ggKbase home page

L3_122_031G1_scaffold_677

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_677_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(219..662)
DNA (444bp) protein (148aa)
GCN5-related N-acetyltransferase n=48 Tax=Escherichia coli RepID=B1IUP0_ECOLC
hypothetical protein
Acetyltransferase {ECO:0000313|EMBL:EOW30682.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L3_122_031G1_scaffold_677_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

819..1748
DNA (930bp) protein (310aa)
metA; homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
Homoserine O-succinyltransferase n=155 Tax=Escherichia RepID=META_ECOLC
L3_122_031G1_scaffold_677_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2017..3618
DNA (1602bp) protein (534aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
malate synthase A (EC:2.3.3.9)
Malate synthase A n=124 Tax=Bacteria RepID=MASY_ECOLI
L3_122_031G1_scaffold_677_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3648..4952
DNA (1305bp) protein (435aa)
Isocitrate lyase {ECO:0000313|EMBL:KEN85131.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KEN85131.1};; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Isocitrate lyase n=972 Tax=Enterobacteriaceae RepID=ACEA_ECOL6
isocitrate lyase
L3_122_031G1_scaffold_677_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5233..6969
DNA (1737bp) protein (579aa)
Isocitrate dehydrogenase kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063056}; Short=IDH kinase/phosphatase {ECO:0000256|HAMAP-Rule:MF_00747};; Short=IDHK/P {ECO:0000256|HAMAP-Rule:MF_00747};; EC=2.7.11.5 {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063055};; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_00747, ECO:0000256|SAAS:SAAS00063053};; TaxID=749548 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 196-1.;"
Isocitrate dehydrogenase kinase/phosphatase n=105 Tax=Escherichia RepID=ACEK_ECOBW
aceK; isocitrate dehydrogenase kinase/phosphatase
L3_122_031G1_scaffold_677_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6938..8512)
DNA (1575bp) protein (525aa)
Ankyrin repeat protein ArpA n=13 Tax=Escherichia coli RepID=F4MCB2_ECOLX
Ankyrin repeat protein ArpA {ECO:0000313|EMBL:AEE59339.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
ankyrin repeat protein ArpA
L3_122_031G1_scaffold_677_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8829..9653)
DNA (825bp) protein (275aa)
Acetate operon repressor n=16 Tax=Enterobacteriaceae RepID=H9UZJ5_ECOLX
IclR family transcriptional regulator
Acetate operon repressor {ECO:0000313|EMBL:ESE05141.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L3_122_031G1_scaffold_677_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9853..13536
DNA (3684bp) protein (1228aa)
Methionine synthase {ECO:0000313|EMBL:KDU50630.1}; EC=2.1.1.13 {ECO:0000313|EMBL:KDU50630.1};; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
metH; B12-dependent methionine synthase (EC:2.1.1.13)
Methionine synthase n=206 Tax=Escherichia RepID=METH_ECOLI
L3_122_031G1_scaffold_677_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13756..15387
DNA (1632bp) protein (544aa)
Uncharacterized protein YjbB n=611 Tax=Enterobacteriaceae RepID=YJBB_ECOLI
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:ESD65922.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
putative transporter
L3_122_031G1_scaffold_677_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15478..16167)
DNA (690bp) protein (230aa)
peptidase E (EC:3.4.13.21)
Peptidase E {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013387}; EC=3.4.13.21 {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00013385};; Alpha-aspartyl dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510, ECO:0000256|SAAS:SAAS00085848}; Asp-specific dipeptidase {ECO:0000256|HAMAP-Rule:MF_00510}; Dipeptidase E {ECO:0000256|HAMAP-Rule:MF_00510}; Peptidase E; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Peptidase E n=1089 Tax=Enterobacteriaceae RepID=PEPE_ECO24
L3_122_031G1_scaffold_677_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16379..17251
DNA (873bp) protein (291aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444126 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C1.;"
Ribosomal large subunit pseudouridine synthase F n=124 Tax=Escherichia RepID=RLUF_ECOLI
pseudouridine synthase
L3_122_031G1_scaffold_677_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17384..17656)
DNA (273bp) protein (91aa)
Uncharacterized protein YjbD n=197 Tax=Enterobacteriaceae RepID=YJBD_ECOLI
pagB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY10156.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_122_031G1_scaffold_677_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17909..19258)
DNA (1350bp) protein (450aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
Lysine-sensitive aspartokinase 3 n=139 Tax=Escherichia RepID=AK3_ECOLI
L3_122_031G1_scaffold_677_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19783..21432
DNA (1650bp) protein (550aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=1116067 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.3.;"
Glucose-6-phosphate isomerase n=539 Tax=Enterobacteriaceae RepID=G6PI_ECO55
L3_122_031G1_scaffold_677_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21944..22186
DNA (243bp) protein (81aa)
