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L3_122_031G1_scaffold_1019

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_1019_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..220
DNA (219bp) protein (73aa)
H repeat-associated protein yhhI n=1 Tax=Escherichia sp. 1_1_43 RepID=T2N7E1_9ESCH
transposase IS4 family protein
Transposase DDE domain protein {ECO:0000313|EMBL:EMX11724.1}; Flags: Fragment;; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
L3_122_031G1_scaffold_1019_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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491..1069
DNA (579bp) protein (193aa)
Type II secretion system (T2SS), E, N-terminal domain protein n=1 Tax=Escherichia coli 2785200 RepID=M8ZK45_ECOLX
General secretory system II protein E domain-containing protein
Glycosyl transferase group 2 family protein {ECO:0000313|EMBL:END95924.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_122_031G1_scaffold_1019_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1115..2728
DNA (1614bp) protein (538aa)
General secretory system II protein E domain protein n=25 Tax=Escherichia coli RepID=B1IZ62_ECOLC
nfrB; bacteriophage N4 adsorption protein B
General secretory system II, protein E protein {ECO:0000313|EMBL:ESA98218.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L3_122_031G1_scaffold_1019_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2715..5687
DNA (2973bp) protein (991aa)
Bacteriophage N4 adsorption protein A n=30 Tax=Escherichia coli RepID=B2N8Q6_ECOLX
bacteriophage N4 adsorption protein A
Bacteriophage N4 adsorption protein A {ECO:0000313|EMBL:EDU64162.1}; TaxID=344610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 53638.;"
L3_122_031G1_scaffold_1019_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5688..6578
DNA (891bp) protein (297aa)
Uncharacterized protein n=40 Tax=Escherichia coli RepID=B2N8Q7_ECOLX
hypothetical protein
Putative n5-glutamine methyltransferase {ECO:0000313|EMBL:EMX21832.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L3_122_031G1_scaffold_1019_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6761..7522
DNA (762bp) protein (254aa)
DNA-binding transcriptional activator of porin biosynthesis n=55 Tax=Escherichia coli RepID=C6UCF8_ECOBR
envY; DNA-binding transcriptional activator of porin biosynthesis
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ESA98215.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L3_122_031G1_scaffold_1019_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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8036..8989
DNA (954bp) protein (318aa)
DLP12 prophage, outer membrane protease VII, outer membrane protein 3b {ECO:0000313|EMBL:AKF54487.1}; Protease 7 {ECO:0000313|EMBL:CEE08259.1}; EC=3.4.23.49 {ECO:0000313|EMBL:CEE08259.1};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Protease 7 n=27 Tax=Escherichia coli RepID=OMPT_ECOLI
ompT; outer membrane protease
L3_122_031G1_scaffold_1019_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9238..9987)
DNA (750bp) protein (250aa)
HTH-type transcriptional regulator AppY n=110 Tax=Escherichia coli RepID=APPY_ECOLI
appY; DNA-binding transcriptional activator
HTH-type transcriptional regulator AppY {ECO:0000313|EMBL:KEO24007.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
L3_122_031G1_scaffold_1019_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10663..10956)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Escherichia coli IS1 RepID=V6E6W7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQV92984.1}; TaxID=1281168 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KOEGE 71 (186a).;"
L3_122_031G1_scaffold_1019_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10967..11671)
DNA (705bp) protein (235aa)
Chaperone of endosialidase family protein n=6 Tax=Escherichia coli RepID=M8QHR0_ECOLX
hypothetical protein
Chaperone of endosialidase family protein {ECO:0000313|EMBL:ENB22994.1}; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE030_MS-09.;"
L3_122_031G1_scaffold_1019_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11681..11962)
DNA (282bp) protein (94aa)
Uncharacterized protein n=13 Tax=Escherichia coli RepID=M8QXN7_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENA25332.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L3_122_031G1_scaffold_1019_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11959..14304)
DNA (2346bp) protein (782aa)
Prophage tail fiber family protein n=6 Tax=Escherichia coli RepID=N2INU9_ECOLX
hypothetical protein
Prophage tail fiber family protein {ECO:0000313|EMBL:ENA25331.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
L3_122_031G1_scaffold_1019_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14363..17185)
DNA (2823bp) protein (941aa)
Phage tail protein n=3 Tax=Escherichia coli RepID=U7C0I5_ECOLX
putative tail component of prophage
