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L3_122_031G1_scaffold_436

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_031G1_scaffold_436_1
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2..1213
DNA (1212bp) protein (404aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31892.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Lytic transglycosylase catalytic
L3_122_031G1_scaffold_436_2
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1200..1721
DNA (522bp) protein (174aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Conjugative transfer signal peptidase TraF n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB33_9FIRM
Peptidase S26, conserved region
L3_122_031G1_scaffold_436_3
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1735..2481
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31894.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
hypothetical protein
L3_122_031G1_scaffold_436_4
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2511..3029)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB35_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31895.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_5
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3040..3396)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31896.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_6
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3478..5580
DNA (2103bp) protein (701aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
DNA topoisomerase III (EC:5.99.1.2)
DNA topoisomerase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB37_9FIRM
L3_122_031G1_scaffold_436_7
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5595..6080
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31898.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_8
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6205..6378
DNA (174bp) protein (58aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31901.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_9
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6388..7140
DNA (753bp) protein (251aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Xanthomonas axonopodis Xac29-1 RepID=M4UHQ3_9XANT
filamentation induced by cAMP protein Fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:AGH79895.1}; TaxID=1304892 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonopodis Xac29-1.;"
L3_122_031G1_scaffold_436_10
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(7366..8973)
DNA (1608bp) protein (536aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB44_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31904.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_11
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8988..9197)
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31905.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_12
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9194..9523)
DNA (330bp) protein (110aa)
Single-stranded DNA-binding protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB46_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|PIRNR:PIRNR002070, ECO:0000256|RuleBase:RU000524}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
single stranded DNA-binding protein
L3_122_031G1_scaffold_436_13
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9539..9859)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31907.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9920..10453)
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31908.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
Antirestriction ArdA family protein
L3_122_031G1_scaffold_436_15
unknown

Not on your lists

comp(10910..11251)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_122_031G1_scaffold_436_16
unknown

Not on your lists

comp(11328..11684)
DNA (357bp) protein (119aa)

This feature has no annotations

L3_122_031G1_scaffold_436_17
Megamonas hypermegale, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11733..13208
DNA (1476bp) protein (492aa)
Tetratricopeptide repeat n=1 Tax=Megamonas hypermegale ART12/1 RepID=D4KHK2_9FIRM
Tetratricopeptide repeat.
Tetratricopeptide repeat {ECO:0000313|EMBL:CBL05731.1}; TaxID=657316 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas hypermegale ART12/1.;"
L3_122_031G1_scaffold_436_18
Gracilibacillus halophilus, Gracilibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13252..13791)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI0003787127
Uncharacterized protein {ECO:0000313|EMBL:ENH96622.1}; TaxID=1308866 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Gracilibacillus.;" source="Gracilibacillus halophilus YIM-C55.5.;"
L3_122_031G1_scaffold_436_19
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

comp(13874..14260)
DNA (387bp) protein (129aa)
Toxin secretion/phage lysis holin id=1859148 bin=GWD2_Clostridiales_32_59 species=unknown genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
toxin secretion/phage lysis holin
Tax=GWD2_Clostridiales_32_59_curated
L3_122_031G1_scaffold_436_20

Not on your lists

14408..14941
DNA (534bp) protein (178aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHP0_9FIRM
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:ETJ44337.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_122_031G1_scaffold_436_21
unknown

Not on your lists

comp(14999..15448)
DNA (450bp) protein (150aa)

This feature has no annotations

L3_122_031G1_scaffold_436_22
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16388..16579
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K541_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR38914.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_23
unknown

Not on your lists

comp(16696..17049)
DNA (354bp) protein (118aa)

This feature has no annotations

L3_122_031G1_scaffold_436_24
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17042..17797)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB49_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31909.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
chromosome-partitioning ATPase
L3_122_031G1_scaffold_436_25
unknown

Not on your lists

comp(17751..17930)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_122_031G1_scaffold_436_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18608..19060)
DNA (453bp) protein (151aa)
Helix-turn-helix family protein n=7 Tax=Clostridium difficile RepID=T2VWM9_CLODI
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDS86964.1}; Uncharacterized protein {ECO:0000313|EMBL:CDT81891.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
transcriptional regulator
L3_122_031G1_scaffold_436_27
unknown

Not on your lists

19229..19390
DNA (162bp) protein (54aa)

This feature has no annotations

L3_122_031G1_scaffold_436_28
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19444..19791
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3KB63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31830.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
L3_122_031G1_scaffold_436_29
Anoxybacillus sp. BCO1, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19805..20692
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Bacillus cereus BAG1O-3 RepID=S3I9Z9_BACCE
Replication initiation and membrane attachment {ECO:0000313|EMBL:KHF27801.1}; TaxID=1548750 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus sp. BCO1.;"
hypothetical protein
L3_122_031G1_scaffold_436_30
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20711..22018
DNA (1308bp) protein (436aa)
Replicative DNA helicase n=1 Tax=Megamonas funiformis YIT 11815 RepID=H3K547_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:EHR38879.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
replicative DNA helicase
Displaying items 1-30 of 49 in total

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