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L3_122_031G1_scaffold_714

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_714_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(411..803)
DNA (393bp) protein (131aa)
Uncharacterized protein n=42 Tax=Escherichia RepID=D8ALY0_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE05324.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
hypothetical protein
L3_122_031G1_scaffold_714_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(781..1692)
DNA (912bp) protein (304aa)
Protein rhsD n=1 Tax=Escherichia coli KTE61 RepID=S1CRP8_ECOLX
core protein RhsG
Core protein {ECO:0000313|EMBL:AAC32478.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_714_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1756..2568
DNA (813bp) protein (271aa)
RHS repeat-associated core domain protein n=1 Tax=Shigella sonnei 3226-85 RepID=I6EVX6_SHISO
Uncharacterized protein {ECO:0000313|EMBL:KDX17518.1}; Flags: Fragment;; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
hypothetical protein
L3_122_031G1_scaffold_714_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2603..2827
DNA (225bp) protein (75aa)
Uncharacterized protein n=593 Tax=Enterobacteriaceae RepID=A7ZHX0_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDV39498.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L3_122_031G1_scaffold_714_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2878..4353
DNA (1476bp) protein (492aa)
Type VI secretion protein, EvpB/VC_A0108 family n=42 Tax=Escherichia coli RepID=D8APR8_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO16639.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
L3_122_031G1_scaffold_714_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4360..4773
DNA (414bp) protein (138aa)
Uncharacterized protein n=211 Tax=Escherichia coli RepID=A7ZHW8_ECO24
hypothetical protein
Type VI secretion system lysozyme-related protein {ECO:0000313|EMBL:EFJ86055.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_122_031G1_scaffold_714_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4777..6627
DNA (1851bp) protein (617aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=B2NBA8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENH05394.1}; TaxID=1116069 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.5.;"
type VI secretion protein
L3_122_031G1_scaffold_714_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6591..7673
DNA (1083bp) protein (361aa)
Uncharacterized protein n=262 Tax=Escherichia coli RepID=B7LHD4_ECO55
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHX36714.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_122_031G1_scaffold_714_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7698..8978
DNA (1281bp) protein (427aa)
Uncharacterized protein n=89 Tax=Escherichia coli RepID=B7M226_ECO8A
hypothetical protein
Type VI secretion system FHA domain protein {ECO:0000313|EMBL:EFU33512.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_122_031G1_scaffold_714_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8975..9499
DNA (525bp) protein (175aa)
Type VI secretion lipoprotein, VC_A0113 family n=350 Tax=Escherichia coli RepID=A7ZWG9_ECOHS
lipoprotein
Type VI secretion lipofamily protein {ECO:0000313|EMBL:END97097.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_122_031G1_scaffold_714_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9502..10833
DNA (1332bp) protein (444aa)
Uncharacterized protein n=34 Tax=Escherichia coli RepID=M8ZHU3_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ENB16423.1}; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
hypothetical protein
L3_122_031G1_scaffold_714_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10838..11140
DNA (303bp) protein (101aa)
Putative membrane protein Aec26 n=1 Tax=Escherichia coli O32:H37 str. P4 RepID=I2I551_ECOLX
hypothetical protein
DotU family type IV/VI secretion system protein {ECO:0000313|EMBL:ELE05311.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_122_031G1_scaffold_714_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11302..14019
DNA (2718bp) protein (906aa)
Intracellular multiplication and macrophage-killing family protein n=2 Tax=Escherichia coli RepID=N1SPD4_ECOLX
Type VI secretion protein IcmF {ECO:0000313|EMBL:EOU70896.1}; TaxID=1169333 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE14.;"
type VI secretion protein IcmFhypothetical protein
L3_122_031G1_scaffold_714_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14030..15382
DNA (1353bp) protein (451aa)
Uncharacterized protein n=169 Tax=Escherichia coli RepID=B7LHC5_ECO55
hypothetical protein
ImpA family protein {ECO:0000313|EMBL:EFU97500.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
L3_122_031G1_scaffold_714_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15406..15888
DNA (483bp) protein (161aa)
Uncharacterized protein n=471 Tax=Enterobacteriaceae RepID=J7Q656_ECOLX
