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L3_122_031G1_scaffold_171

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Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_171_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..526
DNA (525bp) protein (175aa)
30S ribosomal protein S1 n=1 Tax=Escherichia coli P02997067.6 RepID=N3AQI5_ECOLX
rpsA; 30S ribosomal protein S1
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1281024 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 87 (4-5977630).;"
L3_122_031G1_scaffold_171_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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686..970
DNA (285bp) protein (95aa)
Integration host factor subunit beta n=1416 Tax=Enterobacteriaceae RepID=IHFB_ECO24
ihfB; integration host factor (IHF), DNA-binding protein, beta subunit
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1446704 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O174:H8 str. 04-3038.;"
L3_122_031G1_scaffold_171_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1178..3442
DNA (2265bp) protein (755aa)
Uncharacterized protein YcaI n=127 Tax=Escherichia RepID=YCAI_ECOLI
DNA internalization competence protein ComEC/Rec2-like protein {ECO:0000313|EMBL:ESE07360.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
hypothetical protein
L3_122_031G1_scaffold_171_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3479..5227
DNA (1749bp) protein (583aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
Lipid A export ATP-binding/permease protein MsbA n=843 Tax=Bacteria RepID=MSBA_ECO57
lipid transporter ATP-binding/permease
L3_122_031G1_scaffold_171_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5224..6210
DNA (987bp) protein (329aa)
tetraacyldisaccharide 4'-kinase (EC:2.7.1.130)
Tetraacyldisaccharide 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093884}; EC=2.7.1.130 {ECO:0000256|HAMAP-Rule:MF_00409, ECO:0000256|SAAS:SAAS00093878};; Lipid A 4'-kinase {ECO:0000256|HAMAP-Rule:MF_00409}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
Tetraacyldisaccharide 4'-kinase n=124 Tax=Escherichia RepID=LPXK_ECOLI
L3_122_031G1_scaffold_171_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6247..7479
DNA (1233bp) protein (411aa)
Uncharacterized protein YcaQ n=138 Tax=Enterobacteriaceae RepID=YCAQ_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHV62817.1}; TaxID=868161 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC6B.;"
L3_122_031G1_scaffold_171_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7531..7713
DNA (183bp) protein (61aa)
UPF0434 protein YcaR n=1342 Tax=Enterobacteriaceae RepID=YCAR_ECO24
hypothetical protein
UPF0434 protein YcaR {ECO:0000256|HAMAP-Rule:MF_01187}; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
L3_122_031G1_scaffold_171_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7710..8456
DNA (747bp) protein (249aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=166 Tax=Enterobacteriaceae RepID=KDSB_ECOBW
kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase
L3_122_031G1_scaffold_171_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8610..9503
DNA (894bp) protein (298aa)
Uncharacterized protein YcbJ n=877 Tax=Enterobacteriaceae RepID=YCBJ_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELI32156.1}; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
L3_122_031G1_scaffold_171_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9480..10259)
DNA (780bp) protein (260aa)
Uncharacterized protein YcbC n=695 Tax=cellular organisms RepID=YCBC_ECO57
hypothetical protein
Inner membrane protein {ECO:0000313|EMBL:EOU92673.1}; TaxID=1169354 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE37.;"
L3_122_031G1_scaffold_171_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10395..11180
DNA (786bp) protein (262aa)
Protein SmtA n=577 Tax=Enterobacteriaceae RepID=SMTA_ECOLI
putative metallothionein SmtA
Protein smtA {ECO:0000313|EMBL:EOV64211.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_122_031G1_scaffold_171_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11177..12499
DNA (1323bp) protein (441aa)
Chromosome partition protein MukF n=683 Tax=Enterobacteriaceae RepID=MUKF_ECO24
chromosome partition protein MukF
Chromosome partition protein MukF {ECO:0000256|HAMAP-Rule:MF_01803, ECO:0000256|SAAS:SAAS00085357}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
L3_122_031G1_scaffold_171_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12480..13184
DNA (705bp) protein (235aa)
Chromosome partition protein MukE n=561 Tax=Enterobacteriaceae RepID=MUKE_ECOLI
condesin subunit E
Chromosome partition protein MukE {ECO:0000256|HAMAP-Rule:MF_01802}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_122_031G1_scaffold_171_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13184..17644
DNA (4461bp) protein (1487aa)
Chromosome partition protein MukB n=37 Tax=Escherichia coli RepID=MUKB_ECOLC
Chromosome partition protein MukB {ECO:0000256|HAMAP-Rule:MF_01800, ECO:0000256|SAAS:SAAS00054219}; Structural maintenance of chromosome-related protein {ECO:0000256|HAMAP-Rule:MF_01800}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
mukB; cell division protein MukB
L3_122_031G1_scaffold_171_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17905..19752
DNA (1848bp) protein (616aa)
Peptidoglycan-binding domain 1 protein n=121 Tax=Escherichia RepID=B1IW06_ECOLC
Putative L,D-transpeptidase YcbB {ECO:0000313|EMBL:KDZ16843.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
hypothetical protein
L3_122_031G1_scaffold_171_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19933..20481
DNA (549bp) protein (183aa)
