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L3_122_031G1_scaffold_397

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Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_397_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(121..990)
DNA (870bp) protein (290aa)
Transcriptional regulator, AraC family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLH5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83731.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
msmR1; Msm operon regulatory protein MsmR
L3_122_031G1_scaffold_397_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1177..3369
DNA (2193bp) protein (731aa)
agaR; alpha-galactosidase 1 (EC:3.2.1.22)
Alpha-galactosidase AgaN n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83742.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_122_031G1_scaffold_397_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3627..4904
DNA (1278bp) protein (426aa)
ABC transporter, substrate-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCC5_CLOBU
N-Acetyl-D-glucosamine ABC transport system, sugar-binding protein {ECO:0000313|EMBL:KJZ83749.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter substrate-binding protein
L3_122_031G1_scaffold_397_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4994..5926
DNA (933bp) protein (311aa)
ABC transporter, permease protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGA5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83965.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ABC transporter permease
L3_122_031G1_scaffold_397_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5946..6773
DNA (828bp) protein (276aa)
L-arabinose transport system permease protein AraQ n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K823_CLOBU
N-Acetyl-D-glucosamine ABC transport system, permease protein 2 {ECO:0000313|EMBL:KJZ83758.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ABC transporter permease
L3_122_031G1_scaffold_397_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7080..7664
DNA (585bp) protein (195aa)
Methyl-accepting chemotaxis protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI1_CLOBU
Chemotaxis protein {ECO:0000313|EMBL:KHD16483.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
mcpB2; methyl-accepting chemotaxis protein McpB
L3_122_031G1_scaffold_397_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7664..8242
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z7I0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35650.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis sensory transducer
L3_122_031G1_scaffold_397_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8361..9101)
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWD2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP54912.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_122_031G1_scaffold_397_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9104..10465)
DNA (1362bp) protein (454aa)
Radical SAM n=2 Tax=Clostridium butyricum RepID=B1QWD3_CLOBU
Radical SAM domain protein {ECO:0000313|EMBL:EEP53077.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
radical SAM
L3_122_031G1_scaffold_397_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10628..11155)
DNA (528bp) protein (176aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QWD4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83736.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
RNA-binding region-containing protein (RNP-1)
L3_122_031G1_scaffold_397_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11642..12583
DNA (942bp) protein (314aa)
glucokinase (EC:2.7.1.2)
Glucose kinase n=3 Tax=Clostridium butyricum RepID=B1QWD5_CLOBU
Putative glucokinase {ECO:0000313|EMBL:EEP54205.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_122_031G1_scaffold_397_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12870..13562
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLI5_CLOBU
Putative HD superfamily hydrolase {ECO:0000313|EMBL:KJZ83752.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_122_031G1_scaffold_397_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13782..15341
DNA (1560bp) protein (520aa)
Alkaline phosphatase {ECO:0000313|EMBL:KJZ83740.1}; EC=3.1.3.1 {ECO:0000313|EMBL:KJZ83740.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
phoA; alkaline phosphatase 4 (EC:3.1.3.1)
Alkaline phosphatase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT4_CLOBU
L3_122_031G1_scaffold_397_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15358..16524
DNA (1167bp) protein (389aa)
YibE/F family protein n=3 Tax=Clostridium butyricum RepID=M8JCD2_CLOBU
Multitransmembrane protein-like protein {ECO:0000313|EMBL:KJZ83744.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
YibE/F family protein
L3_122_031G1_scaffold_397_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17041..17853
DNA (813bp) protein (271aa)
S-adenosylmethionine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00039304}; Short=AdoMetDC {ECO:0000256|HAMAP-Rule:MF_00465};; Short=SAMDC {ECO:0000256|HAMAP-Rule:MF_00465};; EC=4.1.1.50 {ECO:0000256|HAMAP-Rule:MF_00465, ECO:0000256|SAAS:SAAS00093036};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
speD; S-adenosylmethionine decarboxylase proenzyme (EC:4.1.1.50)
S-adenosylmethionine decarboxylase proenzyme n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGB2_CLOBU
L3_122_031G1_scaffold_397_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17916..19331
