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L3_122_031G1_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_154_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(304..1668)
DNA (1365bp) protein (455aa)
RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2A1_CLOBU
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:ENZ30618.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_122_031G1_scaffold_154_2

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comp(1702..1797)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACX9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16584.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_122_031G1_scaffold_154_3

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comp(1810..2172)
DNA (363bp) protein (121aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8K9R0_CLOBU
Nucleotidyltransferase family protein {ECO:0000313|EMBL:ETJ16585.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_122_031G1_scaffold_154_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2679..4100)
DNA (1422bp) protein (474aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
pyk; pyruvate kinase Pyk (EC:2.7.1.40)
Pyruvate kinase n=4 Tax=Clostridium butyricum RepID=B1QWI8_CLOBU
L3_122_031G1_scaffold_154_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4312..5268)
DNA (957bp) protein (319aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
pfkA2; 6-phosphofructokinase PfkA (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AER7_CLOBU
L3_122_031G1_scaffold_154_6

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comp(5800..6984)
DNA (1185bp) protein (395aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=2 Tax=Clostridium butyricum RepID=B1QWJ0_CLOBU
DNA polymerase III, alpha subunit {ECO:0000313|EMBL:ETJ16588.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_122_031G1_scaffold_154_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7321..8229)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ACY5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94673.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
LAGLIDADG-like domain protein
L3_122_031G1_scaffold_154_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8285..9253)
DNA (969bp) protein (323aa)
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YT71_CLOBU
DNA polymerase III, alpha subunit {ECO:0000313|EMBL:ENZ30625.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_122_031G1_scaffold_154_9
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9697..10515)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8KHZ1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ94674.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
L3_122_031G1_scaffold_154_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10560..11828)
DNA (1269bp) protein (423aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AES4_CLOBU
L3_122_031G1_scaffold_154_11
unknown

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12438..12698
DNA (261bp) protein (87aa)

This feature has no annotations

L3_122_031G1_scaffold_154_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12756..13040
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2B1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85788.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_122_031G1_scaffold_154_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13315..13599)
DNA (285bp) protein (95aa)
Stress responsive alpha-beta barrel domain protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K9Q1_CLOBU
Dabb {ECO:0000313|EMBL:KJZ85698.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
stress responsive A/B barrel domain-containing protein
L3_122_031G1_scaffold_154_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13775..14716)
DNA (942bp) protein (314aa)
Putative sporulation transcription regulator WhiA n=4 Tax=Clostridium butyricum RepID=B1QWJ7_CLOBU
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
whiA; putative sporulation transcription regulator WhiA
L3_122_031G1_scaffold_154_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14739..16094)
DNA (1356bp) protein (452aa)
Putative gluconeogenesis factor n=2 Tax=Clostridium butyricum RepID=M8JE07_CLOBU
Putative gluconeogenesis factor {ECO:0000256|HAMAP-Rule:MF_00973}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_122_031G1_scaffold_154_16

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comp(16043..16975)
DNA (933bp) protein (311aa)
UPF0042 nucleotide-binding protein CBY_1836 n=4 Tax=Clostridium butyricum RepID=B1QWJ9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ16595.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_031G1_scaffold_154_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17290..18204)
DNA (915bp) protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A2B6_CLOBU
murB; UDP-N-acetylenolpyruvoylglucosamine reductase MurB
L3_122_031G1_scaffold_154_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18420..20300)
DNA (1881bp) protein (627aa)
UvrABC system protein C n=2 Tax=Clostridium butyricum RepID=M8K9P6_CLOBU
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uvrC; UvrABC system protein C
L3_122_031G1_scaffold_154_19

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comp(20534..22009)
DNA (1476bp) protein (492aa)
Penicillin-binding protein n=3 Tax=Clostridium butyricum RepID=B1QWK2_CLOBU
Penicillin-binding protein {ECO:0000313|EMBL:ETJ16598.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
peptidoglycan glycosyltransferase
L3_122_031G1_scaffold_154_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22011..23231)
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSR1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85744.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rodA; FtsW-like protein RodA
L3_122_031G1_scaffold_154_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23433..23876)
DNA (444bp) protein (148aa)
FHA-domain containing secreted protein n=3 Tax=Clostridium butyricum RepID=B1QWK4_CLOBU
FHA-domain containing secreted protein {ECO:0000313|EMBL:KJZ85765.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
FHA domain-containing protein
L3_122_031G1_scaffold_154_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23979..26801)
DNA (2823bp) protein (941aa)
UvrABC system protein A n=2 Tax=Clostridium butyricum RepID=M8JN72_CLOBU
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
uvrA; UvrABC system protein A
L3_122_031G1_scaffold_154_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26981..28954)
DNA (1974bp) protein (658aa)
UvrABC system protein B n=3 Tax=Clostridium butyricum RepID=B1QWK6_CLOBU
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
uvrB; UvrABC system protein B
L3_122_031G1_scaffold_154_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29168..30466)
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YT92_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30640.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
C-terminal PDZ domain-containing protein
L3_122_031G1_scaffold_154_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30487..31752)
DNA (1266bp) protein (422aa)
ctpA; carboxy-terminal processing protease CtpA (EC:3.4.21.102)
C-terminal processing peptidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YSR8_CLOBU
C-terminal processing peptidase {ECO:0000313|EMBL:ENZ30641.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_122_031G1_scaffold_154_26

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comp(31896..32786)
DNA (891bp) protein (297aa)
Cell division protein FtsX n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AEU4_CLOBU
Efflux ABC transporter, permease protein, FtsX family {ECO:0000313|EMBL:ETJ16605.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_031G1_scaffold_154_27

Not on your lists

comp(32776..33462)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=3 Tax=Clostridium butyricum RepID=B1QWL0_CLOBU
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:ETJ16606.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
cell division ATP-binding protein FtsE
L3_122_031G1_scaffold_154_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33672..34526)
DNA (855bp) protein (285aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AD07_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85753.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yvjA; UPF0750 membrane protein YvjA
L3_122_031G1_scaffold_154_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34891..35835)
DNA (945bp) protein (315aa)
Transketolase, C-terminal section {ECO:0000313|EMBL:KJZ85748.1}; EC=2.2.1.1 {ECO:0000313|EMBL:KJZ85748.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Transketolase, pyridine binding subunit n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KHX4_CLOBU
transketolase
L3_122_031G1_scaffold_154_30
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35835..36656)
DNA (822bp) protein (274aa)
DNA polymerase I {ECO:0000313|EMBL:KJZ94703.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KJZ94703.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative transketolase N-terminal section (EC:2.2.1.1)
Transketolase n=4 Tax=Clostridium butyricum RepID=B1QWL3_CLOBU
Displaying items 1-30 of 72 in total

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