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L3_122_031G1_scaffold_520

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Displaying items 1-30 of 68 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_520_1
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..185)
DNA (183bp) protein (61aa)
cystathionine gamma-synthase (EC:2.5.1.48)
Cystathionine gamma-synthase {ECO:0000313|EMBL:ESE87905.1}; EC=2.5.1.48 {ECO:0000313|EMBL:ESE87905.1};; TaxID=1173950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. indica serovar 6,14,25:z10:1,(2),7 str.; 1121.;"
Cystathionine gamma-synthase n=196 Tax=Salmonella enterica I RepID=V5VQV1_SALET
L3_122_031G1_scaffold_520_2
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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450..767
DNA (318bp) protein (106aa)
Met repressor n=7 Tax=Enterobacteriaceae RepID=I6HEX5_SHIFL
Met repressor {ECO:0000256|HAMAP-Rule:MF_00744, ECO:0000256|SAAS:SAAS00012444}; Met regulon regulatory protein MetJ {ECO:0000256|HAMAP-Rule:MF_00744}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
transcriptional repressor protein MetJ
L3_122_031G1_scaffold_520_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(820..2244)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UI70_9ENTR
Melibiose carrier protein {ECO:0000313|EMBL:KJC04010.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
melibiose carrier protein
L3_122_031G1_scaffold_520_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2323..3003)
DNA (681bp) protein (227aa)
Oligogalacturonate-specific porin n=6 Tax=Citrobacter RepID=K8QNY6_CITFR
Oligogalacturonate-specific porin family protein {ECO:0000313|EMBL:KEL77793.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_122_031G1_scaffold_520_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3342..3554)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 n=8 Tax=Enterobacteriaceae RepID=G9S904_CITFR
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
rpmE; 50S ribosomal protein L31
L3_122_031G1_scaffold_520_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3663..5861
DNA (2199bp) protein (733aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
Primosome assembly protein PriA n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3C887_CITFR
primosome assembly protein PriA
L3_122_031G1_scaffold_520_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6018..7043
DNA (1026bp) protein (342aa)
Transcriptional repressor CytR n=6 Tax=Citrobacter RepID=J0VNF2_9ENTR
transcriptional regulator
Periplasmic binding s and sugar binding domain of LacI family protein {ECO:0000313|EMBL:KEL77789.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L3_122_031G1_scaffold_520_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7242..8111
DNA (870bp) protein (290aa)
Cell division protein ftsN n=2 Tax=Citrobacter RepID=R8UXE7_9ENTR
Cell division protein FtsN {ECO:0000313|EMBL:KJC04015.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
cell division protein FtsN
L3_122_031G1_scaffold_520_9
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8203..8733
DNA (531bp) protein (177aa)
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
ATP-dependent protease subunit HslV n=11 Tax=Enterobacteriaceae RepID=C1MFY6_9ENTR
L3_122_031G1_scaffold_520_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8743..10074
DNA (1332bp) protein (444aa)
ATP-dependent protease ATPase subunit HslU n=11 Tax=Enterobacteriaceae RepID=C1MFY5_9ENTR
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Heat shock protein HslU {ECO:0000256|HAMAP-Rule:MF_00249}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hslU; ATP-dependent protease ATP-binding subunit HslU
L3_122_031G1_scaffold_520_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10142..11071
DNA (930bp) protein (310aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=6 Tax=Citrobacter RepID=J0M239_9ENTR
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L3_122_031G1_scaffold_520_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11164..11649
DNA (486bp) protein (162aa)
Regulator of ribonuclease activity A n=7 Tax=Enterobacteriaceae RepID=I6HEY6_SHIFL
Regulator of ribonuclease activity A {ECO:0000256|HAMAP-Rule:MF_00471, ECO:0000256|SAAS:SAAS00043861}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
ribonuclease activity regulator protein RraA
L3_122_031G1_scaffold_520_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11811..12554
DNA (744bp) protein (248aa)
Short-chain dehydrogenase/reductase SDR n=3 Tax=Citrobacter RepID=K8QLN4_CITFR
Short chain dehydrogenase family protein {ECO:0000313|EMBL:KEL77783.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
short-chain dehydrogenase/reductase SDR
L3_122_031G1_scaffold_520_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12757..12996)
DNA (240bp) protein (80aa)
Cell division protein ZapB n=6 Tax=Citrobacter RepID=J1FZQ9_9ENTR
Cell division protein ZapB {ECO:0000256|HAMAP-Rule:MF_01196, ECO:0000256|SAAS:SAAS00064905}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
septal ring assembly protein ZapB
