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L3_122_031G1_scaffold_425

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_425_1
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..373
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IW94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44619.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Rubrerythrin
L3_122_031G1_scaffold_425_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(583..3231)
DNA (2649bp) protein (883aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative potassium/sodium efflux P-type ATPase, fungal-type n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CUH8_9CLOT
Putative potassium/sodium efflux P-type ATPase, fungal-type {ECO:0000313|EMBL:EEG57178.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_122_031G1_scaffold_425_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3639..4178)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EQN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEQ60328.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Predicted membrane protein
L3_122_031G1_scaffold_425_4
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4305..5414)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Roseburia RepID=R5HKC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY30205.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
radical SAM protein
L3_122_031G1_scaffold_425_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5431..6261)
DNA (831bp) protein (277aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
Purine nucleoside phosphorylase n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XD02_9CLOT
deoD; purine nucleoside phosphorylase
L3_122_031G1_scaffold_425_6
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6495..7550)
DNA (1056bp) protein (352aa)
Putative ABC-type transport system periplasmic component/surface lipoprotein n=1 Tax=Clostridium sp. CAG:510 RepID=R6BXG1_9CLOT
Putative ABC-type transport system periplasmic component/surface lipoprotein {ECO:0000313|EMBL:CDA68823.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
ABC-type transport system, periplasmic component/surface lipoprotein
L3_122_031G1_scaffold_425_7
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7603..8544)
DNA (942bp) protein (314aa)
Putative ABC-type transport system permease component n=1 Tax=Clostridium sp. CAG:7 RepID=R5J598_9CLOT
Putative ABC-type transport system permease component {ECO:0000313|EMBL:CCY44216.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter permease
L3_122_031G1_scaffold_425_8
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8544..9605)
DNA (1062bp) protein (354aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5J5N6_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCY44217.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter permease
L3_122_031G1_scaffold_425_9
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9610..11124)
DNA (1515bp) protein (505aa)
ATPase component of uncharacterized ABC-type transporter n=1 Tax=Clostridium sp. CAG:7 RepID=R5IPV3_9CLOT
ATPase component of uncharacterized ABC-type transporter {ECO:0000313|EMBL:CCY44218.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ABC transporter ATPase
L3_122_031G1_scaffold_425_10
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11351..11794)
DNA (444bp) protein (148aa)
ribose-5-phosphate isomerase (EC:5.3.1.6)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8RKU0_9CLOT
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:CCY44631.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
L3_122_031G1_scaffold_425_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11795..12907)
DNA (1113bp) protein (371aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6W7_9CLOT
L3_122_031G1_scaffold_425_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12910..13968)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IR03_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44633.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
6-phosphogluconolactonase
L3_122_031G1_scaffold_425_13
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14280..14813
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY44634.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
XRE family transcriptional regulator
L3_122_031G1_scaffold_425_14
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14887..15963
DNA (1077bp) protein (359aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Spermidine/putrescine ABC transporter, ATP-binding protein PotA n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERY2_9FIRM
spermidine/putrescine ABC transporter ATPase
L3_122_031G1_scaffold_425_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15956..16795
DNA (840bp) protein (280aa)
ABC transporter, permease protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERY1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHE99114.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_122_031G1_scaffold_425_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16795..17586
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HIC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99115.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Spermidine/putrescine-binding periplasmic protein
L3_122_031G1_scaffold_425_17
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17648..18754
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KK16_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62482.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
extracellular solute-binding protein
L3_122_031G1_scaffold_425_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18838..19965
DNA (1128bp) protein (376aa)
Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ERX9_9FIRM
Putative spermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein PotD {ECO:0000313|EMBL:EEQ60773.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
extracellular solute-binding protein
L3_122_031G1_scaffold_425_19
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20223..20993
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6LQL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB76422.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
hypothetical protein
L3_122_031G1_scaffold_425_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21258..21674
DNA (417bp) protein (139aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RKV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18066.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
DtxR family iron (metal) dependent repressor
L3_122_031G1_scaffold_425_21
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21667..22236
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F6T4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY00770.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
nitroreductase
L3_122_031G1_scaffold_425_22
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22382..23392)
DNA (1011bp) protein (337aa)
Inosine-uridine preferring nucleoside hydrolase n=2 Tax=Oribacterium RepID=F5T7C2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14392.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
inosine/uridine-preferring nucleoside hydrolase
L3_122_031G1_scaffold_425_23
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23392..24024)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WR57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14393.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
hypothetical protein
L3_122_031G1_scaffold_425_24
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24040..24993)
DNA (954bp) protein (318aa)
Cytidine/uridine-specific hydrolase {ECO:0000313|EMBL:EGL36864.1}; EC=3.2.-.- {ECO:0000313|EMBL:EGL36864.1};; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
Cytidine/uridine-specific hydrolase n=2 Tax=Oribacterium RepID=F5T7C0_9FIRM
inosine/uridine-preferring nucleoside hydrolase
L3_122_031G1_scaffold_425_25
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25013..25957)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Oribacterium sp. ACB7 RepID=G9WR59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14395.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
ABC transporter permease
L3_122_031G1_scaffold_425_26
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25960..27048)
DNA (1089bp) protein (363aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Oribacterium RepID=F5T7B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14396.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
ABC transporter permease
L3_122_031G1_scaffold_425_27
Oribacterium asaccharolyticum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27045..28595)
DNA (1551bp) protein (517aa)
ABC transporter, ATP-binding protein n=2 Tax=Oribacterium RepID=F5T7B7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL14397.1}; TaxID=796944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium asaccharolyticum ACB7.;"
ABC transporter ATP-binding protein
L3_122_031G1_scaffold_425_28
Oribacterium sp. oral taxon 108, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28665..29786)
DNA (1122bp) protein (374aa)
Basic membrane protein n=1 Tax=Oribacterium sp. oral taxon 108 str. F0425 RepID=F5T7B6_9FIRM
Basic membrane protein {ECO:0000313|EMBL:EGL36515.1}; TaxID=904296 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium sp. oral taxon 108 str. F0425.;"
basic membrane lipoprotein
L3_122_031G1_scaffold_425_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29842..30738)
DNA (897bp) protein (299aa)
Sugar kinases, ribokinase family (EC:2.7.1.15)
Sugar kinases ribokinase family n=1 Tax=Clostridium sp. CAG:58 RepID=R6RW14_9CLOT
Sugar kinases ribokinase family {ECO:0000313|EMBL:CDC49504.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_122_031G1_scaffold_425_30
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30931..32811
DNA (1881bp) protein (627aa)
Transcriptional regulators (EC:2.7.1.15)
Transcriptional regulators {ECO:0000313|EMBL:CBL42851.1}; EC=2.7.1.15 {ECO:0000313|EMBL:CBL42851.1};; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Transcriptional regulators n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GPW6_9FIRM
Displaying items 1-30 of 37 in total

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