DNA (1416bp) protein (472aa)
Arginine 2-monooxygenase {ECO:0000313|EMBL:EEP52908.1}; EC=4.1.1.19 {ECO:0000313|EMBL:EEP52908.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
arginine decarboxylase (EC:4.1.1.19)
Arginine decarboxylase n=2 Tax=Clostridium butyricum RepID=B1QWE0_CLOBU
L3_122_031G1_scaffold_397_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19414..20268
DNA (855bp) protein (285aa)
speE; spermidine synthase SpeE (EC:2.5.1.16)
Spermidine synthase n=3 Tax=Clostridium butyricum RepID=B1QWE1_CLOBU
Polyamine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Putrescine aminopropyltransferase {ECO:0000256|HAMAP-Rule:MF_00198}; Spermidine synthase {ECO:0000256|HAMAP-Rule:MF_00198}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
L3_122_031G1_scaffold_397_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20327..21526
DNA (1200bp) protein (400aa)
Putative Carboxynorspermidine dehydrogenase {ECO:0000313|EMBL:KJZ83762.1}; EC=1.1.1.- {ECO:0000313|EMBL:KJZ83762.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
saccharopine dehydrogenase (EC:1.5.1.7)
Saccharopine dehydrogenase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMT8_CLOBU
L3_122_031G1_scaffold_397_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21665..22810
DNA (1146bp) protein (382aa)
Carboxynorspermidine decarboxylase n=2 Tax=Clostridium butyricum RepID=B1QWE3_CLOBU
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:EEP53619.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
nspC; carboxynorspermidine decarboxylase
L3_122_031G1_scaffold_397_20
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22865..23716
DNA (852bp) protein (284aa)
Agmatinase {ECO:0000313|EMBL:KJZ85311.1}; EC=3.5.3.11 {ECO:0000313|EMBL:KJZ85311.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
speB; agmatinase SpeB (EC:3.5.3.11)
Agmatinase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KGB7_CLOBU
L3_122_031G1_scaffold_397_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23859..24350
DNA (492bp) protein (164aa)
Flavodoxin n=4 Tax=Clostridium butyricum RepID=B1QWE5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83775.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
floX; flavodoxin FloX
L3_122_031G1_scaffold_397_22
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24374..24895
DNA (522bp) protein (174aa)
putative NADH dehydrogenase/NAD(P)H nitroreductase (EC:1.-.-.-)
Fmn/NADPH-binding flavoprotein n=2 Tax=Clostridium butyricum RepID=M8JLJ4_CLOBU
Putative NADH dehydrogenase/NAD(P)H nitroreductase {ECO:0000313|EMBL:KJZ85316.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
L3_122_031G1_scaffold_397_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25040..26041
DNA (1002bp) protein (334aa)
HTH-type transcriptional regulator EbgR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JMU3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35666.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
regulatory protein, LacI
L3_122_031G1_scaffold_397_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26287..27591
DNA (1305bp) protein (435aa)
Putative arabinose-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCE1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96972.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
extracellular solute-binding protein
L3_122_031G1_scaffold_397_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27757..28650
DNA (894bp) protein (298aa)
L-arabinose transport system permease protein AraP n=4 Tax=Clostridium butyricum RepID=B1QWE9_CLOBU
Nucleoside ABC transporter, permease protein 1 {ECO:0000313|EMBL:KJZ83768.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport systems inner membrane component
L3_122_031G1_scaffold_397_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28643..29485
DNA (843bp) protein (281aa)
Binding-protein-dependent transport system inner membrane component n=2 Tax=Clostridium butyricum RepID=M8K838_CLOBU
Alpha-arabinosides ABC transport system, permease protein AraQ {ECO:0000313|EMBL:KJZ83770.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
binding-protein-dependent transport systems inner membrane component
L3_122_031G1_scaffold_397_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29653..31737
DNA (2085bp) protein (695aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
pbg; beta-galactosidase Pbg (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z738_CLOBU
L3_122_031G1_scaffold_397_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31885..33579
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AUI3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35672.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
methyl-accepting chemotaxis protein
L3_122_031G1_scaffold_397_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33633..35426)
DNA (1794bp) protein (598aa)
Sensor histidine kinase n=2 Tax=Clostridium butyricum RepID=M8JCE5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35673.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
histidine kinase internal region
L3_122_031G1_scaffold_397_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35458..37005)
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ASI0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ35674.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
two component transcriptional regulator, AraC family
Displaying items 1-30 of 50 in total

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