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L3_122_031G1_scaffold_303

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Displaying items 1-30 of 87 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_303_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1297
DNA (1296bp) protein (432aa)
S-methylmethionine transporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DI66_CITFR
Amino acid transporter {ECO:0000313|EMBL:KJC04645.2}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mmuP; MmuP protein
L3_122_031G1_scaffold_303_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1284..2216
DNA (933bp) protein (311aa)
CP4-6 prophage n=3 Tax=Citrobacter RepID=J0M1C2_9ENTR
Homocysteine methyltransferase {ECO:0000313|EMBL:KJC04646.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
mmuM; homocysteine methyltransferase
L3_122_031G1_scaffold_303_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2325..3371)
DNA (1047bp) protein (349aa)
Fe(3+) ions import ATP-binding protein FbpC {ECO:0000256|HAMAP-Rule:MF_01706}; EC=3.6.3.30 {ECO:0000256|HAMAP-Rule:MF_01706};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Ferric transporter ATP-binding subunit n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1U3_CITFR
afuC; Fe(3+) ions import ATP-binding protein fbpC
L3_122_031G1_scaffold_303_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3383..5461)
DNA (2079bp) protein (693aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QPV6_CITFR
Iron(III) transport system permease {ECO:0000313|EMBL:ETX72438.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
iron ABC transporter permease
L3_122_031G1_scaffold_303_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5531..6562)
DNA (1032bp) protein (344aa)
Periplasmic ferric iron-binding protein n=6 Tax=Citrobacter RepID=J0VU27_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13102.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_303_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6559..7863)
DNA (1305bp) protein (435aa)
Regulatory protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QY16_CITFR
MFS transporter {ECO:0000313|EMBL:KJC04650.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
MFS transporter
L3_122_031G1_scaffold_303_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7949..9490)
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CU59_CITFR
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein {ECO:0000313|EMBL:KEL80537.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
histidine kinase
L3_122_031G1_scaffold_303_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9490..10182)
DNA (693bp) protein (231aa)
Transcriptional regulatory protein UhpA n=6 Tax=Citrobacter RepID=J1G564_9ENTR
LuxR family two-component system transcriptional regulator {ECO:0000313|EMBL:ETX72442.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L3_122_031G1_scaffold_303_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10418..11380
DNA (963bp) protein (321aa)
Substrate-binding protein n=4 Tax=Citrobacter RepID=J0M807_9ENTR
Taurine-binding periplasmic protein TauA {ECO:0000313|EMBL:CDL42085.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
tauA; taurine ABC transporter substrate-binding protein
L3_122_031G1_scaffold_303_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11395..11700
DNA (306bp) protein (102aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tauB; taurine transporter ATP-binding subunit (EC:3.6.3.36)
Taurine transporter subunit n=3 Tax=Citrobacter RepID=J0VU23_9ENTR
L3_122_031G1_scaffold_303_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11672..12163
DNA (492bp) protein (164aa)
Taurine import ATP-binding protein TauB {ECO:0000256|HAMAP-Rule:MF_01714}; EC=3.6.3.36 {ECO:0000256|HAMAP-Rule:MF_01714};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
tauB; taurine transporter ATP-binding subunit (EC:3.6.3.36)
Taurine ABC transporter ATP-binding protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DH92_CITFR
L3_122_031G1_scaffold_303_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12160..12990
DNA (831bp) protein (277aa)
Taurine transporter subunit n=4 Tax=Citrobacter RepID=J1G5H4_9ENTR
Taurine transport system permease tauC {ECO:0000313|EMBL:ETX72445.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
taurine transporter subunit
L3_122_031G1_scaffold_303_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12987..13835
DNA (849bp) protein (283aa)
Alpha-ketoglutarate-dependent taurine dioxygenase {ECO:0000313|EMBL:KEL80532.1}; EC=1.14.11.17 {ECO:0000313|EMBL:KEL80532.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
tauD; taurine dioxygenase (EC:1.14.11.17)
Alpha-ketoglutarate-dependent taurine dioxygenase n=6 Tax=Citrobacter RepID=J0M1B6_9ENTR
L3_122_031G1_scaffold_303_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13895..14869)
DNA (975bp) protein (325aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Delta-aminolevulinic acid dehydratase n=5 Tax=Citrobacter RepID=J1G559_9ENTR
