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L3_122_031G1_scaffold_581

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_581_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(579..2228)
DNA (1650bp) protein (550aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBK71323.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK71323.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAX0_BIFLN
L3_122_031G1_scaffold_581_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2443..3441)
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium longum RepID=C2GXZ2_BIFLN
LacI family transcription regulator
LacI family transcription regulator {ECO:0000313|EMBL:AIW43114.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_581_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3996..5282
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=9 Tax=Bifidobacterium longum RepID=C5E953_BIFLI
transport protein
MFS transporter {ECO:0000313|EMBL:AIW43113.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_581_4
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5399..7315)
DNA (1917bp) protein (639aa)
Thioredoxin-disulfide reductase n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XXU6_9BIFI
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EFV37584.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
thioredoxin reductase
L3_122_031G1_scaffold_581_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7483..8046)
DNA (564bp) protein (188aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=3 Tax=Bifidobacterium longum subsp. longum RepID=D6ZX77_BIFLJ
alkyl hydroperoxide reductase
Peroxiredoxin {ECO:0000313|EMBL:BAP82697.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_122_031G1_scaffold_581_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8253..8936
DNA (684bp) protein (228aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Carbonic anhydrase n=3 Tax=Bifidobacterium longum RepID=D6DAX6_BIFLN
carbonic anhydrase
L3_122_031G1_scaffold_581_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9195..10538
DNA (1344bp) protein (448aa)
Putative uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=E8MWL7_BIFL1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI98439.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_031G1_scaffold_581_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10635..11114
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage n=18 Tax=Bifidobacterium RepID=B3DNZ6_BIFLD
dps; dps
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:CBK71331.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_581_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11349..12662
DNA (1314bp) protein (438aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B7GSI4_BIFLS
hypothetical protein
Putative AAA+ superfamily ATPase {ECO:0000313|EMBL:ACD98856.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_581_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12921..13286)
DNA (366bp) protein (122aa)
Gluconate kinase n=16 Tax=Bifidobacterium RepID=B3DP00_BIFLD
carbohydrate kinase
Gluconate kinase {ECO:0000313|EMBL:ACD98859.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_581_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13373..14188)
DNA (816bp) protein (272aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium RepID=D6DAY2_BIFLN
Predicted metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CBK71335.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_581_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14316..15641)
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase n=3 Tax=Bifidobacterium longum RepID=B3DP03_BIFLD
gabT; 4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACD98862.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_031G1_scaffold_581_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16174..17544
DNA (1371bp) protein (457aa)
Transcriptional regulator n=3 Tax=Bifidobacterium RepID=F8APB5_BIFLN
transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:KEY30864.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_031G1_scaffold_581_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17936..18271
DNA (336bp) protein (112aa)
Transposase n=7 Tax=Bifidobacterium longum subsp. longum RepID=E4R1L9_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71338.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_122_031G1_scaffold_581_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18847..19092)
DNA (246bp) protein (82aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B3DP07_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEY24035.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_581_16
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19206..20117)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5E968_BIFLI
Uncharacterized protein {ECO:0000313|EMBL:EFV37572.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
hypothetical protein
L3_122_031G1_scaffold_581_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20068..20664)
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G6L3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV32647.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_031G1_scaffold_581_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20925..21917
DNA (993bp) protein (331aa)
Uncharacterized protein n=3 Tax=Bifidobacterium longum RepID=V6XW25_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV32646.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_031G1_scaffold_581_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21932..23266)
DNA (1335bp) protein (445aa)
Aspartate/tyrosine/aromatic aminotransferase n=13 Tax=Bifidobacterium RepID=B3DP11_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43103.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_031G1_scaffold_581_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23472..23906
DNA (435bp) protein (145aa)
Transcriptional regulator n=19 Tax=Bifidobacterium RepID=B3DP12_BIFLD
transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KEY24040.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_031G1_scaffold_581_21
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24225..25571
DNA (1347bp) protein (449aa)
Glutamate dehydrogenase n=18 Tax=Bifidobacterium RepID=B3DP13_BIFLD
glutamate dehydrogenase
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_031G1_scaffold_581_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25969..26142)
DNA (174bp) protein (58aa)
Pectinesterase {ECO:0000313|EMBL:ESV32642.1}; EC=3.1.1.11 {ECO:0000313|EMBL:ESV32642.1};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Putative pectinesterase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MWK3_BIFL1
pectinesterase
L3_122_031G1_scaffold_581_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26102..27556)
DNA (1455bp) protein (485aa)
Pectinesterase n=9 Tax=Bifidobacterium RepID=V6XTU7_BIFLN
pectinesterase
Pectinesterase {ECO:0000313|EMBL:EIJ24300.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_581_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27553..28266)
DNA (714bp) protein (238aa)
Uncharacterized protein n=10 Tax=Bifidobacterium RepID=C5E975_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ24301.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_031G1_scaffold_581_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28953..29519)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX60_BIFLJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99506.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_122_031G1_scaffold_581_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(29589..32240)
DNA (2652bp) protein (884aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA gyrase subunit A n=12 Tax=Bifidobacterium longum RepID=B3DP17_BIFLD
DNA gyrase subunit A
L3_122_031G1_scaffold_581_27
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32308..34446)
DNA (2139bp) protein (713aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=2 Tax=Bifidobacterium RepID=E5XXS3_9BIFI
L3_122_031G1_scaffold_581_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34579..35049)
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX57_BIFLJ
hypothetical protein
Zn-ribbon-containing RNA-binding protein {ECO:0000313|EMBL:KFI73212.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_122_031G1_scaffold_581_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35046..36233)
DNA (1188bp) protein (396aa)
DNA replication and repair protein RecF n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZX56_BIFLJ
DNA replication and repair protein RecF
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|SAAS:SAAS00122784}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_122_031G1_scaffold_581_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36312..37436)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
DNA polymerase III subunit beta n=17 Tax=Bifidobacterium RepID=B3DP21_BIFLD
DNA polymerase III subunit beta
Displaying items 1-30 of 41 in total

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