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L3_122_123G1_scaffold_292

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_292_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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155..514
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Escherichia coli 4_1_47FAA RepID=H1BVA4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EHP66591.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
hypothetical protein
L3_122_123G1_scaffold_292_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

570..1229
DNA (660bp) protein (220aa)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
Ribose-5-phosphate isomerase A n=1372 Tax=Enterobacteriaceae RepID=RPIA_ECOK1
rpiA; ribose 5-phosphate isomerase
L3_122_123G1_scaffold_292_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1485..2717
DNA (1233bp) protein (411aa)
D-3-phosphoglycerate dehydrogenase n=1274 Tax=Enterobacteriaceae RepID=SERA_ECO57
D-3-phosphoglycerate dehydrogenase
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EZD89936.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L3_122_123G1_scaffold_292_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3106..3708)
DNA (603bp) protein (201aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1444065 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C2.;"
Ligase n=109 Tax=Escherichia coli RepID=D6IUQ6_ECOLX
ygfA; hypothetical protein
L3_122_123G1_scaffold_292_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3954..4283)
DNA (330bp) protein (110aa)
Cell division protein ZapA n=1420 Tax=Enterobacteriaceae RepID=ZAPA_ECOLX
zapA; protein that localizes to the cytokinetic ring
Cell division protein ZapA {ECO:0000256|HAMAP-Rule:MF_02012, ECO:0000256|SAAS:SAAS00072473}; Z ring-associated protein ZapA {ECO:0000256|HAMAP-Rule:MF_02012}; TaxID=868142 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2E.;"
L3_122_123G1_scaffold_292_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4451..5029
DNA (579bp) protein (193aa)
UPF0149 protein YgfB n=1380 Tax=Enterobacteriaceae RepID=YGFB_ECO24
YecA family protein
UPF0149 protein YgfB {ECO:0000256|HAMAP-Rule:MF_00346}; TaxID=1169364 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE85.;"
L3_122_123G1_scaffold_292_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5055..6380
DNA (1326bp) protein (442aa)
pepP; proline aminopeptidase P II (EC:3.4.11.9)
Proline aminopeptidase P II {ECO:0000313|EMBL:CAR14413.1}; EC=3.4.11.9 {ECO:0000313|EMBL:CAR14413.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Proline aminopeptidase P II n=80 Tax=Escherichia coli RepID=B7N7F1_ECOLU
L3_122_123G1_scaffold_292_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6377..7555
DNA (1179bp) protein (393aa)
2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding n=67 Tax=Escherichia coli RepID=B7N7F0_ECOLU
ubiH; 2-octaprenyl-6-methoxyphenyl hydroxylase
2-octaprenyl-6-methoxyphenol hydroxylase {ECO:0000313|EMBL:EQX86204.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_122_123G1_scaffold_292_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7578..8780
DNA (1203bp) protein (401aa)
2-octaprenyl-6-methoxyphenol hydroxylase n=69 Tax=Escherichia coli RepID=D6IUQ1_ECOLX
visC; hypothetical protein
Protein visC {ECO:0000313|EMBL:EQX86202.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_122_123G1_scaffold_292_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9228..10322
DNA (1095bp) protein (365aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Aminomethyltransferase n=74 Tax=Escherichia coli RepID=GCST_ECOLU
L3_122_123G1_scaffold_292_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10346..10735
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1515 Tax=cellular organisms RepID=GCSH_ECO55
gcvH; glycine cleavage system protein H
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1169664 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli AD30.;"
L3_122_123G1_scaffold_292_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10854..13727
DNA (2874bp) protein (958aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Glycine dehydrogenase (decarboxylating) n=66 Tax=Escherichia coli RepID=GCSP_ECOLU
L3_122_123G1_scaffold_292_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13893..15326)
DNA (1434bp) protein (478aa)
bglA; 6-phospho-beta-glucosidase A (EC:3.2.1.86)
6-phospho-beta-glucosidase BglA n=56 Tax=Escherichia coli RepID=L2U1L5_ECOLX
Glycosyl hydrolase, family 1 {ECO:0000313|EMBL:EFJ75806.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_292_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15371..15682
DNA (312bp) protein (104aa)
UPF0267 protein YqfB n=468 Tax=Enterobacteriaceae RepID=YQFB_ECO57
hypothetical protein
UPF0267 protein YqfB {ECO:0000256|HAMAP-Rule:MF_00684}; TaxID=1444116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 6-537-08_S1_C3.;"
L3_122_123G1_scaffold_292_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15846..16505
DNA (660bp) protein (220aa)
Hemolysin III n=11 Tax=Escherichia coli RepID=L2VIP3_ECOLX
hemolysin III family channel protein
Uncharacterized protein {ECO:0000313|EMBL:KEN95921.1}; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C2.;"