L3_122_031G1_scaffold_520_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13431..14276
DNA (846bp) protein (282aa)
GlpF n=6 Tax=Citrobacter RepID=J0M235_9ENTR
Glycerol uptake facilitator protein {ECO:0000313|EMBL:CDL38467.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glycerol uptake facilitator GlpF
L3_122_031G1_scaffold_520_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14298..15806
DNA (1509bp) protein (503aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
glpK; glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=7 Tax=Citrobacter RepID=C1MFY0_9ENTR
L3_122_031G1_scaffold_520_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15942..16952
DNA (1011bp) protein (337aa)
Fructose-1,6-bisphosphatase n=2 Tax=Citrobacter RepID=K8QYN3_CITFR
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fructose 1,6-bisphosphatase
L3_122_031G1_scaffold_520_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17048..17794
DNA (747bp) protein (249aa)
Ferredoxin--NADP reductase {ECO:0000313|EMBL:KEL77778.1}; EC=1.18.1.2 {ECO:0000313|EMBL:KEL77778.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Ferredoxin-NADP reductase n=3 Tax=Citrobacter RepID=K8QLM9_CITFR
ferredoxin-NADP reductase
L3_122_031G1_scaffold_520_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17852..18280)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=Citrobacter freundii RepID=K8QNX3_CITFR
Membrane protein {ECO:0000313|EMBL:KJC07431.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
membrane protein
L3_122_031G1_scaffold_520_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18381..18977
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UJ10_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC04026.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_122_031G1_scaffold_520_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18977..19087
DNA (111bp) protein (37aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=J0VND9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67091.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_122_031G1_scaffold_520_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19089..19856
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=13 Tax=Enterobacteriaceae RepID=C1MFX5_9ENTR
L3_122_031G1_scaffold_520_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19896..21368)
DNA (1473bp) protein (491aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE30 RepID=R8UI51_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX67089.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
C4-dicarboxylate ABC transporter
L3_122_031G1_scaffold_520_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21482..22786)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QLM5_CITFR
Citrate transporter {ECO:0000313|EMBL:KJC04029.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
citrate transporter
L3_122_031G1_scaffold_520_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22860..23609)
DNA (750bp) protein (250aa)
CDP-diacylglycerol pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00319}; EC=3.6.1.26 {ECO:0000256|HAMAP-Rule:MF_00319};; CDP-diacylglycerol phosphatidylhydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; CDP-diglyceride hydrolase {ECO:0000256|HAMAP-Rule:MF_00319}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
CDP-diacylglycerol pyrophosphatase n=1 Tax=Citrobacter sp. KTE30 RepID=R8UJ05_9ENTR
CDP-diacylglycerol pyrophosphatase
L3_122_031G1_scaffold_520_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23714..24703)
DNA (990bp) protein (330aa)
Sulfate transporter subunit n=3 Tax=Citrobacter RepID=K8QUX3_CITFR
Sulfate transporter subunit {ECO:0000313|EMBL:KJC04031.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sulfate transporter subunit
L3_122_031G1_scaffold_520_27
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24907..25869)
DNA (963bp) protein (321aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=9 Tax=Citrobacter RepID=J1FZX2_9ENTR
L3_122_031G1_scaffold_520_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26053..26955)
DNA (903bp) protein (301aa)
Cation-efflux pump FieF n=6 Tax=Citrobacter RepID=J0LVR6_9ENTR
Cation-efflux pump FieF {ECO:0000256|HAMAP-Rule:MF_01425}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fieF; ferrous iron transporter
L3_122_031G1_scaffold_520_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27103..27603)
DNA (501bp) protein (167aa)
Periplasmic repressor CpxP n=6 Tax=Citrobacter RepID=J0VNC8_9ENTR
Periplasmic protein CpxP {ECO:0000313|EMBL:KEL77762.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cpxP; periplasmic repressor CpxP
L3_122_031G1_scaffold_520_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27754..28452
DNA (699bp) protein (233aa)
Transcriptional regulatory protein CpxR n=8 Tax=Citrobacter RepID=C1MFW7_9ENTR
Transcriptional regulatory protein CpxR {ECO:0000313|EMBL:ETX67080.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
transcriptional regulator
Displaying items 1-30 of 68 in total

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