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L3_122_031G1_scaffold_642

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_642_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211..546)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002B92C70
hypothetical protein
PhnA protein {ECO:0000313|EMBL:EGW84792.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_122_031G1_scaffold_642_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

947..3175
DNA (2229bp) protein (743aa)
Clamp-binding protein CrfC n=105 Tax=cellular organisms RepID=CRFC_ECOLI
50S ribosome-binding GTPase family protein {ECO:0000313|EMBL:KDY57715.1}; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
hypothetical protein
L3_122_031G1_scaffold_642_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3172..4050
DNA (879bp) protein (293aa)
Uncharacterized protein YjcZ n=99 Tax=Escherichia RepID=YJCZ_ECOLI
hypothetical protein
YjcZ-like family protein {ECO:0000313|EMBL:KEL26443.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
L3_122_031G1_scaffold_642_4
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4314..5816
DNA (1503bp) protein (501aa)
Proline/betaine transporter n=467 Tax=Enterobacteriaceae RepID=PROP_ECO57
proline/glycine betaine transporter
Proline/betaine transporter {ECO:0000313|EMBL:EFP73322.1}; TaxID=754093 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae 1617.;"
L3_122_031G1_scaffold_642_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5928..6017
DNA (90bp) protein (30aa)
Putative membrane protein PmrR n=479 Tax=Escherichia RepID=PMRR_ECOLI
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOW14461.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_122_031G1_scaffold_642_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5993..7093)
DNA (1101bp) protein (367aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=656421 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M919.;"
Sensor protein BasS n=3 Tax=Escherichia coli RepID=L3ILJ0_ECOLX
basS; sensor protein BasS/PmrB
L3_122_031G1_scaffold_642_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7094..7762)
DNA (669bp) protein (223aa)
2-component regulatory system regulatory protein BasR n=875 Tax=Enterobacteriaceae RepID=C3SGU2_ECOLX
two-component response regulator
Two-component system {ECO:0000313|EMBL:EFE60305.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_122_031G1_scaffold_642_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7759..9402)
DNA (1644bp) protein (548aa)
Phosphoethanolamine transferase eptA {ECO:0000313|EMBL:EMX33525.1}; EC=2.7.-.- {ECO:0000313|EMBL:EMX33525.1};; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Phosphoethanolamine transferase eptA n=1 Tax=Escherichia coli MP021561.2 RepID=M9G1C1_ECOLX
putative cell division protein
L3_122_031G1_scaffold_642_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9506..10843)
DNA (1338bp) protein (446aa)
Arginine/agmatine antiporter n=1194 Tax=Enterobacteriaceae RepID=ADIC_ECO57
arginine:agmatin antiporter
Arginine/agmatine antiporter {ECO:0000313|EMBL:EOV68600.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_122_031G1_scaffold_642_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10980..11741)
DNA (762bp) protein (254aa)
HTH-type transcriptional regulator AdiY n=141 Tax=Enterobacteriaceae RepID=ADIY_ECOLI
hypothetical protein
HTH-type transcriptional regulator AdiY {ECO:0000313|EMBL:KDX88801.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L3_122_031G1_scaffold_642_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12065..14335)
DNA (2271bp) protein (757aa)
Biodegradative arginine decarboxylase {ECO:0000313|EMBL:KDU54332.1}; EC=4.1.1.19 {ECO:0000313|EMBL:KDU54332.1};; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
Biodegradative arginine decarboxylase n=1 Tax=Escherichia coli N1 RepID=K3KDU0_ECOLX
adiA; biodegradative arginine decarboxylase
L3_122_031G1_scaffold_642_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14531..15439)
DNA (909bp) protein (303aa)
Melibiose operon regulatory protein n=809 Tax=Enterobacteriaceae RepID=MELR_ECOL6
melR; DNA-binding transcriptional regulator MelR
Melibiose operon regulatory protein {ECO:0000313|EMBL:ESD65203.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_122_031G1_scaffold_642_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15722..17077
DNA (1356bp) protein (452aa)
Alpha-galactosidase {ECO:0000313|EMBL:KEN94080.1}; EC=3.2.1.22 {ECO:0000313|EMBL:KEN94080.1};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
Alpha-galactosidase n=149 Tax=Escherichia RepID=AGAL_ECOLI
glycoside hydrolase family protein
L3_122_031G1_scaffold_642_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17192..18601
DNA (1410bp) protein (470aa)
Melibiose carrier protein n=21 Tax=Escherichia coli RepID=B1LQD9_ECOSM
melibiose:sodium symporter
Melibiose carrier protein {ECO:0000313|EMBL:ELE55367.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L3_122_031G1_scaffold_642_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18740..19369)
DNA (630bp) protein (210aa)
Inner membrane protein YjdF n=121 Tax=Escherichia RepID=YJDF_ECOLI
hypothetical protein
