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L3_122_031G1_scaffold_355

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_355_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..101)
DNA (99bp) protein (33aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQT8_CITFR
Amidohydrolase family protein {ECO:0000313|EMBL:KEL78913.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L3_122_031G1_scaffold_355_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160..804)
DNA (645bp) protein (215aa)
Uncharacterized protein n=8 Tax=Enterobacteriaceae RepID=C1MBY2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX71924.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_122_031G1_scaffold_355_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(816..1592)
DNA (777bp) protein (259aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1MBY1_9ENTR
Membrane protein {ECO:0000313|EMBL:KJC13694.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L3_122_031G1_scaffold_355_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1615..1914)
DNA (300bp) protein (100aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1MBY0_9ENTR
Cytoplasmic protein {ECO:0000313|EMBL:ETX71922.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cytoplasmic protein
L3_122_031G1_scaffold_355_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1917..2279)
DNA (363bp) protein (121aa)
EF_0830/AHA_3911 family protein n=11 Tax=Enterobacteriaceae RepID=D4BFT2_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX65487.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L3_122_031G1_scaffold_355_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2290..2598)
DNA (309bp) protein (103aa)
PRD domain-containing protein n=7 Tax=Citrobacter RepID=C1MBX8_9ENTR
PRD domain protein {ECO:0000313|EMBL:KEL78918.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
glycine dehydrogenase
L3_122_031G1_scaffold_355_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2931..3317)
DNA (387bp) protein (129aa)
Soluble cytochrome b562 n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2K5_9ENTR
Cytochrome b562 {ECO:0000313|EMBL:KJC07762.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cytochrome b562
L3_122_031G1_scaffold_355_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3364..4716)
DNA (1353bp) protein (451aa)
Protein pmbA n=6 Tax=Citrobacter RepID=G9SEY4_CITFR
Peptidase PmbA {ECO:0000313|EMBL:KJC07763.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
pmbA; peptidase PmbA
L3_122_031G1_scaffold_355_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4812..5363
DNA (552bp) protein (184aa)
UPF0307 protein WYG_2991 n=5 Tax=Citrobacter RepID=J1G042_9ENTR
UPF0307 protein P834_04947 {ECO:0000256|HAMAP-Rule:MF_00765}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_355_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5471..6850)
DNA (1380bp) protein (460aa)
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase n=2 Tax=Citrobacter RepID=K8QNM0_CITFR
L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase {ECO:0000313|EMBL:KEL78922.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
L3_122_031G1_scaffold_355_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7026..8024
DNA (999bp) protein (333aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fructose 1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=7 Tax=Enterobacteriaceae RepID=I6F4Z4_SHIFL
L3_122_031G1_scaffold_355_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8139..9251)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QWX2_CITFR
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ETX71913.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
chemotaxis protein
L3_122_031G1_scaffold_355_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9355..10356)
DNA (1002bp) protein (334aa)
Inner membrane ABC transporter permease YjfF n=6 Tax=Citrobacter RepID=J1G047_9ENTR
Inner membrane ABC transporter permease yjfF {ECO:0000313|EMBL:ETX71912.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
ABC transporter permease
L3_122_031G1_scaffold_355_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10343..11365)
DNA (1023bp) protein (341aa)
ABC transporter n=6 Tax=Citrobacter RepID=K8R0M8_CITFR
Inner membrane ABC transporter permease ytfT {ECO:0000313|EMBL:ETX71911.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
sugar ABC transporter permease
L3_122_031G1_scaffold_355_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11379..12881)
DNA (1503bp) protein (501aa)
Putative sugar transporter subunit n=2 Tax=Citrobacter freundii RepID=K8QNL5_CITFR
ABC transporter family protein {ECO:0000313|EMBL:KEL78927.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
sugar ABC transporter ATP-binding protein
L3_122_031G1_scaffold_355_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12984..13940)
DNA (957bp) protein (319aa)
ABC transporter periplasmic-binding protein ytfQ n=6 Tax=Citrobacter RepID=G9SEZ2_CITFR
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJC13705.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sugar ABC transporter substrate-binding protein
L3_122_031G1_scaffold_355_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14250..14777
DNA (528bp) protein (176aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=11 Tax=Citrobacter RepID=D4BFR9_9ENTR
L3_122_031G1_scaffold_355_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14882..15226)
DNA (345bp) protein (115aa)
Gamma-glutamylcyclotransferase ytfP n=10 Tax=Enterobacteriaceae RepID=C1MBW4_9ENTR
gamma-glutamylcyclotransferase
Gamma-glutamylcyclotransferase {ECO:0000313|EMBL:AHY11591.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L3_122_031G1_scaffold_355_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15229..19005)
DNA (3777bp) protein (1259aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2E1_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL78933.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_122_031G1_scaffold_355_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19002..20735)
DNA (1734bp) protein (578aa)
Outer membrane protein and surface antigen n=1 Tax=Citrobacter sp. KTE32 RepID=R8VNH5_9ENTR
Outer membrane protein {ECO:0000313|EMBL:ETX71905.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L3_122_031G1_scaffold_355_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20948..21586
DNA (639bp) protein (213aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Citrobacter sp. KTE30 RepID=R8V6Y5_9ENTR
L3_122_031G1_scaffold_355_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21594..22649)
DNA (1056bp) protein (352aa)
Transcriptional regulator n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNK6_CITFR
LacI family transcriptional regulator {ECO:0000313|EMBL:ETX71903.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
L3_122_031G1_scaffold_355_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22840..23994
DNA (1155bp) protein (385aa)
Oxidoreductase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQQ0_CITFR
Oxidoreductase {ECO:0000313|EMBL:ETX71902.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
oxidoreductase
L3_122_031G1_scaffold_355_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24011..25195
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8V2D6_9ENTR
Oxidoreductase {ECO:0000313|EMBL:KJC07776.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
oxidoreductase
L3_122_031G1_scaffold_355_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25192..26259
DNA (1068bp) protein (356aa)
Oxidoreductase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QS71_CITFR
Oxidoreductase {ECO:0000313|EMBL:KJC07777.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
oxidoreductase
L3_122_031G1_scaffold_355_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26271..27293
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8R0K5_CITFR
Oxidoreductase {ECO:0000313|EMBL:KJC07778.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Predicted dehydrogenases and related proteins
L3_122_031G1_scaffold_355_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27375..28919
DNA (1545bp) protein (515aa)
Protein YnaJ n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QNK1_CITFR
Major facilitator transporter {ECO:0000313|EMBL:KJC07779.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
major facilitator transporter
L3_122_031G1_scaffold_355_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28930..30000
DNA (1071bp) protein (357aa)
Beta-1,4-xylanase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QQP5_CITFR
1,4-beta-xylanase {ECO:0000313|EMBL:KJC07780.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_355_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30281..31621
DNA (1341bp) protein (447aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=D4BFR2_9ENTR
membrane protein
UPF0053 inner membrane protein ytfL {ECO:0000313|EMBL:KDF09517.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
L3_122_031G1_scaffold_355_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31688..31894)
DNA (207bp) protein (69aa)
Uncharacterized protein n=12 Tax=Enterobacteriaceae RepID=C1MBV9_9ENTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX71894.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Displaying items 1-30 of 45 in total

View Taxonomy