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L3_122_031G1_scaffold_624

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_624_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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44..229
DNA (186bp) protein (62aa)
Carbon storage regulator homolog n=2139 Tax=Bacteria RepID=CSRA_CITK8
csrA; carbon storage regulator
Carbon storage regulator {ECO:0000256|HAMAP-Rule:MF_00167}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_122_031G1_scaffold_624_2
Citrobacter koseri, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(699..1169)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Shigella flexneri RepID=Q83JZ2_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:ABV15112.1}; TaxID=290338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696).;"
conserved protein of unknown function
L3_122_031G1_scaffold_624_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1589..2155
DNA (567bp) protein (189aa)
Fructose-1-phosphate phosphatase YqaB n=145 Tax=Enterobacteriaceae RepID=YQAB_ECOLI
hypothetical protein
Phosphatase YqaB {ECO:0000313|EMBL:EOV77222.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_122_031G1_scaffold_624_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2152..2580
DNA (429bp) protein (143aa)
Inner membrane protein YqaA n=466 Tax=Enterobacteriaceae RepID=YQAA_ECOLI
hypothetical protein
Inner membrane protein yqaA {ECO:0000313|EMBL:KDY96931.1}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_122_031G1_scaffold_624_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2653..4209
DNA (1557bp) protein (519aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-Rule:MF_00578}; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_00578}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
gshA; gamma-glutamate-cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase n=578 Tax=Enterobacteriaceae RepID=GSH1_ECO45
L3_122_031G1_scaffold_624_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4359..4874
DNA (516bp) protein (172aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
S-ribosylhomocysteine lyase n=546 Tax=Enterobacteriaceae RepID=LUXS_ECO24
S-ribosylhomocysteinase
L3_122_031G1_scaffold_624_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4938..6476)
DNA (1539bp) protein (513aa)
Multidrug export protein EmrB n=871 Tax=Enterobacteriaceae RepID=EMRB_ECO57
emrB; multidrug resistance protein B
Multidrug resistance protein B {ECO:0000313|EMBL:EID67571.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
L3_122_031G1_scaffold_624_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6493..7665)
DNA (1173bp) protein (391aa)
Multidrug resistance protein A n=758 Tax=Enterobacteriaceae RepID=E2QQD9_ECOLX
emrA; multidrug efflux system
Multidrug efflux system protein EmrA {ECO:0000313|EMBL:AFH12473.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_122_031G1_scaffold_624_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7792..8322)
DNA (531bp) protein (177aa)
Transcriptional repressor MprA n=1233 Tax=Enterobacteriaceae RepID=MPRA_ECO57
mprA; transcriptional repressor MprA
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ESA85898.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_031G1_scaffold_624_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8413..8748)
DNA (336bp) protein (112aa)
Uncharacterized protein YgaH n=407 Tax=Enterobacteriaceae RepID=YGAH_ECOLI
ygaH; hypothetical protein
L-valine exporter {ECO:0000313|EMBL:EZE25899.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_122_031G1_scaffold_624_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8738..9475)
DNA (738bp) protein (246aa)
Inner membrane protein YgaZ n=230 Tax=Escherichia RepID=YGAZ_ECOLI
ygaZ; transporter
Inner membrane protein YgaZ {ECO:0000313|EMBL:KEO22733.1}; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
L3_122_031G1_scaffold_624_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9599..10783)
DNA (1185bp) protein (395aa)
Putative uncharacterized transporter YgaY n=344 Tax=Enterobacteriaceae RepID=YGAY_ECOLI
major facilitator superfamily transporter
Major Facilitator Superfamily protein {ECO:0000313|EMBL:EFZ58667.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_122_031G1_scaffold_624_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11075..12067)
DNA (993bp) protein (331aa)
High-affinity transport system for glycine betaine and proline n=283 Tax=Escherichia coli RepID=J7Q975_ECOLX
proX; glycine betaine transporter periplasmic subunit
Glycine betaine-binding periplasmic protein {ECO:0000313|EMBL:ENB11687.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
L3_122_031G1_scaffold_624_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12125..13189)
DNA (1065bp) protein (355aa)
Glycine betaine/L-proline transport system permease protein ProW n=176 Tax=Escherichia RepID=PROW_ECOLI
glycine betaine transporter membrane protein
Glycine betaine/L-proline ABC transporter, permease protein {ECO:0000313|EMBL:AFG41625.1}; TaxID=910348 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P12b.;"
L3_122_031G1_scaffold_624_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13182..14384)
DNA (1203bp) protein (401aa)
Glycine betaine/L-proline transport ATP-binding protein ProV n=2 Tax=Escherichia coli RepID=S1F2V2_ECOLX
