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L3_122_031G1_scaffold_1266

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_1266_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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50..1315
DNA (1266bp) protein (422aa)
ATP-dependent RNA helicase RhlB {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011806}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00661, ECO:0000256|SAAS:SAAS00011808};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
ATP-dependent RNA helicase RhlB n=946 Tax=Enterobacteriaceae RepID=RHLB_ECO24
DEAD/DEAH box helicase
L3_122_031G1_scaffold_1266_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1449..2933
DNA (1485bp) protein (495aa)
gpp; guanosine pentaphosphate phosphohydrolase (EC:3.6.1.40 3.6.1.11)
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181013}; EC=3.6.1.40 {ECO:0000256|HAMAP-Rule:MF_01550, ECO:0000256|SAAS:SAAS00181014};; Guanosine pentaphosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; pppGpp-5'-phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_01550}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase n=279 Tax=Enterobacteriaceae RepID=GPPA_ECO24
L3_122_031G1_scaffold_1266_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2980..5001)
DNA (2022bp) protein (674aa)
rep; DNA helicase and single-stranded DNA-dependent ATPase (EC:3.6.1.-)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
ATP-dependent DNA helicase Rep n=152 Tax=Enterobacteriaceae RepID=A7ZTX9_ECO24
L3_122_031G1_scaffold_1266_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5218..5436
DNA (219bp) protein (73aa)
YifN n=75 Tax=Escherichia coli RepID=C5WB14_ECOBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOW17329.1}; TaxID=1182703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE107.;"
L3_122_031G1_scaffold_1266_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5865..6146
DNA (282bp) protein (94aa)
ppiC; peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00015172}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00015172};; TaxID=1116036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2875150.;"
Peptidyl-prolyl cis-trans isomerase C n=1296 Tax=Enterobacteriaceae RepID=PPIC_ECO57
L3_122_031G1_scaffold_1266_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6233..7708)
DNA (1476bp) protein (492aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
Ketol-acid reductoisomerase n=6 Tax=Escherichia coli RepID=K3L8E1_ECOLX
ilvC; ketol-acid reductoisomerase
L3_122_031G1_scaffold_1266_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7858..8751
DNA (894bp) protein (298aa)
HTH-type transcriptional regulator IlvY n=9 Tax=Escherichia coli RepID=F4M9L0_ECOLX
HTH-type transcriptional regulator IlvY
HTH-type transcriptional regulator IlvY {ECO:0000313|EMBL:AEE59088.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_122_031G1_scaffold_1266_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8803..10347)
DNA (1545bp) protein (515aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
Threonine ammonia-lyase, biosynthetic IlvA n=8 Tax=Escherichia coli RepID=F4M9K9_ECOLX
ilvA; threonine ammonia-lyase, biosynthetic IlvA
L3_122_031G1_scaffold_1266_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10350..12200)
DNA (1851bp) protein (617aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
Dihydroxy-acid dehydratase n=9 Tax=Escherichia coli RepID=F4M9K8_ECOLX
ilvD; dihydroxy-acid dehydratase IlvD
L3_122_031G1_scaffold_1266_10
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12265..13194)
DNA (930bp) protein (310aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EIQ24508.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EIQ24508.1};; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
Branched-chain-amino-acid aminotransferase n=1184 Tax=Enterobacteriaceae RepID=ILVE_ECO57
ilvE; branched-chain amino-acid aminotransferase
L3_122_031G1_scaffold_1266_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13214..13477)
DNA (264bp) protein (88aa)
Acetolactate synthase isozyme 2 small subunit {ECO:0000313|EMBL:EMX82252.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EMX82252.1};; TaxID=1116119 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2719100.;"
Acetolactate synthase isozyme 2 small subunit n=1421 Tax=Enterobacteriaceae RepID=ILVM_ECOL6
acetolactate synthase isozyme, small subunit
L3_122_031G1_scaffold_1266_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13474..15120)
DNA (1647bp) protein (549aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
ilvG; acetolactate synthase 2 catalytic subunit (EC:2.2.1.6)
Acetolactate synthase n=21 Tax=Escherichia coli RepID=D7YBW3_ECOLX
L3_122_031G1_scaffold_1266_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15602..17122
DNA (1521bp) protein (507aa)
Sigma-54 interaction domain protein n=25 Tax=Escherichia coli RepID=M8WD99_ECOLX
ATP-dependent protease {ECO:0000313|EMBL:KDV37374.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
putative ATP-dependent protease
L3_122_031G1_scaffold_1266_14
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17147..17485)
DNA (339bp) protein (113aa)
UPF0438 protein YifE n=1447 Tax=Bacteria RepID=YIFE_ECO57
hypothetical protein
Protein yifE {ECO:0000313|EMBL:EFW51078.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella dysenteriae CDC 74-1112.;"
L3_122_031G1_scaffold_1266_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17604..18443
DNA (840bp) protein (280aa)
HTH-type transcriptional regulator HdfR n=523 Tax=Enterobacteriaceae RepID=HDFR_ECO24
yifA; HTH-type transcriptional regulator hdfR
HTH-type transcriptional regulator HdfR {ECO:0000256|HAMAP-Rule:MF_01233}; H-NS-dependent flhDC regulator {ECO:0000256|HAMAP-Rule:MF_01233}; TaxID=1446741 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O45:H2 str. 2009C-3686.;"
Displaying 15 items

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