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L3_122_031G1_scaffold_306

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_306_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(80..778)
DNA (699bp) protein (233aa)
Phage integrase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSX2_BIFL1
phage integrase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EIJ31541.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_031G1_scaffold_306_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(985..2157)
DNA (1173bp) protein (391aa)
Ribosome-binding ATPase YchF n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GST5_BIFLS
GTP-dependent nucleic acid-binding protein EngD
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
L3_122_031G1_scaffold_306_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2213..3034)
DNA (822bp) protein (274aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Pyrroline-5-carboxylate reductase n=3 Tax=Bifidobacterium longum RepID=E8MSX0_BIFL1
pyrroline-5-carboxylate reductase
L3_122_031G1_scaffold_306_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3096..4574)
DNA (1479bp) protein (493aa)
Proline iminopeptidase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MSW9_BIFL1
proline iminopeptidase
Proline iminopeptidase {ECO:0000313|EMBL:BAJ70863.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_122_031G1_scaffold_306_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4651..7107
DNA (2457bp) protein (819aa)
Two-component sensor kinase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AQZ4_BIFLN
Signal transduction histidine kinase {ECO:0000313|EMBL:CBK70665.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
two-component sensor kinase
L3_122_031G1_scaffold_306_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7129..8019
DNA (891bp) protein (297aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6D913_BIFLN
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CBK70666.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_306_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8052..10907)
DNA (2856bp) protein (952aa)
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6D914_BIFLN
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:CBK70667.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_306_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10936..11850)
DNA (915bp) protein (305aa)
ABC-type antimicrobial peptide transport system, ATPase component n=4 Tax=Bifidobacterium longum subsp. longum RepID=D6D915_BIFLN
ABC-type antimicrobial peptide transport system, ATPase component
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EIJ24999.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_306_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12199..13515)
DNA (1317bp) protein (439aa)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:AIW43638.1}; EC=2.5.1.49 {ECO:0000313|EMBL:AIW43638.1};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
O-acetylhomoserine sulfhydrolase n=7 Tax=Bifidobacterium longum RepID=D6D916_BIFLN
O-acetylhomoserine (thiol)-lyase
L3_122_031G1_scaffold_306_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13989..14861
DNA (873bp) protein (291aa)
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Pyridoxal/pyridoxine/pyridoxamine kinase n=11 Tax=Bifidobacterium RepID=D6D917_BIFLN
L3_122_031G1_scaffold_306_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15098..15601
DNA (504bp) protein (168aa)
UPF0102 protein BLJ_0797 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZTQ7_BIFLJ
endonuclease
UPF0102 protein BL171B_02045 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_306_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15660..17195
DNA (1536bp) protein (512aa)
Mg chelatase-related protein n=15 Tax=Bifidobacterium RepID=D6D919_BIFLN
Uncharacterized protein {ECO:0000313|EMBL:AEI97745.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
hypothetical protein
L3_122_031G1_scaffold_306_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17192..18892
DNA (1701bp) protein (567aa)
Rossmann fold nucleotide-binding protein Smf possibly involved in DNA uptake n=4 Tax=Bifidobacterium longum RepID=S3DQ15_BIFLN
Putative uncharacterized protein {ECO:0000313|EMBL:BAJ66351.1}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
hypothetical protein
L3_122_031G1_scaffold_306_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18973..20814
DNA (1842bp) protein (614aa)
SdhA n=16 Tax=Bifidobacterium RepID=E4QZ84_BIFLM
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EIJ25860.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
succinate dehydrogenase flavoprotein subunit
L3_122_031G1_scaffold_306_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20910..21875
DNA (966bp) protein (322aa)
Succinate dehydrogenase/fumarate reductase Fe-S protein subunit n=13 Tax=Bifidobacterium RepID=B3DSK7_BIFLD
succinate dehydrogenase iron-sulfur subunit
(2Fe-2S)-binding protein {ECO:0000313|EMBL:AIW43632.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_306_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21969..22634
DNA (666bp) protein (222aa)
Methyltransferase n=16 Tax=Bifidobacterium RepID=F8AR05_BIFLN
methyltransferase
Predicted O-methyltransferase {ECO:0000313|EMBL:CBK70676.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_306_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22680..23621)
DNA (942bp) protein (314aa)
TIGR00730 family protein n=9 Tax=Bifidobacterium RepID=C5EAF9_BIFLI
hypothetical protein
DNA-binding protein {ECO:0000313|EMBL:AIW43630.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_306_18
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23854..25272)
DNA (1419bp) protein (473aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MWN7_9BIFI
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
sodium/proton antiporter, NhaA family (TC 2.A.33.1.1)
L3_122_031G1_scaffold_306_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25753..27171)
DNA (1419bp) protein (473aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=13 Tax=Bifidobacterium RepID=D6D926_BIFLN
ATP-dependent Clp protease ATP-binding subunit
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_031G1_scaffold_306_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27293..27994)
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
ATP-dependent Clp protease proteolytic subunit 1 n=15 Tax=Bifidobacterium RepID=CLPP1_BIFLO
L3_122_031G1_scaffold_306_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28000..28623)
DNA (624bp) protein (208aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
ATP-dependent Clp protease proteolytic subunit 2 n=21 Tax=Bifidobacterium RepID=CLPP2_BIFLO
clpP2; clpp2
L3_122_031G1_scaffold_306_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28729..29109)
DNA (381bp) protein (127aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=B3DSL4_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK70682.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_306_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29221..30687)
DNA (1467bp) protein (489aa)
Chloride transporter, ClC family n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3B6M0_BIFLN
chloride channel protein
Chloride channel protein {ECO:0000313|EMBL:KHD94362.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_122_031G1_scaffold_306_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30872..32251)
DNA (1380bp) protein (460aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Trigger factor n=12 Tax=Bifidobacterium RepID=TIG_BIFLD
trigger factor
L3_122_031G1_scaffold_306_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32306..33607)
DNA (1302bp) protein (434aa)
Exonuclease n=8 Tax=Bifidobacterium longum RepID=F8AR14_BIFLN
exonuclease
Ribonuclease D {ECO:0000313|EMBL:KEY22043.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_306_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33604..34242)
DNA (639bp) protein (213aa)
Uncharacterized protein n=5 Tax=Bifidobacterium longum RepID=B3DSL8_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98137.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_306_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34305..35186)
DNA (882bp) protein (294aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
Pyruvate-formate lyase-activating enzyme n=12 Tax=Bifidobacterium RepID=B3DSL9_BIFLD
pyruvate formate-lyase activating enzyme
L3_122_031G1_scaffold_306_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35296..37671)
DNA (2376bp) protein (792aa)
Formate acetyltransferase 1 {ECO:0000313|EMBL:CBK70687.1}; EC=2.3.1.54 {ECO:0000313|EMBL:CBK70687.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Formate acetyltransferase n=15 Tax=Bifidobacterium RepID=Q8G5Q3_BIFLO
formate acetyltransferase
L3_122_031G1_scaffold_306_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37937..38161)
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=Q8G5Q2_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY22039.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_306_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38214..39911)
DNA (1698bp) protein (566aa)
NAD+ synthase n=10 Tax=Bacteria RepID=E8MSU3_BIFL1
Glutamine-dependent NAD(+) synthetase {ECO:0000313|EMBL:AAN24765.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
amidohydrolase
Displaying items 1-30 of 40 in total

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