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L3_122_031G1_scaffold_463

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_463_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(54..2276)
DNA (2223bp) protein (741aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8R1Z5_CITFR
Membrane protein {ECO:0000313|EMBL:KJC04604.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L3_122_031G1_scaffold_463_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2781..3893)
DNA (1113bp) protein (371aa)
Peptidyl-arginine deiminase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DIB1_CITFR
Agmatine deiminase {ECO:0000313|EMBL:KJC04605.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
peptidyl-arginine deiminase
L3_122_031G1_scaffold_463_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4297..4860
DNA (564bp) protein (188aa)
Intracellular protease PfpI family protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CUA3_CITFR
Intracellular protease/amidase {ECO:0000313|EMBL:ETX65349.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
glutamine amidotransferase
L3_122_031G1_scaffold_463_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4917..5663)
DNA (747bp) protein (249aa)
Sam-dependent methyltransferase n=3 Tax=Citrobacter RepID=J0M1G3_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13056.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_463_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5674..5931)
DNA (258bp) protein (86aa)
UPF0386 protein HMPREF9428_00086 n=7 Tax=Citrobacter RepID=G9SFU8_CITFR
UPF0386 protein YjhX {ECO:0000256|HAMAP-Rule:MF_00827}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_122_031G1_scaffold_463_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7249..8505
DNA (1257bp) protein (419aa)
Peptidase T {ECO:0000256|SAAS:SAAS00064331}; EC=3.-.-.- {ECO:0000256|SAAS:SAAS00279025};; EC=3.4.11.- {ECO:0000256|SAAS:SAAS00275860};; EC=3.4.11.4 {ECO:0000256|SAAS:SAAS00064282};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
Peptidase T n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DHC9_CITFR
peptidase M20
L3_122_031G1_scaffold_463_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8502..9863
DNA (1362bp) protein (454aa)
Anaerobic C4-dicarboxylate uptake C (DcuC) family transporter n=4 Tax=Citrobacter RepID=G9SFV0_CITFR
Anaerobic C4-dicarboxylate transporter DcuC {ECO:0000313|EMBL:CDL40864.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
C4-dicarboxylate ABC transporter
L3_122_031G1_scaffold_463_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10186..10815
DNA (630bp) protein (210aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=J1G5L9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04611.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_463_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10912..11148
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BBF1_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KJC13060.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_463_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11250..11879)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QTJ6_CITFR
LysE type translocator family protein {ECO:0000313|EMBL:KEL80587.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lysine transporter LysE
L3_122_031G1_scaffold_463_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11989..12894
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UXT5_9ENTR
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC04614.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
LysR family transcriptional regulator
L3_122_031G1_scaffold_463_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13019..14002
DNA (984bp) protein (328aa)
Transcriptional regulator n=3 Tax=Citrobacter RepID=K8QQ01_CITFR
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KEL80585.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
AraC family transcriptional regulator
L3_122_031G1_scaffold_463_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14142..15788
DNA (1647bp) protein (549aa)
TonB-dependent siderophore receptor n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CU92_CITFR
Ferrioxamine B receptor {ECO:0000313|EMBL:KJC04616.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ferrioxamine B receptor
L3_122_031G1_scaffold_463_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15792..16232
DNA (441bp) protein (147aa)
TonB-dependent siderophore receptor n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CU92_CITFR
Ferrioxamine B receptor {ECO:0000313|EMBL:KJC13064.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ferrioxamine B receptor
L3_122_031G1_scaffold_463_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16332..16880)
DNA (549bp) protein (183aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0M1F4_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC13065.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_463_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17025..18122)
DNA (1098bp) protein (366aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CAL9_CITFR
Electron transporter YccM {ECO:0000313|EMBL:KJC04618.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
electron transporter YccM
L3_122_031G1_scaffold_463_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18342..19730)
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DHC1_CITFR
Diguanylate cyclase {ECO:0000313|EMBL:KJC04619.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
diguanylate cyclase
L3_122_031G1_scaffold_463_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19810..20442)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DI94_CITFR
Membrane protein {ECO:0000313|EMBL:KJC04620.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L3_122_031G1_scaffold_463_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20715..20990
DNA (276bp) protein (92aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=K8QRX7_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL80572.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_122_031G1_scaffold_463_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21023..22633)
DNA (1611bp) protein (537aa)
Propionate catabolism operon regulatory protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UY48_9ENTR
Propionate catabolism operon regulatory protein PrpR {ECO:0000313|EMBL:KJC04622.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
propionate catabolism operon regulatory protein PrpR
L3_122_031G1_scaffold_463_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22886..23767
DNA (882bp) protein (294aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
prpB; 2-methylisocitrate lyase (EC:4.1.3.30)
2-methylisocitrate lyase n=6 Tax=Citrobacter RepID=J0M836_9ENTR
L3_122_031G1_scaffold_463_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23848..25017
DNA (1170bp) protein (390aa)
methylcitrate synthase (EC:2.3.3.5)
Citrate synthase n=2 Tax=Citrobacter freundii RepID=K8R1X2_CITFR
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L3_122_031G1_scaffold_463_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25180..26631
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:KJC04625.1}; EC=4.2.1.79 {ECO:0000313|EMBL:KJC04625.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UYX5_9ENTR
L3_122_031G1_scaffold_463_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26672..28558
DNA (1887bp) protein (629aa)
prpE; propionyl-CoA synthetase (EC:6.2.1.17)
Propionyl-CoA synthetase n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CU81_CITFR
Propionate-CoA ligase {ECO:0000313|EMBL:ETX72414.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L3_122_031G1_scaffold_463_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28603..28875)
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Citrobacter RepID=K8QY43_CITFR
Lipoprotein {ECO:0000313|EMBL:KJC04627.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_463_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29030..30283)
DNA (1254bp) protein (418aa)
Galactoside permease n=2 Tax=Citrobacter RepID=M3CAK6_CITFR
Galactoside permease {ECO:0000313|EMBL:KJC04628.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lacY; galactoside permease
L3_122_031G1_scaffold_463_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30335..33418)
DNA (3084bp) protein (1028aa)
Beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613}; Short=Beta-gal {ECO:0000256|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|HAMAP-Rule:MF_01687}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lacZ; beta-D-galactosidase (EC:3.2.1.23)
Beta-galactosidase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UX70_9ENTR
L3_122_031G1_scaffold_463_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33540..34622)
DNA (1083bp) protein (361aa)
Lac repressor n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QPY0_CITFR
Lactose operon repressor {ECO:0000313|EMBL:KEL80561.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
lacI; lac repressor
L3_122_031G1_scaffold_463_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34658..35395
DNA (738bp) protein (246aa)
Methyltransferase type 11 n=2 Tax=Citrobacter RepID=J0M1D6_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72419.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
methyltransferase
L3_122_031G1_scaffold_463_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35392..36342)
DNA (951bp) protein (317aa)
AraC family transcriptional regulator n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QY38_CITFR
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC04632.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
AraC family transcriptional regulator
Displaying items 1-30 of 33 in total

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