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L3_122_123G1_scaffold_16

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_16_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..83)
DNA (81bp) protein (27aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D25 RepID=K5ZZC6_9PORP
PhoH-like protein
PhoH family protein {ECO:0000313|EMBL:CDD15119.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_122_123G1_scaffold_16_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

251..862
DNA (612bp) protein (204aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LA25_PARD8
hypothetical protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_122_123G1_scaffold_16_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(939..3305)
DNA (2367bp) protein (789aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6LA24_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42538.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_123G1_scaffold_16_4
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3654..4640
DNA (987bp) protein (329aa)
Choloylglycine hydrolase n=5 Tax=Bacteroidales RepID=A6LA23_PARD8
choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:CDB49799.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_122_123G1_scaffold_16_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4740..5621
DNA (882bp) protein (294aa)
AraC family transcriptional regulator n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ29_9BACE
AraC family transcriptional regulator {ECO:0000313|EMBL:EFI09517.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
transcriptional regulator
L3_122_123G1_scaffold_16_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5717..8098
DNA (2382bp) protein (794aa)
Hybrid sensory kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ28_9BACE
Hybrid sensory kinase {ECO:0000313|EMBL:EFI09516.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component hybrid sensor kinase/response regulator
L3_122_123G1_scaffold_16_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8182..9702
DNA (1521bp) protein (507aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Bacteroidales RepID=C7X759_9PORP
two-component system sensor histidine kinase
L3_122_123G1_scaffold_16_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9727..10410
DNA (684bp) protein (228aa)
DNA-binding response regulator RprY n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ26_9BACE
DNA-binding response regulator RprY {ECO:0000313|EMBL:EFI09514.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
two-component system response regulator
L3_122_123G1_scaffold_16_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10400..10657)
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X757_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN32681.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_122_123G1_scaffold_16_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10741..12057
DNA (1317bp) protein (439aa)
Tetrahydrofolate synthase n=3 Tax=Bacteroidales RepID=D7IQ24_9BACE
FolC protein {ECO:0000313|EMBL:EKN32682.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
folylpolyglutamate synthase
L3_122_123G1_scaffold_16_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12081..13496
DNA (1416bp) protein (472aa)
Transporter, major facilitator family protein n=7 Tax=Bacteroidales RepID=C7X755_9PORP
oxalate:formate antiporter
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09511.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_16_12
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13645..14049)
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ22_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09510.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_16_13
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14322..14714
DNA (393bp) protein (131aa)
Toxin-antitoxin system, antitoxin component, Xre family n=2 Tax=Bacteroidales RepID=D7IQ21_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN32345.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
transcriptional regulator
L3_122_123G1_scaffold_16_14
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15352..16167
DNA (816bp) protein (272aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Bacteroidales RepID=ISPE_PARD8
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_122_123G1_scaffold_16_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16164..16745
DNA (582bp) protein (194aa)
Methyltransferase domain protein n=6 Tax=Bacteroidales RepID=C7X751_9PORP
methyltransferase
Methyltransferase domain protein {ECO:0000313|EMBL:KDS68470.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_123G1_scaffold_16_16
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16757..19249
DNA (2493bp) protein (831aa)
Alanyl dipeptidyl peptidase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ18_9BACE
Alanyl dipeptidyl peptidase {ECO:0000313|EMBL:EFI09506.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
alanyl dipeptidyl peptidase
L3_122_123G1_scaffold_16_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19448..20602
DNA (1155bp) protein (385aa)
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ17_9BACE
Alkylhydroperoxidase AhpD family core domain-containing protein {ECO:0000313|EMBL:EFI09505.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
carboxymuconolactone decarboxylase
L3_122_123G1_scaffold_16_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20687..21688)
DNA (1002bp) protein (334aa)
Malate dehydrogenase n=6 Tax=Bacteroidales RepID=A6L9W7_PARD8
malate dehydrogenase
Malate dehydrogenase {ECO:0000313|EMBL:EFI09504.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_16_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21843..23693
DNA (1851bp) protein (617aa)
UPF0313 protein HMPREF0104_01515 n=2 Tax=Bacteroidales RepID=D7IQ15_9BACE
UPF0313 protein HMPREF0104_01515 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_16_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23820..24200)
DNA (381bp) protein (127aa)
Endoribonuclease L-PSP n=8 Tax=Bacteroidales RepID=D7IQ14_9BACE
translation initiation inhibitor endoribonuclease L-PSP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EFK62845.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_122_123G1_scaffold_16_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24228..24974)
DNA (747bp) protein (249aa)
RNA methyltransferase, TrmH family, group 3 n=4 Tax=Bacteroidales RepID=C7X745_9PORP
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EEU51903.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
tRNA/rRNA methyltransferase
L3_122_123G1_scaffold_16_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25024..25614)
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Thymidine kinase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ12_9BACE
thymidine kinase
L3_122_123G1_scaffold_16_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25987..26502
DNA (516bp) protein (172aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGY6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS68474.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
multidrug efflux system protein
L3_122_123G1_scaffold_16_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26499..27026
DNA (528bp) protein (176aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AGY6_9PORP
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:KDS68474.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
multidrug efflux system protein
L3_122_123G1_scaffold_16_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27032..30073
DNA (3042bp) protein (1014aa)
Transporter, AcrB/D/F family n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ11_9BACE
Transporter, AcrB/D/F family {ECO:0000313|EMBL:EFI09499.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
AcrB/AcrD/AcrF family transporter
L3_122_123G1_scaffold_16_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30083..31393
DNA (1311bp) protein (437aa)
Outer membrane protein n=4 Tax=Bacteroidales RepID=A6L9W0_PARD8
outer membrane protein
Outer membrane protein {ECO:0000313|EMBL:EFI09498.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_16_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31397..32437
DNA (1041bp) protein (347aa)
Histidine kinase n=6 Tax=Bacteroidales RepID=C7X740_9PORP
two-component system sensor histidine kinase
Putative two-component system sensor histidine kinase {ECO:0000313|EMBL:ABR42473.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_123G1_scaffold_16_28
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32430..32951
DNA (522bp) protein (174aa)
Two-component system response regulator n=4 Tax=Bacteroidales RepID=A6L9V8_PARD8
two-component system response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:EEU51897.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_123G1_scaffold_16_29
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33020..33208
DNA (189bp) protein (63aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BA01_9PORP
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EFK62852.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
two-component system response regulator
L3_122_123G1_scaffold_16_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33205..33837)
DNA (633bp) protein (211aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6L9V7_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR42471.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Displaying items 1-30 of 168 in total

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