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L3_122_123G1_scaffold_373

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_373_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(148..1056)
DNA (909bp) protein (303aa)
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU361259}; EC=2.7.7.9 {ECO:0000256|RuleBase:RU361259};; UDP-glucose pyrophosphorylase {ECO:0000256|RuleBase:RU361259}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
UTP--glucose-1-phosphate uridylyltransferase n=1305 Tax=Enterobacteriaceae RepID=GALU_ECO57
galU; UTP-glucose-1-phosphate uridylyltransferase galU
L3_122_123G1_scaffold_373_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1258..2271)
DNA (1014bp) protein (338aa)
Regulator of RpoS n=846 Tax=Enterobacteriaceae RepID=RSSB_ECO57
hnr; orphan two-component response regulator
Regulator of RpoS {ECO:0000256|HAMAP-Rule:MF_00958}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L3_122_123G1_scaffold_373_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2363..3268)
DNA (906bp) protein (302aa)
NTE family protein rssA n=1 Tax=Escherichia coli UMEA 3805-1 RepID=T9U3G6_ECOLX
patatin
NTE family protein RssA {ECO:0000313|EMBL:ESA69162.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_122_123G1_scaffold_373_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..3839
DNA (459bp) protein (153aa)
UPF0225 protein YchJ n=84 Tax=Escherichia coli RepID=YCHJ_ECOLU
ychJ; hypothetical protein
UPF0225 protein YchJ {ECO:0000255|HAMAP-Rule:MF_00612}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_373_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3889..4731
DNA (843bp) protein (281aa)
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1182698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE98.;"
Formyltetrahydrofolate deformylase n=975 Tax=Enterobacteriaceae RepID=PURU_ECOL6
L3_122_123G1_scaffold_373_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5105..5284)
DNA (180bp) protein (60aa)
Uncharacterized protein n=55 Tax=Escherichia coli RepID=L2Y4S2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CDK45084.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
hypothetical protein
L3_122_123G1_scaffold_373_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5467..6144)
DNA (678bp) protein (226aa)
Nitrate reductase 1 gamma subunit n=1357 Tax=Enterobacteriaceae RepID=C3TCR2_ECOLX
narI; Respiratory nitrate reductase subunit gamma
Respiratory nitrate reductase, gamma subunit {ECO:0000313|EMBL:ESD90149.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_122_123G1_scaffold_373_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6144..6854)
DNA (711bp) protein (237aa)
narJ; molybdenum-cofactor-assembly chaperone subunit delta (EC:1.7.99.4)
Molybdenum-cofactor-assembly chaperone subunit (Delta subunit) of nitrate reductase 1 n=79 Tax=Escherichia coli RepID=B7N439_ECOLU
Nitrate reductase molybdenum cofactor assembly chaperone {ECO:0000313|EMBL:EFJ72562.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_373_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6851..8389)
DNA (1539bp) protein (513aa)
Nitrate reductase 1 beta subunit n=731 Tax=Enterobacteriaceae RepID=C3TCS2_ECOLX
Nitrate reductase, beta subunit {ECO:0000313|EMBL:EID65671.1}; TaxID=1090926 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli W26.;"
nitrate reductase subunit beta
L3_122_123G1_scaffold_373_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8386..12129)
DNA (3744bp) protein (1248aa)
narG; nitrate reductase 1 subunit alpha (EC:1.7.99.4)
Nitrate reductase 1, alpha subunit {ECO:0000313|EMBL:CAR12730.1}; EC=1.7.99.4 {ECO:0000313|EMBL:CAR12730.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Nitrate reductase 1, alpha subunit n=74 Tax=Bacteria RepID=B7N437_ECOLU
L3_122_123G1_scaffold_373_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12524..13915)
DNA (1392bp) protein (464aa)
Nitrite extrusion protein 1 n=160 Tax=Escherichia RepID=B1LH74_ECOSM
narK; nitrite extrusion protein 1
Nitrite extrusion protein 1 {ECO:0000313|EMBL:EFF12563.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L3_122_123G1_scaffold_373_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14010..14228)
DNA (219bp) protein (73aa)
Predicted protein n=74 Tax=Escherichia coli RepID=D6IP96_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA87796.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
hypothetical protein
L3_122_123G1_scaffold_373_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14254..16050
DNA (1797bp) protein (599aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Sensory histidine kinase in two-component regulatory system with NarL n=77 Tax=Escherichia coli RepID=B7N435_ECOLU
narX; nitrate/nitrite two-component sensor kinase
L3_122_123G1_scaffold_373_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16043..16693
DNA (651bp) protein (217aa)
DNA-binding response regulator in two-component regulatory system with NarX (Or NarQ) n=92 Tax=Escherichia coli RepID=B7N434_ECOLU
narL; transcriptional regulator NarL
Response regulator {ECO:0000313|EMBL:KDW81912.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_122_123G1_scaffold_373_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16694..18124)
DNA (1431bp) protein (477aa)