Host specificity protein J {ECO:0000313|EMBL:AIX66113.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_1019_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17139..17714)
DNA (576bp) protein (192aa)
DNA packaging Nu1 n=2 Tax=Escherichia coli RepID=C6EKD2_ECOBD
nohB; DNA packaging protein
DNA packaging Nu1 {ECO:0000313|EMBL:ACT30099.1}; TaxID=469008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain B / BL21-DE3).;"
L3_122_031G1_scaffold_1019_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18658..18951
DNA (294bp) protein (98aa)
Bacteriophage lambda Bor protein homolog n=304 Tax=Enterobacteriaceae RepID=C6EKD4_ECOBD
Bor protein
Bor protein {ECO:0000313|EMBL:EGB86871.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L3_122_031G1_scaffold_1019_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19259..19756)
DNA (498bp) protein (166aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
Lysozyme n=90 Tax=Escherichia coli RepID=A1AAX3_ECOK1
phage lysozome
L3_122_031G1_scaffold_1019_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19756..19971)
DNA (216bp) protein (72aa)
Lysis protein S homolog from lambdoid prophage DLP12 n=853 Tax=root RepID=ESSD_ECOL6
essD; phage lysis protein S; DLP12 prophage
Phage lysis protein {ECO:0000313|EMBL:ESP10587.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_122_031G1_scaffold_1019_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20560..21642
DNA (1083bp) protein (361aa)
Outer membrane porin protein nmpC n=3 Tax=Escherichia coli RepID=Q8CW50_ECOL6
nmpC; outer membrane porin
Outer membrane porin OmpD {ECO:0000313|EMBL:EQY33842.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_122_031G1_scaffold_1019_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21832..22215)
DNA (384bp) protein (128aa)
Phage antitermination Q type 1 family n=159 Tax=Escherichia coli RepID=A7ZJG9_ECO24
ybcQ; putative antitermination protein
Phage antitermination Q family protein {ECO:0000313|EMBL:EMX11899.1}; TaxID=1125634 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 174750.;"
L3_122_031G1_scaffold_1019_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22301..22438)
DNA (138bp) protein (46aa)
DLP12 prophage small protein n=57 Tax=Escherichia coli RepID=C5W0Q3_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENA08973.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
L3_122_031G1_scaffold_1019_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22438..22800)
DNA (363bp) protein (121aa)
Crossover junction endodeoxyribonuclease rusA {ECO:0000256|PIRNR:PIRNR001007}; EC=3.1.22.4 {ECO:0000256|PIRNR:PIRNR001007};; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
Crossover junction endodeoxyribonuclease rusA n=41 Tax=Escherichia coli RepID=C6EKE2_ECOBD
rus; endodeoxyribonuclease RUS
L3_122_031G1_scaffold_1019_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22797..23087)
DNA (291bp) protein (97aa)
Predicted protein n=83 Tax=Escherichia coli RepID=C6EKE3_ECOBD
ybcO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDH00569.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_122_031G1_scaffold_1019_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23080..23250)
DNA (171bp) protein (57aa)
Protein ninE n=300 Tax=root RepID=NINE_BP82
prophage protein NinE
Protein ninE {ECO:0000313|EMBL:EGW97155.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_122_031G1_scaffold_1019_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23250..23705)
DNA (456bp) protein (152aa)
Uncharacterized protein YbcN n=59 Tax=Escherichia coli RepID=YBCN_ECOLI
hypothetical protein
DLP12 prophage, uncharacterized protein {ECO:0000313|EMBL:AKF54470.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_1019_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23920..24717)
DNA (798bp) protein (266aa)
Uncharacterized HTH-type transcriptional regulator YbcM n=149 Tax=Escherichia coli RepID=YBCM_ECOLI
ybcM; DLP12 prophage DNA-binding transcriptional regulator
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:KDW82408.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_122_031G1_scaffold_1019_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24727..25278)
DNA (552bp) protein (184aa)
UPF0098 protein YbcL n=29 Tax=Escherichia coli RepID=YBCL_ECOLI
ybcL; kinase inhibitor
Inactive polymorphonuclear leukocyte migration suppressor, DLP12 prophage, UPF0098 family secreted protein {ECO:0000313|EMBL:AKF54467.1}; UPF0098 protein ybcL {ECO:0000313|EMBL:CEE10377.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_031G1_scaffold_1019_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25743..26762)
DNA (1020bp) protein (340aa)
Phage recombinase n=2 Tax=Escherichia coli RepID=T7K377_ECOLX
ybcK; recombinase
Phage recombinase {ECO:0000313|EMBL:EQN27065.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
Displaying 27 items

View Taxonomy