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L3_122_031G1_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_178_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86..1135)
DNA (1050bp) protein (350aa)
Transposase n=10 Tax=Bifidobacterium longum RepID=E8MG71_BIFL2
transposase
Transposase {ECO:0000313|EMBL:ACD98777.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_178_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1470..2996
DNA (1527bp) protein (509aa)
Sucrose phosphorylase {ECO:0000313|EMBL:KFI66274.1}; EC=2.4.1.7 {ECO:0000313|EMBL:KFI66274.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Sucrose phosphorylase n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GT34_BIFLS
Sucrose phosphorylase
L3_122_031G1_scaffold_178_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3214..4851
DNA (1638bp) protein (546aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DPQ6_BIFLN
Putative transport protein {ECO:0000313|EMBL:BAJ65777.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
transport protein
L3_122_031G1_scaffold_178_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4915..5958
DNA (1044bp) protein (348aa)
LacI-type transcriptional regulator n=3 Tax=Bifidobacterium longum RepID=F8AUH5_BIFLN
scrR; LacI-type transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:AAN24360.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_031G1_scaffold_178_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6460..7827
DNA (1368bp) protein (456aa)
Transport protein n=7 Tax=Bifidobacterium RepID=F8AUH4_BIFLN
transporter
Transporter, MFS superfamily {ECO:0000313|EMBL:ESV32733.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_031G1_scaffold_178_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8024..9076
DNA (1053bp) protein (351aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Ketol-acid reductoisomerase 2 n=8 Tax=Bifidobacterium RepID=ILVC2_BIFLO
ketol-acid reductoisomerase
L3_122_031G1_scaffold_178_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9505..10557
DNA (1053bp) protein (351aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Ketol-acid reductoisomerase 1 n=17 Tax=Bifidobacterium RepID=ILVC1_BIFLO
ketol-acid reductoisomerase
L3_122_031G1_scaffold_178_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10705..12519)
DNA (1815bp) protein (605aa)
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GSM6_BIFLN
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEI81555.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
alpha-1,4-glucosidase
L3_122_031G1_scaffold_178_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12679..13713)
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=10 Tax=Bifidobacterium longum RepID=D6DAQ3_BIFLN
laci-type response repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EIJ23030.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_178_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13846..16083)
DNA (2238bp) protein (746aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBK71255.1}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBK71255.1};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=5 Tax=Bifidobacterium longum RepID=D6DAQ2_BIFLN
L3_122_031G1_scaffold_178_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16344..16625)
DNA (282bp) protein (94aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=B3DNQ6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96183.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_031G1_scaffold_178_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16670..17326
DNA (657bp) protein (219aa)
Secreted alpha-amylase n=4 Tax=Bacteria RepID=S3DPR7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82774.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_122_031G1_scaffold_178_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17338..18348)
DNA (1011bp) protein (337aa)
LacI-type response repressor n=16 Tax=Bifidobacterium RepID=B3DNQ4_BIFLD
transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEI81560.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_031G1_scaffold_178_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18618..19334
DNA (717bp) protein (239aa)
MalG-type ABC sugar transport system permease component n=15 Tax=Bifidobacterium RepID=B3DNQ3_BIFLD
ABC transporter permease
ABC transporter, permease domain protein {ECO:0000313|EMBL:EIJ23059.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_178_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19446..21983
DNA (2538bp) protein (846aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium longum RepID=E4R0W0_BIFLM
Alpha-glucosidase {ECO:0000313|EMBL:KHD94682.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
alpha-glucosidase
L3_122_031G1_scaffold_178_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22136..22249
DNA (114bp) protein (38aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DNQ1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ23044.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_178_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22966..24846
DNA (1881bp) protein (627aa)
Chaperone protein DnaK n=20 Tax=Bifidobacterium RepID=DNAK_BIFLD
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
chaperone DnaK
L3_122_031G1_scaffold_178_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24846..25502
DNA (657bp) protein (219aa)
Protein GrpE n=14 Tax=Bifidobacterium RepID=GRPE_BIFLO
Molecular chaperone GrpE (heat shock protein)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_122_031G1_scaffold_178_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25734..26753
DNA (1020bp) protein (340aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=13 Tax=Bifidobacterium RepID=D6DAP4_BIFLN
chaperone
Chaperone protein similar to DnaJ {ECO:0000313|EMBL:AAN24346.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_031G1_scaffold_178_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26768..27355
DNA (588bp) protein (196aa)
GlnR n=12 Tax=Bifidobacterium RepID=E4R0V5_BIFLM
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EIJ23036.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_178_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27628..28980
DNA (1353bp) protein (451aa)
Xanthine/uracil transport protein n=8 Tax=Bifidobacterium RepID=E8MG92_BIFL2
xanthine/uracil transport protein
Putative permease {ECO:0000313|EMBL:EEI81569.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_031G1_scaffold_178_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29017..30138
DNA (1122bp) protein (374aa)
Coenzyme F390 synthetase n=14 Tax=Bifidobacterium RepID=B3DNP4_BIFLD
acyl protein synthase/acyl-CoA reductase
Acyl-protein synthetase LuxE {ECO:0000313|EMBL:EIJ30882.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_031G1_scaffold_178_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30146..31624
DNA (1479bp) protein (493aa)
Acyl-CoA reductase {ECO:0000256|PIRNR:PIRNR009414}; EC=1.2.1.50 {ECO:0000256|PIRNR:PIRNR009414};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Acyl-CoA reductase n=2 Tax=Bifidobacterium longum RepID=E8MG94_BIFL2
acyl-CoA reductase
L3_122_031G1_scaffold_178_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31711..32481
DNA (771bp) protein (257aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GSP3_BIFLN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEI81572.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
3-oxoacyl-ACP reductase
L3_122_031G1_scaffold_178_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32594..33265
DNA (672bp) protein (224aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=14 Tax=Bifidobacterium RepID=D6DAN9_BIFLN
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KEY23932.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_178_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33532..34536
DNA (1005bp) protein (335aa)
ABC-type sugar transport systems, permease component n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZXH5_BIFLJ
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AEI98340.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_031G1_scaffold_178_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34552..35352
DNA (801bp) protein (267aa)
ABC-type sugar transport system, permease component n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZXH6_BIFLJ
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AEI98339.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_031G1_scaffold_178_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35364..37505
DNA (2142bp) protein (714aa)
Predicted beta-xylosidase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU71_BIFLN
Predicted beta-xylosidase {ECO:0000313|EMBL:AEI98338.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Predicted beta-xylosidase
L3_122_031G1_scaffold_178_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37617..38942
DNA (1326bp) protein (442aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXH8_BIFLJ
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:KFI66293.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
family 1 extracellular solute-binding protein
L3_122_031G1_scaffold_178_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

39307..40335
DNA (1029bp) protein (343aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXH9_BIFLJ
periplasmic-binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADG99625.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Displaying items 1-30 of 58 in total

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