L3_122_123G1_scaffold_292_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16582..17562)
DNA (981bp) protein (327aa)
tRNA-modifying protein YgfZ n=67 Tax=Escherichia coli RepID=YGFZ_ECOLU
ygfZ; putative global regulator
tRNA-modifying protein YgfZ {ECO:0000256|HAMAP-Rule:MF_01175, ECO:0000256|SAAS:SAAS00010408}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_292_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17805..18071
DNA (267bp) protein (89aa)
Antitoxin CptB n=1369 Tax=Enterobacteriaceae RepID=CPTB_ECOLI
TPR repeat protein
Flavinator of succinate dehydrogenase family protein {ECO:0000313|EMBL:KDX24319.1}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
L3_122_123G1_scaffold_292_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18052..18459
DNA (408bp) protein (136aa)
Uncharacterized protein n=67 Tax=Escherichia coli RepID=B7N7E0_ECOLU
ygfX; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ75812.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_292_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18499..19020)
DNA (522bp) protein (174aa)
Flavodoxin-2 n=1354 Tax=Enterobacteriaceae RepID=FLAW_ECO57
fldB; flavodoxin
Flavodoxin {ECO:0000256|PIRNR:PIRNR038996}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L3_122_123G1_scaffold_292_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19132..20028
DNA (897bp) protein (299aa)
Tyrosine recombinase XerD n=76 Tax=Escherichia coli RepID=B7N7D8_ECOLU
xerD; site-specific tyrosine recombinase XerD
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
L3_122_123G1_scaffold_292_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20053..20763
DNA (711bp) protein (237aa)
dsbC; thiol:disulfide interchange protein DsbC (EC:5.3.4.1)
Protein disulfide isomerase II n=70 Tax=Escherichia coli RepID=B7N7D7_ECOLU
Thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:EQZ99126.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_122_123G1_scaffold_292_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20769..22502
DNA (1734bp) protein (578aa)
SsDNA exonuclease, 5'--> 3'-specific {ECO:0000313|EMBL:CAR14398.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAR14398.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
SsDNA exonuclease, 5'--> 3'-specific n=208 Tax=Escherichia RepID=B7MM79_ECO45
recJ; ssDNA exonuclease RecJ
L3_122_123G1_scaffold_292_23
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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22810..23691
DNA (882bp) protein (294aa)
Peptide chain release factor 2 n=1 Tax=Escherichia coli O8 (strain IAI1) RepID=RF2_ECO8A
prfB; peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
L3_122_123G1_scaffold_292_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23701..25218
DNA (1518bp) protein (506aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
Lysine--tRNA ligase n=719 Tax=Escherichia RepID=SYK1_ECOL6
L3_122_123G1_scaffold_292_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25261..25809)
DNA (549bp) protein (183aa)
idi; isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202, ECO:0000256|SAAS:SAAS00231155}; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl pyrophosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Isopentenyl-diphosphate Delta-isomerase; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Isopentenyl-diphosphate Delta-isomerase n=66 Tax=Escherichia coli RepID=IDI_ECOLU
L3_122_123G1_scaffold_292_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25932..26057)
DNA (126bp) protein (42aa)
Uncharacterized protein n=628 Tax=Escherichia RepID=B2NDB2_ECOLX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:KDW74535.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L3_122_123G1_scaffold_292_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26059..27507)
DNA (1449bp) protein (483aa)
Xanthine permease n=6 Tax=Escherichia coli RepID=I2Z2E3_ECOLX
putative permease
Putative permease {ECO:0000313|EMBL:EGI09271.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_122_123G1_scaffold_292_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27943..29862
DNA (1920bp) protein (640aa)
Oxidoreductase Fe-S binding subunit n=68 Tax=Escherichia coli RepID=D6IUN1_ECOLX
ygfT; putative oxidoreductase Fe-S binding subunit
Putative oxidoreductase Fe-S binding subunit {ECO:0000313|EMBL:ESA84795.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_292_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29862..30350
DNA (489bp) protein (163aa)
Oxidoreductase n=100 Tax=Escherichia coli RepID=D6IUN0_ECOLX
ygfS; putative oxidoreductase
4Fe-4S binding domain protein {ECO:0000313|EMBL:KDA56822.1}; TaxID=1444037 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-011-08_S1_C1.;"
L3_122_123G1_scaffold_292_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30386..31753)
DNA (1368bp) protein (456aa)
Putative permease YgfQ n=862 Tax=Enterobacteriaceae RepID=YGFQ_ECOLI
xanthine/uracil/vitamin C permease
Putative permease yjcD {ECO:0000313|EMBL:KEO30230.1}; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
Displaying items 1-30 of 44 in total

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