proV; glycine betaine/L-proline ABC transporter ATP-binding protein
Glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:KEN96471.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L3_122_031G1_scaffold_624_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14738..15697)
DNA (960bp) protein (320aa)
nrdF; ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1268977 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113302.;"
Ribonucleoside-diphosphate reductase 2 subunit beta n=435 Tax=Enterobacteriaceae RepID=RIR4_ECOLI
L3_122_031G1_scaffold_624_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15707..17851)
DNA (2145bp) protein (715aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
nrdE; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase n=133 Tax=Escherichia RepID=A8A3F7_ECOHS
L3_122_031G1_scaffold_624_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17824..18234)
DNA (411bp) protein (137aa)
Protein NrdI n=922 Tax=Enterobacteriaceae RepID=NRDI_ECO57
hypothetical protein
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L3_122_031G1_scaffold_624_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18231..18476)
DNA (246bp) protein (82aa)
Glutaredoxin-like protein NrdH n=1203 Tax=Enterobacteriaceae RepID=NRDH_ECO57
nrdH; glutaredoxin-like protein NrdH
Glutaredoxin-like protein nrdH {ECO:0000313|EMBL:EQN25346.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_122_031G1_scaffold_624_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18724..19053)
DNA (330bp) protein (110aa)
Uncharacterized protein YgaM n=1302 Tax=Enterobacteriaceae RepID=YGAM_ECO57
ygaM; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV64083.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_122_031G1_scaffold_624_21
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19205..19549
DNA (345bp) protein (115aa)
Uncharacterized protein YgaC n=1289 Tax=Enterobacteriaceae RepID=YGAC_ECO57
hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:EIQ34316.1}; TaxID=766140 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 4444-74.;"
L3_122_031G1_scaffold_624_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19586..20035)
DNA (450bp) protein (150aa)
L-alanine exporter AlaE n=1049 Tax=Enterobacteriaceae RepID=ALAE_ECO57
ygaW; inner membrane protein
L-alanine exporter AlaE {ECO:0000256|HAMAP-Rule:MF_00914}; TaxID=1051347 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3.4880.;"
L3_122_031G1_scaffold_624_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20703..21107
DNA (405bp) protein (135aa)
DNA-binding protein StpA n=978 Tax=Enterobacteriaceae RepID=STPA_ECO57
histone family protein nucleoid-structuring protein H-NS
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L3_122_031G1_scaffold_624_24
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21154..21678)
DNA (525bp) protein (175aa)
Predicted inner membrane protein with hydrolase activity n=25 Tax=Escherichia coli RepID=C6EJV7_ECOBD
rhodanese
Rhodanese-related sulfurtransferases {ECO:0000313|EMBL:CDK78027.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
L3_122_031G1_scaffold_624_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21688..21987)
DNA (300bp) protein (100aa)
Probable HTH-type transcriptional regulator YgaV n=848 Tax=Enterobacteriaceae RepID=YGAV_ECOLI
ArsR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ELE53886.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_122_031G1_scaffold_624_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22170..22328
DNA (159bp) protein (53aa)
UPF0057 membrane protein YqaE n=1411 Tax=Enterobacteriaceae RepID=YQAE_ECO57
yqaE; hypothetical protein
Proteolipid membrane potential modulator family protein {ECO:0000313|EMBL:EMW17925.1}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L3_122_031G1_scaffold_624_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22412..22861
DNA (450bp) protein (150aa)
Phospholipid-binding protein n=581 Tax=Enterobacteriaceae RepID=A7ZQ96_ECO24
ygaU; LysM domain/BON superfamily protein
Phospholipid-binding protein {ECO:0000313|EMBL:ADD57830.1}; TaxID=701177 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O55:H7 (strain CB9615 / EPEC).;"
L3_122_031G1_scaffold_624_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22862..23524)
DNA (663bp) protein (221aa)
HTH-type transcriptional repressor CsiR n=906 Tax=Enterobacteriaceae RepID=CSIR_ECOLI
DNA-binding transcriptional regulator CsiR
DNA-binding transcriptional dual regulator {ECO:0000313|EMBL:EGI44793.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_122_031G1_scaffold_624_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23545..24945)
DNA (1401bp) protein (467aa)
Transport permease protein of gamma-aminobutyrate n=283 Tax=Enterobacteriaceae RepID=C3SYF7_ECOLX
gabP; GabP APC transporter
GABA permease {ECO:0000313|EMBL:EGB66727.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
L3_122_031G1_scaffold_624_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25256..26536)
DNA (1281bp) protein (427aa)
gabT; 4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=23 Tax=Escherichia coli RepID=C6EJW3_ECOBD
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACT28123.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
Displaying items 1-30 of 34 in total

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