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L3_122_123G1_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_218_1
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(270..3788)
DNA (3519bp) protein (1173aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Pyruvate-flavodoxin oxidoreductase n=4 Tax=Erysipelotrichaceae RepID=B0N6M9_9FIRM
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
L3_122_123G1_scaffold_218_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4031..4501)
DNA (471bp) protein (157aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N6M8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89741.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_122_123G1_scaffold_218_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(4498..5397)
DNA (900bp) protein (300aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
UTP--glucose-1-phosphate uridylyltransferase n=4 Tax=Erysipelotrichaceae RepID=B0N6M7_9FIRM
gtaB; UTP--glucose-1-phosphate uridylyltransferase
L3_122_123G1_scaffold_218_4
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5440..6084)
DNA (645bp) protein (215aa)
Peptidase, S54 family n=3 Tax=Erysipelotrichaceae RepID=B0N6M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35242.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
GlpG protein (membrane protein of glp regulon)
L3_122_123G1_scaffold_218_5
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6086..7084)
DNA (999bp) protein (333aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RR84_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35243.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_122_123G1_scaffold_218_6
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7094..8074)
DNA (981bp) protein (327aa)
L-asparaginase, type II n=2 Tax=Erysipelotrichaceae RepID=B0N6M4_9FIRM
L-asparaginase, type II {ECO:0000313|EMBL:EHM89745.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L-asparaginase, type II
L3_122_123G1_scaffold_218_7
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8157..10823)
DNA (2667bp) protein (889aa)
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=4 Tax=Erysipelotrichaceae RepID=B0N6M3_9FIRM
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EHQ44801.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_122_123G1_scaffold_218_8
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10967..12574)
DNA (1608bp) protein (536aa)
DEAD/DEAH box helicase n=3 Tax=Erysipelotrichaceae RepID=B0N6M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44800.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
DEAD/DEAH box helicase
L3_122_123G1_scaffold_218_9
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12753..13133
DNA (381bp) protein (127aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17459.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Bacterial membrane flanked domain.
L3_122_123G1_scaffold_218_10
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13177..14082)
DNA (906bp) protein (302aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N6M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17458.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_122_123G1_scaffold_218_11
unknown

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15016..15423
DNA (408bp) protein (136aa)

This feature has no annotations

L3_122_123G1_scaffold_218_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17688..17975)
DNA (288bp) protein (96aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
CRISPR-associated endoribonuclease Cas2 n=5 Tax=Erysipelotrichaceae RepID=B0N6L8_9FIRM
CRISPR-associated protein Cas2
L3_122_123G1_scaffold_218_13
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17975..18973)
DNA (999bp) protein (333aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
CRISPR-associated endonuclease Cas1 n=4 Tax=Coprobacillus RepID=G9R5N2_9FIRM
CRISPR-associated endonuclease cas1, subtype I-b/hmari/tneap
L3_122_123G1_scaffold_218_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18985..19479)
DNA (495bp) protein (165aa)
CRISPR-associated protein Cas4 n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6L6_9FIRM
CRISPR-associated protein Cas4 {ECO:0000313|EMBL:EDS17454.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
cas4; CRISPR-associated protein Cas4
L3_122_123G1_scaffold_218_15
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(19490..22000)
DNA (2511bp) protein (837aa)
CRISPR-associated helicase cas3 n=3 Tax=Coprobacillus RepID=G9R5N3_9FIRM
CRISPR-associated helicase cas3 {ECO:0000313|EMBL:EHM89753.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cas3; crispr-associated helicase Cas3
L3_122_123G1_scaffold_218_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22038..22739)
DNA (702bp) protein (234aa)
CRISPR-associated protein cas5, subtype I-b/hmari n=2 Tax=Coprobacillus RepID=G9R5N4_9FIRM
CRISPR-associated protein cas5, subtype I-b/hmari {ECO:0000313|EMBL:EHM89754.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cas5; cas5h: CRISPR-associated protein Cas5
L3_122_123G1_scaffold_218_17
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22743..23678)
DNA (936bp) protein (312aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R5N5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89755.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
putative protein predicted to be involved in DNArepair
L3_122_123G1_scaffold_218_18
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23671..25386)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=H1AR83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ44998.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_122_123G1_scaffold_218_19
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25401..26093)
DNA (693bp) protein (231aa)
CRISPR-associated endoribonuclease cas6 n=4 Tax=Coprobacillus RepID=G9R5N8_9FIRM
CRISPR-associated endoribonuclease cas6 {ECO:0000313|EMBL:EHM89758.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
cas6; CRISPR-associated protein Cas6
L3_122_123G1_scaffold_218_20
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26537..29257)
DNA (2721bp) protein (907aa)
Glycosyl hydrolase family 38 N-terminal domain protein n=3 Tax=Erysipelotrichaceae RepID=B0N6L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89759.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
alpha-mannosidase
L3_122_123G1_scaffold_218_21
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(29303..30400)
DNA (1098bp) protein (366aa)
PTS system IIC component n=4 Tax=Coprobacillus RepID=R5RFK9_9FIRM
PTS system IIC component {ECO:0000313|EMBL:CCZ31727.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
manP; PTS system fructose/mannitol (fru) transporter subunit IIABC
L3_122_123G1_scaffold_218_22
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30503..30814)
DNA (312bp) protein (104aa)
PTS system, Fru family, IIB component {ECO:0000313|EMBL:EDS17446.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EDS17446.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system, Fru family, IIB component n=5 Tax=Erysipelotrichaceae RepID=B0N6K8_9FIRM
PTS system, Fru family, IIB component
L3_122_123G1_scaffold_218_23
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(30815..31264)
DNA (450bp) protein (150aa)
PTS system, fructose subfamily, IIA component n=1 Tax=Coprobacillus sp. D7 RepID=C3RMY3_9FIRM
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EDS17445.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
PTS system transporter subunit IIA
L3_122_123G1_scaffold_218_24
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

31460..33394
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89763.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
transcription antiterminator
L3_122_123G1_scaffold_218_25
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

33504..33911
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N6K5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17443.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_122_123G1_scaffold_218_26
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34005..34397
DNA (393bp) protein (131aa)
mutator mutT protein (EC:3.6.1.-)
Mutator mutT protein n=3 Tax=Coprobacillus RepID=G9R5P5_9FIRM
Mutator mutT protein {ECO:0000313|EMBL:EHM89765.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_122_123G1_scaffold_218_27
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

34394..37255
DNA (2862bp) protein (954aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89766.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
DNA repair helicase Rad25
L3_122_123G1_scaffold_218_28
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(37741..39672)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RMX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM89767.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
NADH:flavin oxidoreductase
L3_122_123G1_scaffold_218_29
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

39804..40985
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N6K1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS17439.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative PucR family transcriptional regulator
L3_122_123G1_scaffold_218_30
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

41608..43356
DNA (1749bp) protein (583aa)
PepF/M3 family oligoendopeptidase n=2 Tax=Coprobacillus RepID=C3RMX7_9FIRM
Oligoendopeptidase {ECO:0000313|EMBL:CCZ31856.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
oligoendopeptidase F
Displaying items 1-30 of 56 in total

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