Outer membrane insertion signal domain protein n=77 Tax=Escherichia coli RepID=D7XAZ1_ECOLX
Outer membrane insertion signal domain protein {ECO:0000313|EMBL:EFJ72553.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
hypothetical protein
L3_122_123G1_scaffold_373_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18274..18627
DNA (354bp) protein (118aa)
Protein ychN n=440 Tax=Escherichia RepID=E2QLH4_ECOLX
ychN; hypothetical protein
Putative ACR protein {ECO:0000313|EMBL:CDL44898.1}; TaxID=1432559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC41.;"
L3_122_123G1_scaffold_373_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18671..19387)
DNA (717bp) protein (239aa)
ChaC protein n=228 Tax=Enterobacteriaceae RepID=A7ZKZ4_ECO24
chaC protein
Cation transporter ChaC {ECO:0000313|EMBL:EHP63891.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_122_123G1_scaffold_373_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19524..19754)
DNA (231bp) protein (77aa)
Cation transport regulator ChaB n=928 Tax=Enterobacteriaceae RepID=CHAB_ECO57
cation transport regulator protein ChaB
Cation transport regulator {ECO:0000313|EMBL:AFH10944.1}; TaxID=566546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666; / NRRL B-766 / W).;"
L3_122_123G1_scaffold_373_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20024..21124
DNA (1101bp) protein (367aa)
Calcium/sodium:proton antiporter n=108 Tax=Escherichia coli RepID=B7N429_ECOLU
chaA; calcium/sodium:proton antiporter
Putative calcium/proton exchanger {ECO:0000313|EMBL:ESD90135.1}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
L3_122_123G1_scaffold_373_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21530..21637
DNA (108bp) protein (36aa)
Small toxic polypeptide LdrA/LdrC n=167 Tax=Enterobacteriaceae RepID=LDRA_ECOLI
ldrB; small toxic polypeptide
Small toxic polypeptide ldrA/ldrC {ECO:0000313|EMBL:ELE61094.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
L3_122_123G1_scaffold_373_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21973..22080
DNA (108bp) protein (36aa)
Uncharacterized protein n=235 Tax=Enterobacteriaceae RepID=B6I9T3_ECOSE
hypothetical protein
Toxin Ldr, type I toxin-antitoxin system family protein {ECO:0000313|EMBL:KHI89461.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ28349.2}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_123G1_scaffold_373_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22115..22969)
DNA (855bp) protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; KDO-8-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00056}; Phospho-2-dehydro-3-deoxyoctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1146 Tax=Enterobacteriaceae RepID=KDSA_ECO24
L3_122_123G1_scaffold_373_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23005..23814)
DNA (810bp) protein (270aa)
Protein sirB1 n=936 Tax=Enterobacteriaceae RepID=SIRB1_ECO57
transcriptional regulator
Protein sirB1 {ECO:0000313|EMBL:EOV74316.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_122_123G1_scaffold_373_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23818..24210)
DNA (393bp) protein (131aa)
SirB2 n=75 Tax=Escherichia coli RepID=D6IP86_ECOLX
ychQ; putative transcriptional regulator
Invasion expression up-regulator, SirB {ECO:0000313|EMBL:ESA91431.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_373_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24207..25040)
DNA (834bp) protein (278aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
Release factor glutamine methyltransferase n=79 Tax=Escherichia coli RepID=B7N423_ECOLU
prmC; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
L3_122_123G1_scaffold_373_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(25040..26122)
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 n=1336 Tax=Enterobacteriaceae RepID=RF1_ECO24
prfA; peptide chain release factor RF-1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1444180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-210-07_S3_C3.;"
L3_122_123G1_scaffold_373_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26163..27419)
DNA (1257bp) protein (419aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
Glutamyl-tRNA reductase n=34 Tax=Escherichia coli RepID=I2PNX3_ECOLX
L3_122_123G1_scaffold_373_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27633..28256
DNA (624bp) protein (208aa)
Outer-membrane lipoprotein LolB n=903 Tax=Enterobacteriaceae RepID=LOLB_ECO24
outer membrane lipoprotein LolB
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L3_122_123G1_scaffold_373_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28256..29107
DNA (852bp) protein (284aa)
ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1181778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE234.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=190 Tax=Escherichia coli RepID=ISPE_ECOHS
L3_122_123G1_scaffold_373_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29192..29485
DNA (294bp) protein (98aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
Ribose-phosphate pyrophosphokinase n=1 Tax=Escherichia coli UMEA 3955-1 RepID=T9VQH9_ECOLX
prsA; ribose-phosphate pyrophosphokinase
Displaying items 1-30 of 67 in total

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