.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
major facilitator transporter
L3_122_031G1_scaffold_152_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26551..27978)
DNA (1428bp) protein (476aa)
Gamma-aminobutyraldehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; EC=1.2.1.19 {ECO:0000256|HAMAP-Rule:MF_01275};; 1-pyrroline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; 4-aminobutanal dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01275}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
gamma-aminobutyraldehyde dehydrogenase (EC:1.2.1.19)
Gamma-aminobutyraldehyde dehydrogenase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UUS0_9ENTR
L3_122_031G1_scaffold_152_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28000..28806)
DNA (807bp) protein (269aa)
Inner membrane ABC transporter permease ydcV n=8 Tax=Citrobacter RepID=C1M4T0_9ENTR
spermidine/putrescine ABC transporter permease
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:AHY13381.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_122_031G1_scaffold_152_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28796..29740)
DNA (945bp) protein (315aa)
ABC transporter n=4 Tax=Citrobacter RepID=J1G196_9ENTR
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC11240.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
spermidine/putrescine ABC transporter permease
L3_122_031G1_scaffold_152_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29741..30757)
DNA (1017bp) protein (339aa)
Abc transporter family protein n=6 Tax=Citrobacter RepID=J0VPP5_9ENTR
Spermidine/putrescine transport system ATP-binding protein {ECO:0000313|EMBL:ETX70991.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
polyamine ABC transporter ATP-binding protein
L3_122_031G1_scaffold_152_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30774..31919)
DNA (1146bp) protein (382aa)
Bacterial extracellular solute-binding family protein n=6 Tax=Citrobacter RepID=J0M3H7_9ENTR
Bacterial extracellular solute-binding family protein {ECO:0000313|EMBL:KEL81916.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
spermidine/putrescine ABC transporter substrate-binding protein
L3_122_031G1_scaffold_152_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32248..33657)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QW84_CITFR
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC11243.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
GntR family transcriptional regulator
Displaying items 1-30 of 70 in total

View Taxonomy