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L3_122_123G1_scaffold_182

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_182_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(203..1057)
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LHI0_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10404.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_182_2
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1070..2119)
DNA (1050bp) protein (350aa)
Putative lipoprotein n=2 Tax=Bacteroidales RepID=A6LHI1_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ85046.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
lipoprotein
L3_122_123G1_scaffold_182_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2128..2346)
DNA (219bp) protein (73aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LHI2_PARD8
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10406.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_123G1_scaffold_182_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2500..3540
DNA (1041bp) protein (347aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LHI3_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45147.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_123G1_scaffold_182_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3780..5762)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=A6LHI4_PARD8
hypothetical protein
F5/8 type C domain protein {ECO:0000313|EMBL:KDS57407.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_123G1_scaffold_182_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6534..7706
DNA (1173bp) protein (391aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LHI5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKN22302.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_123G1_scaffold_182_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7714..8976)
DNA (1263bp) protein (421aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM33_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10410.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_182_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9108..10049)
DNA (942bp) protein (314aa)
Membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM34_9BACE
integral membrane protein
EamA-like transporter family protein {ECO:0000313|EMBL:KDS57420.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_122_123G1_scaffold_182_9
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10149..10451
DNA (303bp) protein (101aa)
PAAR repeat-containing protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85057.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_122_123G1_scaffold_182_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10534..11586
DNA (1053bp) protein (351aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM36_9BACE
L3_122_123G1_scaffold_182_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11736..12248
DNA (513bp) protein (171aa)
RNA polymerase ECF-type sigma factor n=7 Tax=Bacteroidales RepID=A6LHJ1_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EKN20389.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
L3_122_123G1_scaffold_182_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12337..13146
DNA (810bp) protein (270aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X5B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22309.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_122_123G1_scaffold_182_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13159..13332
DNA (174bp) protein (58aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=K5Z121_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22310.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_123G1_scaffold_182_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13348..14190
DNA (843bp) protein (281aa)
FecR/PupR family sigma factor regulatory protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM39_9BACE
FecR/PupR family sigma factor regulatory protein {ECO:0000313|EMBL:EFI10416.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
anti-sigma factor
L3_122_123G1_scaffold_182_15
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14205..16865
DNA (2661bp) protein (887aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM40_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI10417.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_182_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16869..17891
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D0TDU1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY83466.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_122_123G1_scaffold_182_17
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18032..20794
DNA (2763bp) protein (921aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM42_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI10419.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_182_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20799..21914
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM43_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10420.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_182_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21867..22685)
DNA (819bp) protein (273aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=E1YPB0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22316.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_122_123G1_scaffold_182_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22787..23338
DNA (552bp) protein (184aa)
RNA polymerase ECF-type sigma factor n=3 Tax=Bacteroidales RepID=D7IM45_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EKN22317.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
RNA polymerase ECF-type sigma factor
L3_122_123G1_scaffold_182_21
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23325..24707
DNA (1383bp) protein (461aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM46_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10423.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_123G1_scaffold_182_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24728..25990
DNA (1263bp) protein (421aa)
LVIVD repeat protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X5C7_9PORP
LVIVD repeat protein {ECO:0000313|EMBL:EEU53097.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_122_123G1_scaffold_182_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26010..28373)
DNA (2364bp) protein (788aa)
Efflux ABC transporter, permease protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDT4_9BACE
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEY83459.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
permease
L3_122_123G1_scaffold_182_24
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28532..29107
DNA (576bp) protein (192aa)
Sigma-54 dependent DNA-binding response regulator Fis family n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IK40_9PORP
Sigma-54 dependent DNA-binding response regulator Fis family {ECO:0000313|EMBL:CDB50728.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
two-component system response regulator
L3_122_123G1_scaffold_182_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29126..30103
DNA (978bp) protein (326aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=C7X5D0_9PORP
two-component system sensor histidine kinase
L3_122_123G1_scaffold_182_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30100..30432)
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7X5D1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU53102.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_123G1_scaffold_182_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30429..30611)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6A2V0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22324.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_122_123G1_scaffold_182_28
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30748..33450)
DNA (2703bp) protein (901aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EFK64168.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFK64168.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AFJ8_9PORP
acylaminoacyl-peptidase
L3_122_123G1_scaffold_182_29
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33928..36774
DNA (2847bp) protein (949aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X5D4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU53104.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_122_123G1_scaffold_182_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37037..37588)
DNA (552bp) protein (184aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X5D5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64170.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
Displaying items 1-30 of 66 in total

View Taxonomy