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L3_122_031G1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_300_1
unknown

Not on your lists

3..410
DNA (408bp) protein (136aa)

This feature has no annotations

L3_122_031G1_scaffold_300_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

410..634
DNA (225bp) protein (75aa)
NADPH-quinone reductase n=14 Tax=Bifidobacterium longum RepID=B3DQ45_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEQ56237.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_122_031G1_scaffold_300_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

693..947
DNA (255bp) protein (85aa)
NIL domain protein n=2 Tax=Bifidobacterium RepID=C5EDZ4_BIFLI
NIL domain protein {ECO:0000313|EMBL:EEQ56238.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
abcC1; abcc1
L3_122_031G1_scaffold_300_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1113..1382
DNA (270bp) protein (90aa)
MetC2 n=9 Tax=Bifidobacterium RepID=E4R1G5_BIFLM
metC2; metc2
Cys/Met metabolism PLP-dependent enzyme domain protein {ECO:0000313|EMBL:EIJ26349.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_300_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1542..2441
DNA (900bp) protein (300aa)
Membrane protease-like protein n=15 Tax=Bifidobacterium RepID=B3DQ49_BIFLD
hypothetical protein
Membrane protease-like protein {ECO:0000313|EMBL:ACD97548.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_300_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2508..3353)
DNA (846bp) protein (282aa)
Phospholipase n=4 Tax=Bifidobacterium RepID=V6XZH0_BIFLN
esterase-like protein
Phospholipase {ECO:0000313|EMBL:ESV33911.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_031G1_scaffold_300_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3482..4276)
DNA (795bp) protein (265aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Glutamate racemase n=15 Tax=Bifidobacterium RepID=MURI_BIFLD
murI; glutamate racemase
L3_122_031G1_scaffold_300_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4384..5277
DNA (894bp) protein (298aa)
Diaminopimelate epimerase {ECO:0000256|SAAS:SAAS00028055}; EC=5.1.1.7 {ECO:0000256|SAAS:SAAS00028063};; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
Diaminopimelate epimerase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AWI0_BIFLN
diaminopimelate epimerase
L3_122_031G1_scaffold_300_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5283..5900)
DNA (618bp) protein (206aa)
Vitamin K epoxide reductase family protein n=1 Tax=Bifidobacterium longum subsp. longum 44B RepID=I3BEL7_BIFLN
membrane protein
Membrane protein {ECO:0000313|EMBL:AIW44018.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_300_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5902..6150
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:BAP83936.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_122_031G1_scaffold_300_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6158..7051
DNA (894bp) protein (298aa)
PHP domain protein {ECO:0000313|EMBL:EEI80667.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEI80667.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=Q8G7Z5_BIFLO
metal-dependent phosphoesterse
L3_122_031G1_scaffold_300_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7112..7336)
DNA (225bp) protein (75aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DQ55_BIFLD
Protein of unknown function (DUF3107).
Putative ATP-binding protein {ECO:0000313|EMBL:CCK35314.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_122_031G1_scaffold_300_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7485..9140)
DNA (1656bp) protein (552aa)
Putative aminoglycoside phosphotransferase n=2 Tax=Bifidobacterium longum RepID=B3DQ56_BIFLD
aminoglycoside phosphotransferase
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACD97555.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_300_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9286..10860
DNA (1575bp) protein (525aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
DNA-helicase-II-like protein n=6 Tax=Bifidobacterium RepID=V6Y203_BIFLN
DNA helicase
L3_122_031G1_scaffold_300_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10929..12674)
DNA (1746bp) protein (582aa)
Hydrolase domain protein n=7 Tax=Bifidobacterium RepID=I3AWI6_BIFLN
Hydrolase domain protein {ECO:0000313|EMBL:EIJ26357.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_122_031G1_scaffold_300_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12895..13776
DNA (882bp) protein (294aa)
Peptidase S16, lon domain protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GPZ9_BIFLS
hypothetical protein
Peptidase S16, lon domain protein {ECO:0000313|EMBL:ACJ51879.1}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_122_031G1_scaffold_300_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13892..14308
DNA (417bp) protein (139aa)
Uncharacterized protein n=14 Tax=Bifidobacterium RepID=Q8G7Y9_BIFLO
hypothetical protein
PF11253 family protein {ECO:0000313|EMBL:EIJ26324.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_300_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14777..16480
DNA (1704bp) protein (568aa)
Uncharacterized protein n=4 Tax=Bacteria RepID=B3DQ61_BIFLD
hypothetical protein
DivIVA domain repeat protein {ECO:0000313|EMBL:CBK69765.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_300_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16477..17667
DNA (1191bp) protein (397aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MZM5_9BIFI
dxr; dxr
L3_122_031G1_scaffold_300_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17664..18887
DNA (1224bp) protein (408aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=12 Tax=Bifidobacterium RepID=D6DB93_BIFLN
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
L3_122_031G1_scaffold_300_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19008..20720
DNA (1713bp) protein (571aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GW73_BIFLN
Esterase {ECO:0000313|EMBL:AIW44008.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
esterase
L3_122_031G1_scaffold_300_22
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20770..21489
DNA (720bp) protein (240aa)
DNA repair protein RecO n=5 Tax=Bifidobacterium RepID=E8ME86_BIFL2
DNA repair protein RecO
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_031G1_scaffold_300_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21486..22280
DNA (795bp) protein (265aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Isoprenyl transferase n=16 Tax=Bacteria RepID=ISPT_BIFLO
uppS; undecaprenyl pyrophosphate synthase
L3_122_031G1_scaffold_300_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22399..23646)
DNA (1248bp) protein (416aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8AUE2_BIFLN
inosine-uridine preferring nucleoside hydrolase
Inosine-uridine preferring nucleoside hydrolase {ECO:0000313|EMBL:AEI97153.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_031G1_scaffold_300_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23770..24840)
DNA (1071bp) protein (357aa)
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQ68_BIFLD
tauA; nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic component {ECO:0000313|EMBL:ACD97567.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_300_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25101..25883)
DNA (783bp) protein (261aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=6 Tax=Bifidobacterium RepID=B3DQ69_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY21763.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_300_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26079..27635)
DNA (1557bp) protein (519aa)
Beta-fructofuranosidase (Sucrase/invertase) possible inulinase n=2 Tax=Bifidobacterium RepID=Q8CY57_BIFLO
Glycoside hydrolase family 32 beta-fructofuranosidase {ECO:0000313|EMBL:BAP83919.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
cscA; beta-fructofuranosidase
L3_122_031G1_scaffold_300_28
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27646..28983)
DNA (1338bp) protein (446aa)
Galactoside transport protein n=4 Tax=Bifidobacterium RepID=E8MUT0_BIFL1
galactoside transport protein
H+ symporter {ECO:0000313|EMBL:EFV38345.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_031G1_scaffold_300_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29197..30237)
DNA (1041bp) protein (347aa)
Sugar-binding domain protein n=3 Tax=Bifidobacterium longum RepID=C5EE19_BIFLI
Sugar-binding domain protein {ECO:0000313|EMBL:EEI80687.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
LacI-type transcriptional regulator
L3_122_031G1_scaffold_300_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30281..31678)
DNA (1398bp) protein (466aa)
Putative serine protease inhibitor n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MUS8_BIFL1
serine protease inhibitor
Putative serine protease inhibitor {ECO:0000313|EMBL:BAJ71522.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Displaying items 1-30 of 50 in total

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