Inner membrane protein yjdF {ECO:0000313|EMBL:KDX88807.1}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L3_122_031G1_scaffold_642_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19492..21138)
DNA (1647bp) protein (549aa)
Fumarate hydratase class I, anaerobic {ECO:0000313|EMBL:KDX22115.1}; EC=4.2.1.2 {ECO:0000313|EMBL:KDX22115.1};; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
Fumarate hydratase class I, anaerobic n=120 Tax=Escherichia RepID=FUMB_ECOLI
fumB; fumarate hydratase FumB
L3_122_031G1_scaffold_642_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21216..22556)
DNA (1341bp) protein (447aa)
Anaerobic C4-dicarboxylate transporter DcuB n=1353 Tax=Bacteria RepID=DCUB_ECO57
anaerobic C4-dicarboxylate transporter
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_122_031G1_scaffold_642_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23127..23846)
DNA (720bp) protein (240aa)
Transcriptional regulatory protein DcuR n=1093 Tax=Enterobacteriaceae RepID=DCUR_ECO57
DcuR family transcriptional regulator
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
L3_122_031G1_scaffold_642_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23843..25474)
DNA (1632bp) protein (544aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
sensory histidine kinase DcuS (EC:2.7.13.3)
Sensor histidine kinase DcuS n=484 Tax=Enterobacteriaceae RepID=DCUS_ECO57
L3_122_031G1_scaffold_642_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25655..25885
DNA (231bp) protein (77aa)
Uncharacterized protein YjdI n=459 Tax=Enterobacteriaceae RepID=YJDI_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEL26461.1}; TaxID=1444279 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C3.;"
L3_122_031G1_scaffold_642_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25897..26169
DNA (273bp) protein (91aa)
Uncharacterized protein YjdJ n=136 Tax=Escherichia RepID=YJDJ_ECOLI
hypothetical protein
Acetyltransferase family protein {ECO:0000313|EMBL:KDU31850.1}; TaxID=1444252 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C2.;"
L3_122_031G1_scaffold_642_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26396..26692
DNA (297bp) protein (99aa)
Uncharacterized protein YjdK n=938 Tax=Enterobacteriaceae RepID=YJDK_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK27508.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_122_031G1_scaffold_642_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27012..28529)
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
Lysine--tRNA ligase, heat inducible n=681 Tax=Escherichia RepID=SYK2_ECO57
lysyl-tRNA synthetase
L3_122_031G1_scaffold_642_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28766..30145)
DNA (1380bp) protein (460aa)
Amino acid/peptide transporter n=113 Tax=Escherichia coli RepID=A7ZV00_ECO24
yjdL; transporter
Amino acid/peptide transporter {ECO:0000313|EMBL:EFJ85280.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_122_031G1_scaffold_642_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30204..32351)
DNA (2148bp) protein (716aa)
Lysine decarboxylase, inducible {ECO:0000313|EMBL:EFU33784.1}; EC=4.1.1.18 {ECO:0000313|EMBL:EFU33784.1};; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
cadA; lysine decarboxylase 1 (EC:4.1.1.18)
Lysine decarboxylase, inducible n=797 Tax=Enterobacteriaceae RepID=LDCI_ECO57
L3_122_031G1_scaffold_642_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32431..33765)
DNA (1335bp) protein (445aa)
Probable cadaverine/lysine antiporter n=1294 Tax=Enterobacteriaceae RepID=CADB_ECO57
cadB; lysine/cadaverine antiporter
Transporter, basic amino acid/polyamine antiporter family protein {ECO:0000313|EMBL:KEJ64661.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L3_122_031G1_scaffold_642_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34130..35668)
DNA (1539bp) protein (513aa)
Transcriptional activator CadC n=102 Tax=Escherichia RepID=CADC_ECOLI
transcriptional regulator
Transcriptional activator CadC {ECO:0000313|EMBL:KEN85110.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_122_031G1_scaffold_642_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36274..36372)
DNA (99bp) protein (33aa)
Uncharacterized protein n=3 Tax=Escherichia coli RepID=B7LBZ3_ECO55
hypothetical protein
Chromosome, complete genome {ECO:0000313|EMBL:CAV01579.1}; TaxID=585055 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain 55989 / EAEC).;"
L3_122_031G1_scaffold_642_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36372..36905)
DNA (534bp) protein (178aa)
Transcriptional regulator, TetR family n=3 Tax=Escherichia coli RepID=D8C1N7_ECOLX
putative transcriptional regulator
HTH-type transcriptional regulator yjdC {ECO:0000313|EMBL:EQN17415.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_122_031G1_scaffold_642_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36942..38639)
DNA (1698bp) protein (566aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
Thiol:disulfide interchange protein DsbD n=14 Tax=Escherichia coli RepID=E2X242_ECOLX
dipZ; thiol:disulfide interchange protein
Displaying items 1-30 of 37 in total

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