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L3_122_123G1_scaffold_1336

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_1336_1
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..236)
DNA (234bp) protein (78aa)
SerB2 n=5 Tax=Bifidobacterium RepID=E4R0X8_BIFLM
serB2; serb2
Phosphoserine phosphatase {ECO:0000313|EMBL:CCY96304.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_1336_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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275..985
DNA (711bp) protein (237aa)
Conserved hypothetical conserved transmembrane protein in the DedA family n=2 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUP4_BIFLS
hypothetical protein
SNARE-like domain protein {ECO:0000313|EMBL:EEI80547.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_1336_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1046..2254
DNA (1209bp) protein (403aa)
AAA ATPase forming ring-shaped complexes n=2 Tax=Bifidobacterium RepID=F8ATT6_BIFLN
ATPase
AAA ATPase forming ring-shaped complexes {ECO:0000256|SAAS:SAAS00017598}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_122_123G1_scaffold_1336_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2251..2478
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GUP2_BIFLS
hypothetical protein
Putative proteasome component {ECO:0000313|EMBL:ACD99417.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_1336_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2655..3581
DNA (927bp) protein (309aa)
Proteasome-associated protein n=2 Tax=Bifidobacterium RepID=F8ATT7_BIFLN
proteasome-associated protein
Proteasome-associated protein {ECO:0000313|EMBL:EFV38238.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_123G1_scaffold_1336_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3593..4489
DNA (897bp) protein (299aa)
Possible inositol monophosphatase n=15 Tax=Bifidobacterium RepID=Q8G3G4_BIFLO
inositol monophosphatase
Putative inositol monophosphatase {ECO:0000313|EMBL:BAJ71650.1}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
L3_122_123G1_scaffold_1336_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4580..4783
DNA (204bp) protein (68aa)
Prokaryotic ubiquitin-like protein Pup n=1 Tax=Bifidobacterium longum subsp. infantis CCUG 52486 RepID=C5EDN3_BIFLI
hypothetical protein
Ubiquitin-like protein Pup {ECO:0000313|EMBL:EIJ25152.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_1336_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4783..6243
DNA (1461bp) protein (487aa)
Pup--protein ligase {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320}; EC=6.3.2.n2 {ECO:0000256|HAMAP-Rule:MF_02111, ECO:0000256|SAAS:SAAS00018320};; Proteasome accessory factor A {ECO:0000256|HAMAP-Rule:MF_02111}; Pup-conjugating enzyme {ECO:0000256|HAMAP-Rule:MF_02111}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
Pup--protein ligase n=4 Tax=Bifidobacterium RepID=E4R0Y4_BIFLM
proteasome component
L3_122_123G1_scaffold_1336_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(6359..6613)
DNA (255bp) protein (85aa)
DNA-binding protein HB1 n=20 Tax=Bifidobacterium RepID=DBH1_BIFLO
DNA-binding protein
Integration host factor {ECO:0000313|EMBL:KEY21640.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying 9 items

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