Uncharacterized protein YjbE n=1213 Tax=Enterobacteriaceae RepID=YJBE_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA95144.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_031G1_scaffold_677_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22300..22938
DNA (639bp) protein (213aa)
Lipoprotein n=43 Tax=Escherichia coli RepID=L2ZQK9_ECOLX
putative lipoprotein
Lipoprotein {ECO:0000313|EMBL:EOU54917.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE14.;"
L3_122_031G1_scaffold_677_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22935..23672
DNA (738bp) protein (246aa)
Uncharacterized protein YjbG n=85 Tax=Escherichia RepID=YJBG_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK17369.1}; TaxID=749538 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 116-1.;"
L3_122_031G1_scaffold_677_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23672..25768
DNA (2097bp) protein (699aa)
Predicted porin n=44 Tax=Escherichia coli RepID=C6EDZ5_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT30993.1}; Flags: Precursor;; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_677_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26363..26773
DNA (411bp) protein (137aa)
Protein PsiE n=1003 Tax=Enterobacteriaceae RepID=PSIE_ECO24
psiF; Phosphate starvation inducible protein
Protein PsiE {ECO:0000256|HAMAP-Rule:MF_01048}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L3_122_031G1_scaffold_677_20
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26817..28202)
DNA (1386bp) protein (462aa)
D-xylose-proton symporter n=1 Tax=Escherichia coli KOEGE 3 (4a) RepID=U0AHI5_ECOLX
D-xylose proton-symporter XylE {ECO:0000313|EMBL:CDK71018.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
xylE; D-xylose proton-symporter XylE
L3_122_031G1_scaffold_677_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28574..29464)
DNA (891bp) protein (297aa)
Maltose transport system permease protein MalG n=1267 Tax=Enterobacteriaceae RepID=MALG_ECO57
malG; Maltose/maltodextrin ABC transporter permease MalG
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEN85151.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_122_031G1_scaffold_677_22
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29479..31023)
DNA (1545bp) protein (515aa)
Maltose transport system permease protein MalF n=439 Tax=Enterobacteriaceae RepID=MALF_ECOLI
MalF protein {ECO:0000313|EMBL:CEP57404.1}; TaxID=42897 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 2a.;"
Maltose transport system permease protein malF
L3_122_031G1_scaffold_677_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31177..32367)
DNA (1191bp) protein (397aa)
Maltose-binding periplasmic protein n=798 Tax=Enterobacteriaceae RepID=MALE_ECO57
malE; maltose ABC transporter periplasmic protein
Maltose-binding periplasmic protein {ECO:0000313|EMBL:ENA41534.1}; TaxID=1125641 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.2.;"
L3_122_031G1_scaffold_677_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32460..32555)
DNA (96bp) protein (32aa)
Uncharacterized protein n=58 Tax=Escherichia RepID=C6EDY8_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW30438.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L3_122_031G1_scaffold_677_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32732..33847
DNA (1116bp) protein (372aa)
Maltose/maltodextrin import ATP-binding protein MalK {ECO:0000256|HAMAP-Rule:MF_01709}; EC=3.6.3.19 {ECO:0000256|HAMAP-Rule:MF_01709};; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
Maltose/maltodextrin transport ATP-binding protein MalK n=15 Tax=Enterobacteriaceae RepID=A1AIL3_ECOK1
ABC transporter
L3_122_031G1_scaffold_677_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33919..35259
DNA (1341bp) protein (447aa)
Maltoporin n=100 Tax=Enterobacteriaceae RepID=LAMB_ECOBW
lamB; maltoporin
Maltoporin {ECO:0000256|HAMAP-Rule:MF_01301}; Maltose-inducible porin {ECO:0000256|HAMAP-Rule:MF_01301}; Flags: Precursor;; TaxID=1444235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-316-03_S4_C2.;"
L3_122_031G1_scaffold_677_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35502..36422
DNA (921bp) protein (307aa)
Maltose operon periplasmic protein n=103 Tax=Enterobacteriaceae RepID=MALM_ECOLI
maltose regulon periplasmic protein
Maltose operon periplasmic protein (MalM) {ECO:0000313|EMBL:EFJ65514.1}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
L3_122_031G1_scaffold_677_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36397..36549)
DNA (153bp) protein (51aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=458 Tax=Escherichia RepID=J7QJD9_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX21546.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_122_031G1_scaffold_677_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36651..36845
DNA (195bp) protein (65aa)
Uncharacterized protein n=133 Tax=Escherichia RepID=C6EDY3_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK20929.1}; TaxID=1280998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 50 (4-2593475).;"
L3_122_031G1_scaffold_677_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36903..37634
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE51 RepID=L3L993_ECOLX
hypothetical protein
Pentapeptide repeats family protein {ECO:0000313|EMBL:KEO05494.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
Displaying items 1-30 of 31 in total

View Taxonomy