Uncharacterized protein YcbK n=1401 Tax=Enterobacteriaceae RepID=YCBK_ECO57
ycbK; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ44135.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_122_031G1_scaffold_171_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20508..21155
DNA (648bp) protein (216aa)
Uncharacterized protein YcbL n=140 Tax=Escherichia RepID=YCBL_ECOLI
hypothetical protein
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:KEO00551.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L3_122_031G1_scaffold_171_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21377..22567)
DNA (1191bp) protein (397aa)
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:KDY96657.1}; EC=2.6.1.1 {ECO:0000313|EMBL:KDY96657.1};; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
Aspartate aminotransferase n=711 Tax=Enterobacteriaceae RepID=AAT_ECOLI
L3_122_031G1_scaffold_171_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22752..23840)
DNA (1089bp) protein (363aa)
Outer membrane protein F n=466 Tax=Enterobacteriaceae RepID=OMPF_ECOLI
outer membrane protein F
Outer membrane protein {ECO:0000313|EMBL:ESA60538.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_122_031G1_scaffold_171_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24443..25843)
DNA (1401bp) protein (467aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
Asparagine--tRNA ligase n=1040 Tax=Enterobacteriaceae RepID=SYN_ECO24
L3_122_031G1_scaffold_171_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26012..27214)
DNA (1203bp) protein (401aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838};; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
Nicotinate phosphoribosyltransferase n=363 Tax=Enterobacteriaceae RepID=PNCB_ECO24
L3_122_031G1_scaffold_171_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27480..30092
DNA (2613bp) protein (871aa)
pepN; aminopeptidase N (EC:3.4.11.2)
Aminopeptidase N {ECO:0000313|EMBL:ENB29860.1}; EC=3.4.11.2 {ECO:0000313|EMBL:ENB29860.1};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
Aminopeptidase N n=143 Tax=Escherichia RepID=AMPN_ECOLI
L3_122_031G1_scaffold_171_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30135..30902)
DNA (768bp) protein (256aa)
Aliphatic sulfonates import ATP-binding protein SsuB {ECO:0000256|HAMAP-Rule:MF_01724}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01724};; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
Aliphatic sulfonates import ATP-binding protein SsuB n=452 Tax=Escherichia RepID=SSUB_ECO57
ssuB; ABC transporter ATP-binding protein
L3_122_031G1_scaffold_171_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(30899..31690)
DNA (792bp) protein (264aa)
Putative aliphatic sulfonates transport permease protein SsuC n=549 Tax=Enterobacteriaceae RepID=SSUC_ECOLI
ssuC; alkanesulfonate transporter permease
SsuC {ECO:0000313|EMBL:EFE63472.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_122_031G1_scaffold_171_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31701..32846)
DNA (1146bp) protein (382aa)
Alkanesulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380}; EC=1.14.14.5 {ECO:0000256|HAMAP-Rule:MF_01229, ECO:0000256|SAAS:SAAS00023380};; FMNH2-dependent aliphatic sulfonate monooxygenase {ECO:0000256|HAMAP-Rule:MF_01229}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
Alkanesulfonate monooxygenase n=155 Tax=Escherichia RepID=SSUD_ECOBW
alkanesulfonate monooxygenase SsuD
L3_122_031G1_scaffold_171_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(32843..33802)
DNA (960bp) protein (320aa)
ABC transporter, periplasmic substrate-binding protein, aliphatic sulfonates family n=147 Tax=Escherichia coli RepID=A7ZYN9_ECOHS
ssuA; alkanesulfonate transporter substrate-binding subunit
ABC transporter, substrate-binding protein, aliphatic sulfonates family {ECO:0000313|EMBL:EGB88271.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L3_122_031G1_scaffold_171_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(33795..34370)
DNA (576bp) protein (192aa)
FMN reductase (NADPH) n=332 Tax=Enterobacteriaceae RepID=SSUE_ECOLI
FMN reductase
FMN reductase {ECO:0000313|EMBL:ADX51486.1}; Flags: Precursor;; TaxID=595495 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 55124 / KO11).;"
L3_122_031G1_scaffold_171_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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34727..35266
DNA (540bp) protein (180aa)
Fimbrial subunit ElfA n=101 Tax=Escherichia RepID=ELFA_ECOLI
ycbQ; putative fimbrial-like adhesin protein
Type 1 fimbriae major subunit FimA {ECO:0000313|EMBL:CDK80548.1}; TaxID=1432548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS25.;"
L3_122_031G1_scaffold_171_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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35349..36050
DNA (702bp) protein (234aa)
Probable fimbrial chaperone protein ElfD n=95 Tax=Escherichia RepID=ELFD_ECOLI
Pili assembly chaperone, N-terminal
Gram-negative pili assembly chaperone domain protein {ECO:0000313|EMBL:EFK92982.1}; TaxID=749540 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 146-1.;"
L3_122_031G1_scaffold_171_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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36075..38675
DNA (2601bp) protein (867aa)
Outer membrane usher protein n=2 Tax=Escherichia coli RepID=U0BFA9_ECOLX
ycbS; predicted outer membrane usher protein
Putative outer membrane fimbrial subunit export usher protein {ECO:0000313|EMBL:AKF54840.1}; Putative outer membrane usher protein {ECO:0000313|EMBL:KGM78318.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying items 1-30 of 112 in total

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