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L3_122_031G1_scaffold_1211

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Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_1211_1
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..118
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Escherichia coli IS5 RepID=V6ETV4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EFW58073.1}; TaxID=945360 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri CDC 796-83.;"
L3_122_031G1_scaffold_1211_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(92..310)
DNA (219bp) protein (73aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=274 Tax=Enterobacteriaceae RepID=J7R2J8_ECOLX
positive regulator of late gene transcription
Late control protein ogr {ECO:0000313|EMBL:EGW95802.1}; TaxID=754086 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli STEC_DG131-3.;"
L3_122_031G1_scaffold_1211_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(401..1501)
DNA (1101bp) protein (367aa)
Phage late control gene D family protein n=18 Tax=Escherichia RepID=E3XV62_ECOLX
Bacteriophage late control protein {ECO:0000313|EMBL:EHU32793.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
D; late control gene D protein
L3_122_031G1_scaffold_1211_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1565..1882)
DNA (318bp) protein (106aa)
tail assembly protein n=1 Tax=Salmonella choleraesuis RepID=UPI00030F2997
bacteriophage tail protein GpU
Bacteriophage tail protein GpU {ECO:0000313|EMBL:CAR09230.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_122_031G1_scaffold_1211_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1879..3501)
DNA (1623bp) protein (541aa)
Phage tail tape measure protein, TP901 family n=1 Tax=Escherichia coli 908519 RepID=V0UJ10_ECOLX
tail tape measure protein
Phage tail tape measure protein, TP901 family {ECO:0000313|EMBL:ESD33137.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
L3_122_031G1_scaffold_1211_6
Cronobacter sakazakii, Cronobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3467..4375)
DNA (909bp) protein (303aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Escherichia coli 2726800 RepID=N1TAX9_ECOLX
tail protein
Phage protein {ECO:0000313|EMBL:CCK06375.1}; TaxID=1208664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cronobacter.;" source="Cronobacter sakazakii 696.;"
L3_122_031G1_scaffold_1211_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4456..4824)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Escherichia coli RepID=UPI0002BC57B0
TP901 family phage tail tape measure protein
Phage tail tape measure protein, TP901 family, core region {ECO:0000313|EMBL:EOU71481.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_122_031G1_scaffold_1211_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4951..5253)
DNA (303bp) protein (101aa)
Tail E family protein n=68 Tax=Enterobacteriaceae RepID=B1IWT0_ECOLC
phage tail protein
Phage tail protein E {ECO:0000313|EMBL:EFK68906.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L3_122_031G1_scaffold_1211_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5308..5823)
DNA (516bp) protein (172aa)
Tail fiber component ofprophage n=205 Tax=Enterobacteriaceae RepID=E2QQ81_ECOLX
tail fiber component ofprophage
Phage major tail tube protein {ECO:0000313|EMBL:EZJ53674.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L3_122_031G1_scaffold_1211_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5833..7005)
DNA (1173bp) protein (391aa)
phage tail protein n=1 Tax=Escherichia sp. TW09231 RepID=UPI0002BA3E3D
Phage tail sheath family protein {ECO:0000313|EMBL:KEJ69992.1}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
phage tail sheath protein
L3_122_031G1_scaffold_1211_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7237..8421)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=5 Tax=Shigella flexneri RepID=Q83M72_SHIFL
Uncharacterized protein {ECO:0000313|EMBL:KGM59670.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
hypothetical protein
L3_122_031G1_scaffold_1211_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8677..9066)
DNA (390bp) protein (130aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=T6D1N3_ECOLX
putative tail fiber assembly protein (possibly partial)
Uncharacterized protein {ECO:0000313|EMBL:AEQ13803.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L3_122_031G1_scaffold_1211_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9066..10772)
DNA (1707bp) protein (569aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=V0URL2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESD33309.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
phage-related tail fiber protein-like protein
L3_122_031G1_scaffold_1211_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10769..11374)
DNA (606bp) protein (202aa)
Phage tail protein n=46 Tax=Enterobacteriaceae RepID=E2QQ86_ECOLX
phage tail protein
Phage tail protein I {ECO:0000313|EMBL:EZJ45194.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_122_031G1_scaffold_1211_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11367..12275)
DNA (909bp) protein (303aa)
Phage baseplate assembly protein n=3 Tax=Escherichia coli RepID=F4U726_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELE02704.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
