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L3_122_031G1_scaffold_395

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Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_395_1
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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1..321
DNA (321bp) protein (107aa)
pyridoxal phosphate synthase yaaE subunit (EC:2.6.-.-)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
Glutamine amidotransferase subunit PdxT n=2 Tax=Megamonas RepID=D4KGX2_9FIRM
L3_122_031G1_scaffold_395_2
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(381..1610)
DNA (1230bp) protein (410aa)
type I restriction-modification system n=1 Tax=Megamonas rupellensis RepID=UPI00035FAF5B
Predicted ATPase (AAA+ superfamily)
Predicted ATPase (AAA+ superfamily) {ECO:0000313|EMBL:CBL05502.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_031G1_scaffold_395_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1818..3332)
DNA (1515bp) protein (505aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34962.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Phosphomannomutase
L3_122_031G1_scaffold_395_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(3373..5142)
DNA (1770bp) protein (590aa)
ATP-dependent DNA helicase, RecQ-like (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9L7_9FIRM
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EHR34963.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_395_5
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5129..6001)
DNA (873bp) protein (291aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6M546_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93545.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
2-hydroxy-3-oxopropionate reductase
L3_122_031G1_scaffold_395_6
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6034..6489)
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34965.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
membrane protein
L3_122_031G1_scaffold_395_7
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6510..6971)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34966.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
CBS-domain-containing membrane protein
L3_122_031G1_scaffold_395_8
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7150..7758
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34967.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
regulatory protein TetR
L3_122_031G1_scaffold_395_9
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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7918..9135
DNA (1218bp) protein (406aa)
Na+/H+-dicarboxylate symporters n=2 Tax=Megamonas RepID=D4KGX9_9FIRM
Na+/H+-dicarboxylate symporters
Na+/H+-dicarboxylate symporters {ECO:0000313|EMBL:CBL05508.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_031G1_scaffold_395_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9499..10101)
DNA (603bp) protein (201aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9M3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34969.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_031G1_scaffold_395_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10204..12861)
DNA (2658bp) protein (886aa)
hypothetical protein n=1 Tax=Escherichia albertii RepID=UPI0002BA37DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEQ15342.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L3_122_031G1_scaffold_395_12
Cedecea neteri, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12888..14336)
DNA (1449bp) protein (483aa)
Cytosine/purines uracil thiamine allantoin permease n=1 Tax=Enterobacter sp. Ag1 RepID=J0MKB1_9ENTR
permease
Permease {ECO:0000313|EMBL:AIR62929.1}; TaxID=158822 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea neteri.;"
L3_122_031G1_scaffold_395_13
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14385..16298)
DNA (1914bp) protein (638aa)
Ribokinase n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BCP4_9FIRM
Ribokinase {ECO:0000313|EMBL:EGG81254.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
PfkB domain-containing protein
L3_122_031G1_scaffold_395_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16433..17350)
DNA (918bp) protein (306aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9M5_9FIRM
L3_122_031G1_scaffold_395_15
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17365..17847)
DNA (483bp) protein (161aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
putative RNA methyltransferase (EC:2.1.1.-)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=2 Tax=Megamonas RepID=H3K9M6_9FIRM
L3_122_031G1_scaffold_395_16
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17866..19935)
DNA (2070bp) protein (690aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Megamonas funiformis CAG:377 RepID=R6N6H0_9FIRM
L3_122_031G1_scaffold_395_17
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


comp(20054..20320)
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=2 Tax=Selenomonas RepID=C9LVZ5_SELS3
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
30S ribosomal protein S15
L3_122_031G1_scaffold_395_18
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20551..21267
DNA (717bp) protein (239aa)
HAD hydrolase, family IA n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9M9_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EHR34975.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_122_031G1_scaffold_395_19
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21307..22596)
DNA (1290bp) protein (430aa)
Arabinose efflux permease n=2 Tax=Megamonas RepID=D4KGY7_9FIRM
Arabinose efflux permease
Uncharacterized protein {ECO:0000313|EMBL:EHR34976.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_395_20
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(22702..23406)
DNA (705bp) protein (235aa)
Uncharacterized protein n=3 Tax=Megamonas RepID=R6M1N2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93528.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_122_031G1_scaffold_395_21
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23531..24391
DNA (861bp) protein (287aa)
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases (EC:1.1.1.31)
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases {ECO:0000313|EMBL:CBL05518.1}; EC=1.1.1.31 {ECO:0000313|EMBL:CBL05518.1};; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KGY9_9FIRM
L3_122_031G1_scaffold_395_22
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24472..25605)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB93524.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_122_031G1_scaffold_395_23
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25708..27267)
DNA (1560bp) protein (520aa)
Predicted phosphohydrolases n=2 Tax=Megamonas RepID=D4KGZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34980.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Predicted phosphohydrolases
L3_122_031G1_scaffold_395_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27457..29019)
DNA (1563bp) protein (521aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34981.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Predicted phosphohydrolases
L3_122_031G1_scaffold_395_25
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29121..30386)
DNA (1266bp) protein (422aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9N6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34982.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
S-layer homology domain.
L3_122_031G1_scaffold_395_26
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30694..31371
DNA (678bp) protein (226aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR34983.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_122_031G1_scaffold_395_27
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

31373..32662
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K9N8_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_122_031G1_scaffold_395_28
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32748..34433
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Megamonas funiformis CAG:377 RepID=R6NLH9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB98582.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
hypothetical protein
L3_122_031G1_scaffold_395_29
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(34494..35249)
DNA (756bp) protein (252aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00037E6DDE
Uncharacterized protein {ECO:0000313|EMBL:EHR34986.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_031G1_scaffold_395_30
Megamonas funiformis CAG:377, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35290..35655)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6MG23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB98588.1}; TaxID=1263086 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas; environmental samples.;" source="Megamonas funiformis CAG:377.;"
4-amino-4-deoxy-L-arabinose transferase
Displaying items 1-30 of 36 in total

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