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L3_122_123G1_scaffold_1183

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_1183_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..1057
DNA (1056bp) protein (352aa)
ABC transporter solute-binding protein n=5 Tax=Bifidobacterium longum RepID=F8ASC0_BIFLN
ABC transporter solute-binding protein
Probable solute binding protein of ABC transporter system {ECO:0000313|EMBL:AAN24984.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_123G1_scaffold_1183_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1191..2132
DNA (942bp) protein (314aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASV1_BIFLN
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD95925.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
hisJ5; amino acid ABC transporter/signal transduction systems periplasmic protein
L3_122_123G1_scaffold_1183_3
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2263..3138
DNA (876bp) protein (292aa)
Putative ABC transporter permease component n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUE1_BIFLS
putative ABC transporter permease
Permease protein of ABC transporter system {ECO:0000313|EMBL:CCY95801.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_1183_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3177..3761
DNA (585bp) protein (195aa)
ATP binding protein of ABC transporter n=3 Tax=Bifidobacterium longum RepID=F8ASB7_BIFLN
ABC transporter ATP-binding protein
Glutamine ABC transporter, ATP-binding protein GlnQ {ECO:0000313|EMBL:EEQ54221.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_122_123G1_scaffold_1183_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3801..5639
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DTB0_BIFLD
glmS; glucosamine--fructose-6-phosphate aminotransferase
L3_122_123G1_scaffold_1183_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5683..6417
DNA (735bp) protein (245aa)
Pseudouridine synthase n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3ARZ2_BIFLN
23S rRNA pseudouridylate synthase {ECO:0000313|EMBL:KHD95929.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
rluA2; 23S RNA-specific pseudouridylate synthase
L3_122_123G1_scaffold_1183_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6459..7772)
DNA (1314bp) protein (438aa)
HipA domain-containing protein {ECO:0000313|EMBL:KFI71927.1}; EC=2.7.11.1 {ECO:0000313|EMBL:KFI71927.1};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
HipA N-terminal domain protein n=4 Tax=Bifidobacterium longum subsp. longum RepID=I3ARZ7_BIFLN
transcriptional regulator
L3_122_123G1_scaffold_1183_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7762..8001)
DNA (240bp) protein (80aa)
DNA-binding helix-turn-helix protein n=8 Tax=Bifidobacterium longum RepID=C5E8J9_BIFLI
DNA-binding protein
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEI81203.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_1183_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8167..9177)
DNA (1011bp) protein (337aa)
Regulatory protein, LacI n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZSY6_BIFLJ
Probable LacI-type transcriptional regulator {ECO:0000313|EMBL:CCY95794.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
LacI-type transcriptional regulator
L3_122_123G1_scaffold_1183_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9400..9588
DNA (189bp) protein (63aa)
Probable permease of ABC transporter system for sugars n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G550_BIFLO
ABC transporter permease
ABC transporter, permease protein {ECO:0000313|EMBL:EIJ32244.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Displaying 10 items

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