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L3_122_123G1_scaffold_19

Search features with annotation key words

Displaying items 1-30 of 198 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_19_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..370
DNA (369bp) protein (123aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=T3XQQ8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EDM99556.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_122_123G1_scaffold_19_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

463..2163
DNA (1701bp) protein (567aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWM1_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM99558.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative site-specific recombinase
L3_122_123G1_scaffold_19_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2178..2552
DNA (375bp) protein (125aa)
Resolvase, N-terminal domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWM2_9FIRM
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EDM99559.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
resolvase domain-containing protein
L3_122_123G1_scaffold_19_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2565..4046)
DNA (1482bp) protein (494aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BJ58_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI71858.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Resolvase domain-containing protein
L3_122_123G1_scaffold_19_5
Sutterella sp. CAG:521, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4059..4427)
DNA (369bp) protein (123aa)
DNA-binding helix-turn-helix protein n=1 Tax=Sutterella sp. CAG:521 RepID=R7KHN3_9BURK
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDE75870.1}; TaxID=1262977 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella; environmental samples.;" source="Sutterella sp. CAG:521.;"
toxin-antitoxin system
L3_122_123G1_scaffold_19_6
unknown

Not on your lists

comp(4753..5175)
DNA (423bp) protein (141aa)

This feature has no annotations

L3_122_123G1_scaffold_19_7
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5153..6106)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2RT78_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH86505.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
cobyrinic acid a,c-diamide synthase
L3_122_123G1_scaffold_19_8
unknown

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comp(6252..7439)
DNA (1188bp) protein (396aa)

This feature has no annotations

L3_122_123G1_scaffold_19_9
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7551..10175)
DNA (2625bp) protein (875aa)
Probable type III restriction enzyme n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UEZ8_9FIRM
putative type III restriction enzyme
Probable type III restriction enzyme {ECO:0000313|EMBL:CDC69377.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_122_123G1_scaffold_19_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10190..11785)
DNA (1596bp) protein (532aa)
Adenine specific DNA methylase Mod n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXP7_9FIRM
Adenine specific DNA methylase Mod
Adenine specific DNA methylase Mod {ECO:0000313|EMBL:CBK98796.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_122_123G1_scaffold_19_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11772..12320)
DNA (549bp) protein (183aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JXP8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98797.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_122_123G1_scaffold_19_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12345..12554)
DNA (210bp) protein (70aa)
Predicted transcriptional regulator n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKY9_CLOSC
Predicted transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:CBK78363.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_122_123G1_scaffold_19_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13144..13806)
DNA (663bp) protein (221aa)
Sigma-70 region 2 n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D5U7_CLOSY
Sigma-70 region 2 {ECO:0000313|EMBL:ERI74916.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
RNA polymerase sigma factor, sigma-70 family
L3_122_123G1_scaffold_19_14
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13787..14626)
DNA (840bp) protein (280aa)
Predicted transcriptional regulators n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKZ1_CLOSC
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK78365.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_122_123G1_scaffold_19_15
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14856..16235
DNA (1380bp) protein (460aa)
Phage/plasmid primase n=2 Tax=Roseburia RepID=G2SZV0_ROSHA
phage/plasmid primase
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EEG92887.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_122_123G1_scaffold_19_16
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

16315..17298
DNA (984bp) protein (328aa)
Plasmid recombination enzyme n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LWQ9_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CDB86571.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Plasmid recombination enzyme.
L3_122_123G1_scaffold_19_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

17285..17464
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45690.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_122_123G1_scaffold_19_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18163..18798
DNA (636bp) protein (212aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
trmB; tRNA (guanine-N(7)-)-methyltransferase (EC:2.1.1.33)
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSN2_9FIRM
L3_122_123G1_scaffold_19_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18849..19604)
DNA (756bp) protein (252aa)
Channel protein, hemolysin III family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSN3_9FIRM
Channel protein, hemolysin III family {ECO:0000313|EMBL:EHM45208.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hemolysin III family channel protein
L3_122_123G1_scaffold_19_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19821..20480
DNA (660bp) protein (220aa)
Putative KDP operon transcriptional regulatory protein KdpE n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53729.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
yycF3; Transcriptional regulatory protein yycF
L3_122_123G1_scaffold_19_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20477..21379
DNA (903bp) protein (301aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSN5_9FIRM
L3_122_123G1_scaffold_19_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21491..22159
DNA (669bp) protein (223aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridiales RepID=G9YSN6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM45211.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_122_123G1_scaffold_19_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22172..24838
DNA (2667bp) protein (889aa)
Efflux ABC transporter, permease protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSN7_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHM45212.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_122_123G1_scaffold_19_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25005..25670)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKS0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO24265.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
rubrerythrin family protein
L3_122_123G1_scaffold_19_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25825..26697)
DNA (873bp) protein (291aa)
ketose-bisphosphate aldolases (EC:4.1.2.13 4.1.2.40)
Ketose-bisphosphate aldolase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKR9_9FIRM
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EHO24264.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_122_123G1_scaffold_19_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26750..28006)
DNA (1257bp) protein (419aa)
Tagatose-6-phosphate kinase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSP0_9FIRM
Tagatose-6-phosphate kinase {ECO:0000313|EMBL:EHM45215.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
D-tagatose-bisphosphate aldolase class II accessory protein AgaZ
L3_122_123G1_scaffold_19_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28171..29562)
DNA (1392bp) protein (464aa)
Glycoside/pentoside/hexuronide transporter n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DI10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF53736.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glycoside/pentoside/hexuronide transporter
L3_122_123G1_scaffold_19_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29650..31032)
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53737.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
alpha-galactosidase
L3_122_123G1_scaffold_19_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31067..34303)
DNA (3237bp) protein (1079aa)
Alpha-galactosidase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSP3_9FIRM
Alpha-galactosidase {ECO:0000313|EMBL:EHM45218.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
glycoside hydrolase
L3_122_123G1_scaffold_19_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34361..36679)
DNA (2319bp) protein (773aa)
F5/8 type C domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YSP4_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EHM45219.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
Displaying items 1-30 of 198 in total

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