hypothetical protein
Type VI secretion system effector, Hcp1 family protein {ECO:0000313|EMBL:EHW26012.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_122_031G1_scaffold_714_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15932..16846
DNA (915bp) protein (305aa)
Uncharacterized protein n=141 Tax=Escherichia coli RepID=C8THN9_ECO26
membrane protein
Inner membrane protein yafU {ECO:0000313|EMBL:EHW26011.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_122_031G1_scaffold_714_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16856..17335
DNA (480bp) protein (160aa)
Uncharacterized protein YkfM n=56 Tax=Escherichia RepID=YKFM_ECOLI
hypothetical protein
Lethality reduction protein, putative inner membrane protein {ECO:0000313|EMBL:AKF54174.1}; Uncharacterized protein {ECO:0000313|EMBL:AJB50355.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_714_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17472..18257)
DNA (786bp) protein (262aa)
Predicted aminopeptidase n=8 Tax=Escherichia coli RepID=C6EA74_ECOBD
yafT; putative aminopeptidase
Putative aminopeptidase {ECO:0000313|EMBL:ACT30408.1}; Flags: Precursor;; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_714_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18796..19536)
DNA (741bp) protein (247aa)
DNA polymerase III subunit epsilon (EC:2.7.7.7)
DNA polymerase III subunit epsilon n=1 Tax=Escherichia coli RepID=UPI0002B913D5
DNA polymerase III subunit epsilon {ECO:0000313|EMBL:EOW28476.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L3_122_031G1_scaffold_714_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19592..20059
DNA (468bp) protein (156aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
Ribonuclease H n=12 Tax=Escherichia coli RepID=D8A3N0_ECOLX
ribonuclease HI RnhA
L3_122_031G1_scaffold_714_21
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20056..20778)
DNA (723bp) protein (241aa)
Uncharacterized protein n=132 Tax=Enterobacteriaceae RepID=Q3Z5F0_SHISS
yafS; S-adenosyl-L-methionine-dependent methyltransferase
Uncharacterized protein {ECO:0000313|EMBL:EFW48882.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L3_122_031G1_scaffold_714_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20812..21567
DNA (756bp) protein (252aa)
gloB; hydroxyacylglutathione hydrolase (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase {ECO:0000255|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000255|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000255|HAMAP-Rule:MF_01374}; Short=Glx II {ECO:0000255|HAMAP-Rule:MF_01374};; TaxID=481805 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks).;"
Hydroxyacylglutathione hydrolase n=38 Tax=Escherichia coli RepID=GLO2_ECOLC
L3_122_031G1_scaffold_714_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21777..22997
DNA (1221bp) protein (407aa)
membrane-bound lytic murein transglycosylase D n=1 Tax=Escherichia coli RepID=UPI0002BB6A2B
mltD; membrane-bound lytic murein transglycosylase D
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EFK48645.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_122_031G1_scaffold_714_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23045..23668)
DNA (624bp) protein (208aa)
Methyltransferase, UbiE/COQ5 family n=36 Tax=Escherichia coli RepID=B3XF18_ECOLX
Putative S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:AJF54981.1}; TaxID=745156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1303.;"
yafE; S-adenosyl-L-methionine-dependent methyltransferase
L3_122_031G1_scaffold_714_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23672..24451)
DNA (780bp) protein (260aa)
UPF0294 protein YafD n=2 Tax=Escherichia coli RepID=E9Z253_ECOLX
yafD; hypothetical protein
UPF0294 protein YafD {ECO:0000256|HAMAP-Rule:MF_01119}; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
L3_122_031G1_scaffold_714_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24713..25627
DNA (915bp) protein (305aa)
Transcriptional regulator, LysR family n=59 Tax=Enterobacteriaceae RepID=B1IPV0_ECOLC
yafC; DNA-binding transcriptional regulator
Transcriptional regulator LYSR {ECO:0000313|EMBL:EOV68372.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
L3_122_031G1_scaffold_714_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25624..26427)
DNA (804bp) protein (268aa)
dkgB; 2,5-diketo-D-gluconate reductase B (EC:1.1.1.91 1.1.1.274)
2,5-diketo-D-gluconate reductase B n=30 Tax=Escherichia coli RepID=C6EA83_ECOBD
Aldo/keto reductase {ECO:0000313|EMBL:ACT30417.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_714_28

Not on your lists

comp(26403..26687)
DNA (285bp) protein (95aa)
Uncharacterized protein (Fragment) n=1 Tax=Escherichia coli O25b:H4-ST131 str. EC958 RepID=N1N6Q7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ETJ45366.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying 28 items

View Taxonomy