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L3_122_123G1_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 105 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_93_1
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19..1119)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A7AFC5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EET14968.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_122_123G1_scaffold_93_2
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1125..1778)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Parabacteroides goldsteinii dnLKV18 RepID=S0GN70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS20219.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
putative type I restriction enzyme
L3_122_123G1_scaffold_93_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1778..2770)
DNA (993bp) protein (331aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroidales RepID=A7AFC8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKA80451.1}; TaxID=1073388 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 616.;"
site-specific recombinase, phage integrase family
L3_122_123G1_scaffold_93_4
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2815..4356)
DNA (1542bp) protein (514aa)
Type I restriction-modification system, M subunit n=3 Tax=Bacteroidales RepID=K1FU99_BACFG
Putative type I restriction-modification system, M subunit {ECO:0000313|EMBL:EET14972.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
putative type I restriction-modification system, M subunit
L3_122_123G1_scaffold_93_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4889..5146)
DNA (258bp) protein (86aa)
RNA polymerase ECF-type sigma factor n=7 Tax=Bacteroidales RepID=A6LD77_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS50811.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_122_123G1_scaffold_93_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5228..8629
DNA (3402bp) protein (1134aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISH7_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI08904.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8647..10293
DNA (1647bp) protein (549aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LD79_PARD8
Putative outer membrane protein, probably involved in nutrient binding {ECO:0000313|EMBL:ABR43643.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
hypothetical protein
L3_122_123G1_scaffold_93_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10464..11120
DNA (657bp) protein (219aa)
Endonuclease/exonuclease/phosphatase family protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISH5_9BACE
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EFI08902.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11281..12348
DNA (1068bp) protein (356aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=A6LD81_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43645.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_123G1_scaffold_93_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12375..14030
DNA (1656bp) protein (552aa)
Amino acid/peptide transporter n=3 Tax=Bacteroidales RepID=C7XCS8_9PORP
Amino acid/peptide transporter {ECO:0000313|EMBL:EEU50628.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
H+/peptide symporter
L3_122_123G1_scaffold_93_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14048..14497
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZE85_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08899.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14517..15500
DNA (984bp) protein (328aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Biotin synthase n=2 Tax=Parabacteroides RepID=C7XCS6_9PORP
biotin synthetase
L3_122_123G1_scaffold_93_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15497..16777
DNA (1281bp) protein (427aa)
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; EC=2.6.1.62 {ECO:0000256|HAMAP-Rule:MF_00834};; 7,8-diamino-pelargonic acid aminotransferase {ECO:0000256|HAMAP-Rule:MF_00834}; 7,8-diaminononanoate synthase {ECO:0000256|HAMAP-Rule:MF_00834}; Diaminopelargonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00834}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LD85_PARD8
L3_122_123G1_scaffold_93_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16808..18001
DNA (1194bp) protein (398aa)
8-amino-7-oxononanoate synthase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISH1_9BACE
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EFI08898.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
8-amino-7-oxononanoate synthase
L3_122_123G1_scaffold_93_15
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18039..18704
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6BQT5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30528.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_122_123G1_scaffold_93_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18695..19456
DNA (762bp) protein (254aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Malonyl-[acyl-carrier protein] O-methyltransferase n=3 Tax=Bacteroidales RepID=C7XCS2_9PORP
biotin synthase
L3_122_123G1_scaffold_93_17
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19676..20356
DNA (681bp) protein (227aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
ATP-dependent dethiobiotin synthetase BioD n=5 Tax=Bacteroidales RepID=C7XCS1_9PORP
dethiobiotin synthetase
L3_122_123G1_scaffold_93_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20364..20756)
DNA (393bp) protein (131aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LD90_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63150.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_122_123G1_scaffold_93_19
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20994..24080
DNA (3087bp) protein (1029aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=Bacteroidales RepID=C7XCR9_9PORP
Outer membrane protein {ECO:0000313|EMBL:EFI08893.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_20
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24114..25601
DNA (1488bp) protein (496aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISG5_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI08892.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_21
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25656..26237)
DNA (582bp) protein (194aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=D0TGG1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN30522.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_122_123G1_scaffold_93_22
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26331..27167)
DNA (837bp) protein (279aa)
Transcriptional regulator n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISG3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ83901.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
transcriptional regulator
L3_122_123G1_scaffold_93_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27287..27757)
DNA (471bp) protein (157aa)
Thioredoxin n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISG2_9BACE
Thioredoxin {ECO:0000313|EMBL:EFI08889.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
thioredoxin
L3_122_123G1_scaffold_93_24
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27978..28883)
DNA (906bp) protein (302aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7XCR4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49430.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_122_123G1_scaffold_93_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28905..29369)
DNA (465bp) protein (155aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LD97_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43661.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_123G1_scaffold_93_26
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29383..29928)
DNA (546bp) protein (182aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7XCR2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49432.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_122_123G1_scaffold_93_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29919..30470)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=5 Tax=Bacteroidales RepID=C7XCR1_9PORP
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS62975.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_123G1_scaffold_93_28
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30540..30992
DNA (453bp) protein (151aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISF7_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI08884.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_93_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31070..31750
DNA (681bp) protein (227aa)
Two-component system response regulator n=8 Tax=Bacteroidales RepID=A6LDA1_PARD8
two-component system response regulator
Putative sensory transduction protein RegX3 {ECO:0000313|EMBL:EEU50609.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_123G1_scaffold_93_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31753..33024
DNA (1272bp) protein (424aa)
Two-component system sensor histidine kinase n=3 Tax=Bacteroidales RepID=A6LDA2_PARD8
two-component system sensor histidine kinase
His Kinase A domain protein {ECO:0000313|EMBL:KDS62943.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 105 in total

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