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L3_122_031G1_scaffold_255

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_255_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(163..579)
DNA (417bp) protein (139aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYC1_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT15293.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_255_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1087..1908)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLN6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT27760.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
hypothetical protein
L3_122_031G1_scaffold_255_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1927..3183)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15298.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_031G1_scaffold_255_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3299..4747)
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Sensor histidine kinase n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK6_CLOPF
virJ; two-component sensor histidine kinase
L3_122_031G1_scaffold_255_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4737..5552)
DNA (816bp) protein (272aa)
DNA-binding response regulator n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSK7_CLOPF
DNA-binding response regulator {ECO:0000313|EMBL:EDT15287.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
virI; DNA-binding response regulator
L3_122_031G1_scaffold_255_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5636..6031)
DNA (396bp) protein (132aa)
Uncharacterized protein n=7 Tax=Clostridium perfringens RepID=B1BIB5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27712.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_122_031G1_scaffold_255_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6164..6454)
DNA (291bp) protein (97aa)
Uncharacterized protein n=9 Tax=Clostridium perfringens RepID=H7CYC7_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT27814.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
L3_122_031G1_scaffold_255_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6466..8223)
DNA (1758bp) protein (586aa)
Helicase domain-containing protein n=6 Tax=Clostridium perfringens RepID=H7CYC8_CLOPF
helicase
Helicase domain protein {ECO:0000313|EMBL:EDT25247.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_122_031G1_scaffold_255_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8486..9346
DNA (861bp) protein (287aa)
prmA; ribosomal protein L11 methyltransferase (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase n=5 Tax=Clostridium perfringens RepID=B1RLP3_CLOPF
Putative ribosomal protein L11 methyltransferase {ECO:0000313|EMBL:EDT25176.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_122_031G1_scaffold_255_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9550..10065)
DNA (516bp) protein (172aa)
Uncharacterized protein n=6 Tax=Clostridium perfringens RepID=Q8XIL5_CLOPE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EDT25370.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_122_031G1_scaffold_255_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10083..10457)
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=B1BSL3_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT73274.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
L3_122_031G1_scaffold_255_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10458..11489)
DNA (1032bp) protein (344aa)
Putative thiamin biosynthesis lipoprotein ApbE n=2 Tax=Clostridium perfringens RepID=B1R3I9_CLOPF
Putative thiamin biosynthesis lipoprotein ApbE {ECO:0000313|EMBL:EDT25336.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
thiamin biosynthesis lipoprotein ApbE
L3_122_031G1_scaffold_255_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11661..14903)
DNA (3243bp) protein (1081aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL5_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15249.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_031G1_scaffold_255_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14916..15962)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL6_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT15320.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_122_031G1_scaffold_255_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16162..16611)
DNA (450bp) protein (150aa)
Uncharacterized protein n=3 Tax=Clostridium perfringens RepID=H7CYD5_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIA16313.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_122_031G1_scaffold_255_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16899..18320
DNA (1422bp) protein (474aa)
Major facilitator family transporter n=6 Tax=Clostridium perfringens RepID=Q0TNK0_CLOP1
major facilitator family transporter
Major facilitator family transporter {ECO:0000313|EMBL:EDT15326.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_122_031G1_scaffold_255_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18444..20198)
DNA (1755bp) protein (585aa)
Subtilase family protein {ECO:0000313|EMBL:EDT15265.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT15265.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Subtilase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSL9_CLOPF
subtilase
L3_122_031G1_scaffold_255_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20200..21798)
DNA (1599bp) protein (533aa)
Subtilase family protein {ECO:0000313|EMBL:EDT15264.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDT15264.1};; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Subtilase family protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BSM0_CLOPF
hypothetical protein
L3_122_031G1_scaffold_255_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22269..23624)
DNA (1356bp) protein (452aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA-methyltransferase RumA {ECO:0000313|EMBL:EDT25184.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDT25184.1};; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
23S rRNA (Uracil-5-)-methyltransferase RumA n=4 Tax=Clostridium perfringens RepID=Q0TNJ7_CLOP1
L3_122_031G1_scaffold_255_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23652..24101)
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=H7CYE0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA16318.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_122_031G1_scaffold_255_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24288..26195)
DNA (1908bp) protein (636aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BLV7_CLOPF
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EDS79175.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
selB; selenocysteine-specific translation elongation factor
L3_122_031G1_scaffold_255_22
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26196..27584)
DNA (1389bp) protein (463aa)
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
selA; selenocysteine synthase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase n=1 Tax=Clostridium perfringens F262 RepID=H7CYE2_CLOPF
L3_122_031G1_scaffold_255_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27601..28632)
DNA (1032bp) protein (344aa)
selD; selenide, water dikinase (EC:2.7.9.3)
Selenide, water dikinase {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883}; EC=2.7.9.3 {ECO:0000256|HAMAP-Rule:MF_00625, ECO:0000256|SAAS:SAAS00014883};; Selenium donor protein {ECO:0000256|HAMAP-Rule:MF_00625}; Selenophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00625}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain SM101 / Type A).;"
Selenide, water dikinase n=2 Tax=Clostridium perfringens RepID=Q0TNJ3_CLOP1
L3_122_031G1_scaffold_255_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28677..29441)
DNA (765bp) protein (255aa)
ComEA protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CTA1_CLOPF
Putative comE operon protein 1 {ECO:0000313|EMBL:EDT27711.1}; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
comEA; competence protein ComE
L3_122_031G1_scaffold_255_25
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29637..30971
DNA (1335bp) protein (445aa)
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:EDT73308.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EDT73308.1};; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens D str. JGS1721.;"
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Clostridium perfringens NCTC 8239 RepID=B1RLQ8_CLOPF
dacF; D-alanyl-D-alanine carboxypeptidase
L3_122_031G1_scaffold_255_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31004..31900)
DNA (897bp) protein (299aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=451756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens CPE str. F4969.;"
Pseudouridine synthase, RluA family n=2 Tax=Clostridium perfringens RepID=B1RE18_CLOPF
hypothetical protein
L3_122_031G1_scaffold_255_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31888..33210)
DNA (1323bp) protein (441aa)
Cell envelope-related transcriptional attenuator domain protein n=2 Tax=Clostridium perfringens RepID=B1BSM8_CLOPF
membrane-bound protein
Probable membrane-bound protein {ECO:0000313|EMBL:BAB81829.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain 13 / Type A).;"
L3_122_031G1_scaffold_255_28
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33233..33802)
DNA (570bp) protein (190aa)
HD domain-containing protein n=2 Tax=Clostridium perfringens RepID=H7CYE8_CLOPF
HD domain-containing protein {ECO:0000313|EMBL:EIA16326.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
HD domain-containing protein
L3_122_031G1_scaffold_255_29
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33805..34413)
DNA (609bp) protein (203aa)
nadD; nicotinic acid mononucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Probable nicotinate-nucleotide adenylyltransferase n=8 Tax=Clostridium perfringens RepID=NADD_CLOP1
L3_122_031G1_scaffold_255_30
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34415..34717)
DNA (303bp) protein (101aa)
Uncharacterized protein n=11 Tax=Clostridium perfringens RepID=Q8XIJ3_CLOPE
putative RNA-binding protein
Putative RNA-binding protein {ECO:0000313|EMBL:EDT15284.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
Displaying items 1-30 of 92 in total

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