delta-aminolevulinic acid dehydratase
L3_122_031G1_scaffold_303_15
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15378..15485
DNA (108bp) protein (36aa)
Outer membrane autotransporter barrel domain protein n=3 Tax=Citrobacter RepID=J0M802_9ENTR
Putative flagellin structural protein {ECO:0000313|EMBL:CEJ66280.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
hypothetical protein
L3_122_031G1_scaffold_303_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15454..18246
DNA (2793bp) protein (931aa)
Structural protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UXY7_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC04657.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
autotransporter/virulence factor
L3_122_031G1_scaffold_303_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18336..18959
DNA (624bp) protein (208aa)
DNA-binding transcriptional regulator n=2 Tax=Citrobacter RepID=M3DH87_CITFR
Transcriptional regulator {ECO:0000313|EMBL:ETX72449.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L3_122_031G1_scaffold_303_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18961..20118)
DNA (1158bp) protein (386aa)
Penicillin-binding protein AmpH n=6 Tax=Citrobacter RepID=J1G5H0_9ENTR
Penicillin-binding protein AmpH {ECO:0000313|EMBL:ETX72450.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
beta-lactam-binding protein
L3_122_031G1_scaffold_303_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20504..21724
DNA (1221bp) protein (407aa)
Microcin B17 transporter n=2 Tax=Citrobacter freundii RepID=K8QY97_CITFR
Protein sbmA {ECO:0000313|EMBL:KEL80526.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
microcin B17 transporter
L3_122_031G1_scaffold_303_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21740..22843
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=M3BBB0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80525.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_122_031G1_scaffold_303_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22828..23151)
DNA (324bp) protein (108aa)
Inner membrane protein yaiY n=4 Tax=Citrobacter RepID=J0M7Z6_9ENTR
Inner membrane protein yaiY {ECO:0000313|EMBL:ETX72453.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_122_031G1_scaffold_303_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23415..23633
DNA (219bp) protein (73aa)
Inner membrane protein n=6 Tax=Citrobacter RepID=J0VU12_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX72454.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_122_031G1_scaffold_303_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23657..24769)
DNA (1113bp) protein (371aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
D-alanine--D-alanine ligase n=2 Tax=Citrobacter RepID=R8UZ15_9ENTR
D-alanine--D-alanine ligase
L3_122_031G1_scaffold_303_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25053..26249
DNA (1197bp) protein (399aa)
Multidrug resistance protein n=6 Tax=Citrobacter RepID=J0M1A6_9ENTR
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KEL80521.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
multidrug transporter
L3_122_031G1_scaffold_303_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26498..26740
DNA (243bp) protein (81aa)
Protein IraP n=6 Tax=Citrobacter RepID=J1G551_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72457.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
anti-RssB factor
L3_122_031G1_scaffold_303_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26845..28260
DNA (1416bp) protein (472aa)
Alkaline phosphatase n=5 Tax=Citrobacter RepID=J0M7Z2_9ENTR
Alkaline phosphatase {ECO:0000313|EMBL:KJC13119.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
alkaline phosphatase
L3_122_031G1_scaffold_303_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28358..28678
DNA (321bp) protein (107aa)
Phosphate starvation-inducible protein psiF n=6 Tax=Citrobacter RepID=J0VU07_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13120.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_303_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28983..29885
DNA (903bp) protein (301aa)
Diguanylate cyclase AdrA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DI40_CITFR
Diguanylate cyclase {ECO:0000313|EMBL:KJC13121.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
adrA; diguanylate cyclase
L3_122_031G1_scaffold_303_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29903..30712)
DNA (810bp) protein (270aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=5 Tax=Citrobacter RepID=J0M1A3_9ENTR
L3_122_031G1_scaffold_303_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30845..31357
DNA (513bp) protein (171aa)
UPF0178 protein WYG_1097 n=6 Tax=Citrobacter RepID=J1G548_9ENTR
UPF0178 protein YaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
Displaying items 1-30 of 87 in total

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