ggKbase home page

L3_122_031G1_scaffold_159

Search features with annotation key words

Displaying items 1-30 of 81 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_159_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(416..1444)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=4 Tax=Salmonella enterica I RepID=V1HSR7_SALVI
Uncharacterized protein {ECO:0000313|EMBL:ETX65566.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L3_122_031G1_scaffold_159_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1735..2055)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3718-1 RepID=T9UF68_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ERA11401.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
hypothetical protein
L3_122_031G1_scaffold_159_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2688..3902
DNA (1215bp) protein (405aa)
Prophage integrase n=2 Tax=Escherichia coli RepID=E3PEI6_ECOH1
prophage integrase
Prophage integrase {ECO:0000313|EMBL:CBI99820.1}; TaxID=316401 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O78:H11 (strain H10407 / ETEC).;"
L3_122_031G1_scaffold_159_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4554..4757
DNA (204bp) protein (68aa)
Transcriptional regulator, AlpA family n=60 Tax=Escherichia coli RepID=C2DM76_ECOLX
putative prophage transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EQX78502.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L3_122_031G1_scaffold_159_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4757..5188
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=D7YGG7_ECOLX
Prophage protein {ECO:0000313|EMBL:AIX65597.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
putative prophage protein
L3_122_031G1_scaffold_159_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5201..6034
DNA (834bp) protein (278aa)
AntA/AntB antirepressor family protein n=2 Tax=Escherichia coli RepID=N2QRY0_ECOLX
AntA/AntB antirepressor family protein {ECO:0000313|EMBL:ENB14040.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
hypothetical protein
L3_122_031G1_scaffold_159_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6027..6209
DNA (183bp) protein (61aa)
Uncharacterized protein n=16 Tax=Escherichia coli RepID=S0TFW1_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA69012.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
putative prophage protein
L3_122_031G1_scaffold_159_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6865..7059
DNA (195bp) protein (65aa)
Uncharacterized protein n=61 Tax=Enterobacteriaceae RepID=K0WQ46_SHIFL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX22005.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_122_031G1_scaffold_159_9
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7052..7270
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=T6P8W1_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFW51236.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L3_122_031G1_scaffold_159_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7263..7457
DNA (195bp) protein (65aa)
Uncharacterized protein n=51 Tax=Enterobacteriaceae RepID=H4Z2Y2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENB14043.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
putative prophage protein
L3_122_031G1_scaffold_159_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7454..7717
DNA (264bp) protein (88aa)
Uncharacterized protein n=41 Tax=Enterobacteriaceae RepID=G1YZP7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA69015.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
putative prophage protein
L3_122_031G1_scaffold_159_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7714..7935
DNA (222bp) protein (74aa)
Uncharacterized protein n=183 Tax=Enterobacteriaceae RepID=B2TTW7_SHIB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQQ16120.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_122_031G1_scaffold_159_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7928..8530
DNA (603bp) protein (201aa)
Uncharacterized protein n=10 Tax=Escherichia coli RepID=D8ABY7_ECOLX
Putative prophage protein {ECO:0000313|EMBL:ENB14046.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
hypothetical protein
L3_122_031G1_scaffold_159_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8543..11299
DNA (2757bp) protein (919aa)
Toprim domain protein n=3 Tax=Escherichia coli RepID=N2QX55_ECOLX
Toprim domain protein {ECO:0000313|EMBL:ENB14047.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
putative prophage DNA primase
L3_122_031G1_scaffold_159_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11884..12057
DNA (174bp) protein (58aa)
Prophage protein n=66 Tax=Escherichia RepID=E3PEJ9_ECOH1
prophage protein
Uncharacterized protein {ECO:0000313|EMBL:ENA27678.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L3_122_031G1_scaffold_159_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12062..13528
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Escherichia coli KOEGE 40 (102a) RepID=T8F6S5_ECOLX
Putative dNA transfer protein p33 {ECO:0000313|EMBL:ENB14050.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
putative prophage DNA transfer protein
L3_122_031G1_scaffold_159_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13528..15633
DNA (2106bp) protein (702aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=S0ZJT2_ECOLX
Putative injection protein {ECO:0000313|EMBL:ENB14051.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
putative phage DNA transfer protein
L3_122_031G1_scaffold_159_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15693..16130)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI000368778A
Uncharacterized protein {ECO:0000313|EMBL:KHH04286.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_122_031G1_scaffold_159_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16443..16544
DNA (102bp) protein (34aa)
Uncharacterized protein n=85 Tax=Enterobacteriaceae RepID=C1HSR0_9ESCH
Uncharacterized protein {ECO:0000313|EMBL:EMV52583.1}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L3_122_031G1_scaffold_159_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16923..17360)
DNA (438bp) protein (146aa)
Uncharacterized protein n=19 Tax=Escherichia coli RepID=C2DM55_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOW10797.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
hypothetical protein
L3_122_031G1_scaffold_159_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17373..18329)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Escherichia coli 2875150 RepID=N2QSM5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW10798.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_122_031G1_scaffold_159_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18946..19227
DNA (282bp) protein (94aa)
PerC transcriptional activator n=33 Tax=Escherichia coli RepID=E0QWU8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EQQ16135.1}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
transcriptional regulator
L3_122_031G1_scaffold_159_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19831..20373
DNA (543bp) protein (181aa)
Uncharacterized protein n=35 Tax=Escherichia coli RepID=C8UI81_ECO1A
prophage protein
Uncharacterized protein {ECO:0000313|EMBL:EQY91771.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_122_031G1_scaffold_159_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20366..20725)
DNA (360bp) protein (120aa)
Uncharacterized protein n=8 Tax=Escherichia coli RepID=E3PEK8_ECOH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW10801.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_122_031G1_scaffold_159_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21069..21479)
DNA (411bp) protein (137aa)
Predicted transcriptional regulator n=7 Tax=Escherichia coli RepID=C6EA41_ECOBD
hypothetical protein
GyagP {ECO:0000313|EMBL:EGB67666.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L3_122_031G1_scaffold_159_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21458..22414)
DNA (957bp) protein (319aa)
Conserved protein n=2 Tax=Escherichia coli RepID=C6EA40_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT30374.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_159_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22424..24622)
DNA (2199bp) protein (733aa)
Aldehyde ferredoxin oxidoreductase: molybdenum cofactor-binding subunit, subunit of aldehyde ferredoxin oxidoreductase n=4 Tax=Escherichia coli RepID=C6EA39_ECOBD
aldehyde oxidase and xanthine dehydrogenase molybdopterin binding
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding {ECO:0000313|EMBL:ACT30373.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_159_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24619..25575)
DNA (957bp) protein (319aa)
Aldehyde ferredoxin oxidoreductase, FAD-binding subunit, subunit of aldehyde ferredoxin oxidoreductase n=10 Tax=Escherichia coli RepID=C6EA38_ECOBD
molybdopterin dehydrogenase FAD-binding
Oxidoreductase with FAD-binding domain-containing protein {ECO:0000313|EMBL:ERA11411.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_122_031G1_scaffold_159_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25572..26261)
DNA (690bp) protein (230aa)
(2Fe-2S)-binding domain protein n=18 Tax=Escherichia coli RepID=C6EA37_ECOBD
(2Fe-2S)-binding domain-containing protein
Aldehyde oxidoreductase {ECO:0000313|EMBL:KFD77066.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_159_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26815..27291
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Escherichia coli O32:H37 str. P4 RepID=I2I4V5_ECOLX
hypothetical protein
PF07274 family protein {ECO:0000313|EMBL:EII19870.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
Displaying items 1-30 of 81 in total

View Taxonomy