ggKbase home page

L3_122_123G1_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 89 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_418_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59..1015)
DNA (957bp) protein (319aa)
Uncharacterized protein n=24 Tax=Enterobacteriaceae RepID=B7MWJ9_ECO81
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAR08465.2}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_122_123G1_scaffold_418_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1021..2805)
DNA (1785bp) protein (595aa)
Uncharacterized protein n=27 Tax=Enterobacteriaceae RepID=B7MWK0_ECO81
hypothetical protein
AAA ATPase domain protein {ECO:0000313|EMBL:KEJ47157.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_122_123G1_scaffold_418_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2802..4367)
DNA (1566bp) protein (522aa)
putative type I restriction modification system protein (EC:3.1.21.3)
Uncharacterized protein n=30 Tax=Enterobacteriaceae RepID=L2U9M6_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESE08159.1}; TaxID=1269003 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908658.;"
L3_122_123G1_scaffold_418_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4364..6037)
DNA (1674bp) protein (558aa)
putative HsdM; type I restriction modification enzyme methylase subunit (EC:2.1.1.72)
N-6 DNA Methylase n=29 Tax=Enterobacteriaceae RepID=F3Q306_9ENTR
Eco57I restriction-modification methylase family protein {ECO:0000313|EMBL:KEO00388.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
L3_122_123G1_scaffold_418_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6886..7821)
DNA (936bp) protein (312aa)
Uncharacterized protein n=48 Tax=Escherichia coli RepID=B7NC24_ECOLU
Protein ErfK/srfK {ECO:0000313|EMBL:ESA92337.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
erfK; hypothetical protein
L3_122_123G1_scaffold_418_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7883..8962)
DNA (1080bp) protein (360aa)
cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.21 {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013328};; N(1)-alpha-phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=54 Tax=Escherichia coli RepID=COBT_ECOLU
L3_122_123G1_scaffold_418_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8974..9717)
DNA (744bp) protein (248aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
Cobalamin synthase n=63 Tax=Escherichia coli RepID=COBS_ECOLU
cobS; cobalamin synthase
L3_122_123G1_scaffold_418_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9714..10256)
DNA (543bp) protein (181aa)
Bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase n=55 Tax=Escherichia coli RepID=B7NC27_ECOLU
cobU; adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase
Bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase {ECO:0000313|EMBL:CAR13517.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_418_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10392..10829)
DNA (438bp) protein (146aa)
Uncharacterized protein n=55 Tax=Escherichia coli RepID=B7NC28_ECOLU
putative Cobalamin biosynthesis protein CbiG
Uncharacterized protein {ECO:0000313|EMBL:ESA92333.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11314..12228)
DNA (915bp) protein (305aa)
Propanediol utilization: transcriptional regulation n=56 Tax=Escherichia coli RepID=B7NC30_ECOLU
pocR; propanediol utilization: transcriptional regulation
Propanediol utilization: transcriptional regulation {ECO:0000313|EMBL:CAR13520.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_418_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12431..13240)
DNA (810bp) protein (270aa)
Propanediol diffusion facilitator n=54 Tax=Escherichia coli RepID=B7NC31_ECOLU
pduF; propanediol diffusion facilitator
Propanediol diffusion facilitator {ECO:0000313|EMBL:CAR13521.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_418_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13752..14036
DNA (285bp) protein (95aa)
E24377A n=157 Tax=Escherichia coli RepID=Q1RPE2_ECOLX
putative propanediol utilization polyhedral bodies PduA-like protein
Propanediol utilization protein PduA {ECO:0000313|EMBL:ELE55945.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_122_123G1_scaffold_418_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14033..14845
DNA (813bp) protein (271aa)
Propanediol utilization polyhedral body protein PduB n=53 Tax=Escherichia coli RepID=D6IRA1_ECOLX
putative propanediol utilization polyhedral bodies PduB
Propanediol utilization protein PduB {ECO:0000313|EMBL:ESA89567.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14864..16528
DNA (1665bp) protein (555aa)
pduC; glycerol dehydratase large subunit (EC:4.2.1.30)
Glycerol dehydratase large subunit {ECO:0000313|EMBL:CAR13524.1}; EC=4.2.1.30 {ECO:0000313|EMBL:CAR13524.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Glycerol dehydratase large subunit n=52 Tax=Escherichia coli RepID=B7NC34_ECOLU
L3_122_123G1_scaffold_418_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16538..17206
DNA (669bp) protein (223aa)
PduD; propanediol utilization: diol dehydratase, medium subunit (EC:4.2.1.30)
Propanediol utilization: diol dehydratase, medium subunit {ECO:0000313|EMBL:CAR13525.1}; EC=4.2.1.30 {ECO:0000313|EMBL:CAR13525.1};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Propanediol utilization: diol dehydratase, medium subunit n=54 Tax=Escherichia coli RepID=B7NC35_ECOLU