baseplate assembly protein J
L3_122_031G1_scaffold_1211_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12262..12621)
DNA (360bp) protein (120aa)
Baseplate assembly protein W (GpW) n=21 Tax=Escherichia coli RepID=E0J5R2_ECOLW
Baseplate assembly protein W (GpW)
Phage baseplate assembly protein {ECO:0000313|EMBL:EGI46608.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_122_031G1_scaffold_1211_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12618..13196)
DNA (579bp) protein (193aa)
Baseplate assembly protein V n=16 Tax=Escherichia RepID=E6BAD7_ECOLX
Baseplate assembly protein V {ECO:0000313|EMBL:EFU95881.1}; TaxID=670892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3431.;"
Baseplate assembly protein GpV
L3_122_031G1_scaffold_1211_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13265..13711)
DNA (447bp) protein (149aa)
Phage virion morphogeneis protein n=2 Tax=Escherichia coli RepID=V0URK7_ECOLX
Phage virion morphogeneis protein {ECO:0000313|EMBL:ESD33304.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908519.;"
phage virion morphogenesis protein
L3_122_031G1_scaffold_1211_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13704..14135)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 147 (4-5893887) RepID=T7F6M4_ECOLX
Tail completion protein R (GpR) {ECO:0000313|EMBL:EID66204.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
tail protein
L3_122_031G1_scaffold_1211_20
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14231..14659)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 147 (4-5893887) RepID=T7FSA0_ECOLX
phage lysis timing protein LysB
Phage lysis regulatory protein, LysB family {ECO:0000313|EMBL:EMR49783.1}; TaxID=1192688 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella enterica subsp. enterica serovar Dublin str. UC16.;"
L3_122_031G1_scaffold_1211_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14656..15033)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Escherichia coli HVH 188 (4-2356988) RepID=T7QGT5_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CEK06416.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
hypothetical protein
L3_122_031G1_scaffold_1211_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15035..15547)
DNA (513bp) protein (171aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
Lysozyme n=23 Tax=Escherichia coli RepID=Q8FJH5_ECOL6
Fels-2 prophage: prophage lysozyme
L3_122_031G1_scaffold_1211_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15528..15743)
DNA (216bp) protein (72aa)
Possible secretory protein n=280 Tax=Enterobacteriaceae RepID=E2QQ94_ECOLX
nucE; secretory protein
Putative membrane protein {ECO:0000313|EMBL:EHU32770.1}; TaxID=868138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2A.;"
L3_122_031G1_scaffold_1211_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15747..15950)
DNA (204bp) protein (68aa)
Phage tail protein n=257 Tax=Enterobacteriaceae RepID=E2QQ95_ECOLX
phage tail protein
Phage Tail Protein X {ECO:0000313|EMBL:EFJ84618.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_122_031G1_scaffold_1211_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15950..16414)
DNA (465bp) protein (155aa)
Head completion/stabilization protein (GpL) n=183 Tax=Enterobacteriaceae RepID=B7MYT4_ECO81
phage head completion protein
Phage head completion protein GPL {ECO:0000313|EMBL:EIH43619.1}; TaxID=869678 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 99.0741.;"
L3_122_031G1_scaffold_1211_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16510..17160)
DNA (651bp) protein (217aa)
Phage small terminase subunit n=2 Tax=Escherichia coli RepID=N2H838_ECOLX
Phage small terminase subunit {ECO:0000313|EMBL:ENA09105.1}; TaxID=1116047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0299917.1.;"
terminase, endonuclease subunit
L3_122_031G1_scaffold_1211_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17164..18222)
DNA (1059bp) protein (353aa)
Phage major capsid protein, P2 family n=9 Tax=Escherichia coli RepID=E2WT95_ECOLX
Phage major capsid protein, P2 family {ECO:0000313|EMBL:EZJ45181.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
N; minor capsid protein H1 and H2, major capsid protein N*
L3_122_031G1_scaffold_1211_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18239..19072)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE10 RepID=L2V6B2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ELC10813.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE10.;"
capsid scaffolding
L3_122_031G1_scaffold_1211_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19215..20468
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE233 RepID=L3IE86_ECOLX
P; Terminase, ATPase subunit (GpP)
Uncharacterized protein {ECO:0000313|EMBL:EQY27014.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_122_031G1_scaffold_1211_30
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20449..20907
DNA (459bp) protein (153aa)
ATPase subunit of terminase family protein n=2 Tax=Escherichia coli RepID=M9A5Q1_ECOLX
ybl37; ybl37
ATPase subunit of terminase family protein {ECO:0000313|EMBL:EJZ67915.1}; TaxID=766155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1485-80.;"
Displaying items 1-30 of 48 in total

View Taxonomy