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L3_122_031G1_scaffold_342

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_342_1
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(166..1389)
DNA (1224bp) protein (408aa)
processing peptidase (EC:3.4.24.64)
Peptidase M16 inactive domain protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CHF3_9BACE
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDA70961.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_031G1_scaffold_342_2
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1548..2084
DNA (537bp) protein (179aa)
TIGR00730 family protein n=2 Tax=Bacteroides RepID=B3JHA6_9BACE
TIGR00730 family protein {ECO:0000313|EMBL:CDA70960.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_3
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2105..2707
DNA (603bp) protein (201aa)
Sugar isomerase KpsF/GutQ family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CDF5_9BACE
Sugar isomerase KpsF/GutQ family {ECO:0000313|EMBL:CDA70959.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
sugar isomerase
L3_122_031G1_scaffold_342_4
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2722..3642
DNA (921bp) protein (307aa)
Kinase, PfkB family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHA8_9BACE
Kinase, PfkB family {ECO:0000313|EMBL:EDV01567.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
fructokinase
L3_122_031G1_scaffold_342_5
unknown

Not on your lists

comp(3575..3802)
DNA (228bp) protein (76aa)

This feature has no annotations

L3_122_031G1_scaffold_342_6
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3816..4940)
DNA (1125bp) protein (375aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
tRNA-specific 2-thiouridylase MnmA n=2 Tax=Bacteroides RepID=B3JHA9_9BACE
tRNA-specific 2-thiouridylase mnmA
L3_122_031G1_scaffold_342_7
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4987..5853)
DNA (867bp) protein (289aa)
4Fe-4S binding domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHB0_9BACE
4Fe-4S binding domain protein {ECO:0000313|EMBL:EDV01570.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
ferredoxin
L3_122_031G1_scaffold_342_8
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5947..6975
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=Bacteroides RepID=B3JHB1_9BACE
Holliday junction ATP-dependent DNA helicase ruvB
L3_122_031G1_scaffold_342_9
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7025..8515
DNA (1491bp) protein (497aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHB2_9BACE
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDV01571.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
polysaccharide biosynthesis protein
L3_122_031G1_scaffold_342_10
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8532..9884
DNA (1353bp) protein (451aa)
Hydrophobic domain protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHB3_9BACE
Hydrophobic domain protein {ECO:0000313|EMBL:EDV01572.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
membrane protein
L3_122_031G1_scaffold_342_11
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9966..11879)
DNA (1914bp) protein (638aa)
DEAD/DEAH box helicase n=2 Tax=Bacteroides RepID=B3JHB4_9BACE
DEAD/DEAH box helicase {ECO:0000313|EMBL:EDV01573.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
DEAD/DEAH box helicase
L3_122_031G1_scaffold_342_12
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11987..12196)
DNA (210bp) protein (70aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01574.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
transcriptional regulator, XRE family
L3_122_031G1_scaffold_342_13
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12202..12435)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C5Y8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70910.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_14
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12449..13087)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70909.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_15
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13100..13915)
DNA (816bp) protein (272aa)
CAAX amino terminal protease family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C3C4_9BACE
CAAX amino terminal protease family protein {ECO:0000313|EMBL:CDA70908.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Abortive infection protein
L3_122_031G1_scaffold_342_16
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13932..14342)
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA70907.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_17
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14655..16763
DNA (2109bp) protein (703aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHB9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01578.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
Glycoside hydrolase 97
L3_122_031G1_scaffold_342_18
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16851..17777)
DNA (927bp) protein (309aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein RibF n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC0_9BACE
L3_122_031G1_scaffold_342_19
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17786..18400)
DNA (615bp) protein (205aa)
HAD hydrolase, family IA, variant 3 n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC1_9BACE
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EDV01580.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
haloacid dehalogenase
L3_122_031G1_scaffold_342_20
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18428..21055)
DNA (2628bp) protein (876aa)
calcium-translocating P-type ATPase (EC:3.6.3.8)
Calcium-translocating P-type ATPase PMCA-type n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CHB3_9BACE
Calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CDA72254.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_031G1_scaffold_342_21
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21332..21499
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CKC5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73289.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
L3_122_031G1_scaffold_342_22
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21527..22690)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=B3JHC4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73288.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
Domain of unknown function (DUF1735).
L3_122_031G1_scaffold_342_23
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22715..23812)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D611_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73287.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_24
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23840..25462)
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CCE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA73285.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
hypothetical protein
L3_122_031G1_scaffold_342_25
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25481..28816)
DNA (3336bp) protein (1112aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHC7_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDV01586.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
TonB-dependent receptor
L3_122_031G1_scaffold_342_26
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28983..29975)
DNA (993bp) protein (331aa)
Sigma factor regulatory protein FecR/PupR family n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6C9M2_9BACE
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDA73283.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
anti-sigma factor
L3_122_031G1_scaffold_342_27
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30058..30633)
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6D607_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDA73282.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
RNA polymerase ECF-type sigma factor
L3_122_031G1_scaffold_342_28
Bacteroides sp. CAG:1076, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30819..33539
DNA (2721bp) protein (907aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:1076 RepID=R5MQD8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCY93955.1}; TaxID=1262735 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:1076.;"
SusC/RagA family TonB-linked outer membrane protein
L3_122_031G1_scaffold_342_29
Bacteroides coprocola, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33547..34290)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Bacteroides coprocola DSM 17136 RepID=B3JHD0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDV01589.1}; TaxID=470145 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides coprocola DSM 17136.;"
arginase
L3_122_031G1_scaffold_342_30
Bacteroides coprocola CAG:162, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34376..34804)
DNA (429bp) protein (143aa)
Hsp20/alpha crystallin family protein n=1 Tax=Bacteroides coprocola CAG:162 RepID=R6CCE0_9BACE
Hsp20/alpha crystallin family protein {ECO:0000313|EMBL:CDA73280.1}; TaxID=1263040 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides coprocola CAG:162.;"
heat shock protein Hsp20
Displaying items 1-30 of 40 in total

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