L3_122_123G1_scaffold_418_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17221..17739
DNA (519bp) protein (173aa)
pduE; propanediol utilization diol dehydratase, small subunit (EC:4.2.1.30)
Propanediol utilization diol dehydratase, small subunit n=54 Tax=Escherichia coli RepID=B7NC36_ECOLU
Propanediol dehydratase {ECO:0000313|EMBL:KHG99716.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_123G1_scaffold_418_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17749..19581
DNA (1833bp) protein (611aa)
Propanediol dehydratase reactivation factor large subunit n=53 Tax=Escherichia coli RepID=D6IRA5_ECOLX
putative propanediol utilization diol dehydratase reactivation PduG
Glycerol dehydratase reactivation factor, large subunit {ECO:0000313|EMBL:ESA89563.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19571..19921
DNA (351bp) protein (117aa)
Propanediol dehydratase reactivation factor small subunit n=53 Tax=Escherichia coli RepID=D6IRA6_ECOLX
putative diol dehydratase reactivation pduH
Propanediol utilization protein PduH {ECO:0000313|EMBL:ESA89562.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19941..20216
DNA (276bp) protein (92aa)
Propanediol utilization protein: polyhedral bodies n=203 Tax=Enterobacteriaceae RepID=Q1RPD5_ECOLX
carboxysome structural protein EutM
Major carboxysome shell protein 1A {ECO:0000313|EMBL:ESA89561.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20240..20662
DNA (423bp) protein (141aa)
Propanediol utilization polyhedral body protein PduK n=53 Tax=Escherichia coli RepID=D6IRA8_ECOLX
putative propanediol utilization protein PduK
BMC domain protein {ECO:0000313|EMBL:ESA89560.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20665..21297
DNA (633bp) protein (211aa)
Phosphate propanoyltransferase {ECO:0000256|PIRNR:PIRNR010130}; EC=2.3.1.222 {ECO:0000256|PIRNR:PIRNR010130};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Phosphate propanoyltransferase n=58 Tax=Escherichia coli RepID=B7NC41_ECOLU
putative propanediol utilization protein PduL
L3_122_123G1_scaffold_418_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21294..21785
DNA (492bp) protein (164aa)
Uncharacterized protein n=53 Tax=Escherichia coli RepID=B7NC42_ECOLU
putative propanediol utilization pduM
Uncharacterized protein {ECO:0000313|EMBL:ESA89558.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21789..22064
DNA (276bp) protein (92aa)
Propanediol utilization protein: polyhedral bodies n=140 Tax=Enterobacteriaceae RepID=Q1RPD1_ECOLX
propanediol utilization protein: polyhedral bodies
Ethanolamine utilization EutN/carboxysome structural Ccml family protein {ECO:0000313|EMBL:EHU45185.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_122_123G1_scaffold_418_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22076..23083
DNA (1008bp) protein (336aa)
putative propanediol utilization B12-like protein (EC:2.5.1.17)
PduO protein n=51 Tax=Escherichia coli RepID=D6IRB2_ECOLX
ATP:cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:ESA89556.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23080..24465
DNA (1386bp) protein (462aa)
CoA-acylating propionaldehyde dehydrogenase n=53 Tax=Escherichia coli RepID=D6IRB3_ECOLX
putative CoA-dependent proprionaldehyde dehydrogenase pduP
Putative CoA-dependent proprionaldehyde dehydrogenase pduP {ECO:0000313|EMBL:CAR13535.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_418_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24476..25588
DNA (1113bp) protein (371aa)
putative propanediol utilization propanol dehydrogenase pduQ (EC:1.1.1.1)
Iron-containing NADPH-dependent propanol dehydrogenase n=53 Tax=Escherichia coli RepID=D6IRB4_ECOLX
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:ESA89554.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25585..26928
DNA (1344bp) protein (448aa)
Cob(III)alamin reductase @ Cob(II)alamin reductase n=54 Tax=Escherichia coli RepID=D6IRB5_ECOLX
putative propanediol utilization ferredoxin PduS
Respiratory-chain NADH dehydrogenase subunit {ECO:0000313|EMBL:ESA89553.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_418_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26931..27485
DNA (555bp) protein (185aa)
Propanediol utilization polyhedral body protein PduT n=130 Tax=Escherichia coli RepID=D6IRB6_ECOLX
putative propanediol utilization polyhedral bodies PduT
Uncharacterized protein {ECO:0000313|EMBL:ELE55961.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
L3_122_123G1_scaffold_418_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27485..27835
DNA (351bp) protein (117aa)
Propanediol utilization protein: polyhedral bodies n=128 Tax=Escherichia coli RepID=Q1RPC5_ECOLX
putative propanediol utilization protein: polyhedral bodies pduU
Propanediol utilization protein PduU {ECO:0000313|EMBL:EQP54406.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_122_123G1_scaffold_418_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27840..28283
DNA (444bp) protein (148aa)
Propanediol utilization protein PduV n=55 Tax=Escherichia coli RepID=D6IRB8_ECOLX
putative propanediol utilization protein PduV
Putative Propanediol utilization protein pduV a.k.a. yoeF {ECO:0000313|EMBL:CAR13540.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Displaying items 1-30 of 89 in total

View Taxonomy