ggKbase home page

L3_122_123G1_scaffold_426

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_426_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

112..726
DNA (615bp) protein (205aa)
YihM protein n=70 Tax=Escherichia coli RepID=D6IWV2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA89822.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
yihM; putative sugar phosphate isomerase
L3_122_123G1_scaffold_426_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

828..2093
DNA (1266bp) protein (422aa)
Transporter, major facilitator family n=191 Tax=Enterobacteriaceae RepID=A8A6X7_ECOHS
major facilitator transporter
Inner membrane protein yihN {ECO:0000313|EMBL:KDG89962.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_122_123G1_scaffold_426_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2185..2943)
DNA (759bp) protein (253aa)
Porin ompL n=1 Tax=Escherichia coli UMEA 3200-1 RepID=T8ZWX9_ECOLX
Porin ompL {ECO:0000313|EMBL:ELE56146.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
ompL; outer membrane porin L
L3_122_123G1_scaffold_426_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2944..4347)
DNA (1404bp) protein (468aa)
Glucuronide transporter YihO n=87 Tax=Escherichia coli RepID=D6IWV5_ECOLX
yihO; putative transporter
Putative membrane protein {ECO:0000313|EMBL:CBG37076.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L3_122_123G1_scaffold_426_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4388..5773)
DNA (1386bp) protein (462aa)
Glycoside/pentoside/hexuronide transporter n=72 Tax=Escherichia coli RepID=D7X2D4_ECOLX
yihP; putative transporter
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:EFJ75578.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_426_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5819..7855)
DNA (2037bp) protein (679aa)
Glycosyl hydrolase, family 31 {ECO:0000313|EMBL:EFJ75577.1}; EC=3.2.1.- {ECO:0000313|EMBL:EFJ75577.1};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Alpha-glucosidase n=72 Tax=Escherichia coli RepID=B7NFH7_ECOLU
yihQ; alpha-glucosidase
L3_122_123G1_scaffold_426_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8060..8962)
DNA (903bp) protein (301aa)
Aldose 1-epimerase n=72 Tax=Escherichia coli RepID=D7X2D2_ECOLX
yihR; putative aldose-1-epimerase
Putative aldose-1-epimerase {ECO:0000313|EMBL:CAR15534.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_426_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9030..10271)
DNA (1242bp) protein (414aa)
Sulfoquinovose isomerase {ECO:0000256|HAMAP-Rule:MF_00998}; Short=SQ isomerase {ECO:0000256|HAMAP-Rule:MF_00998};; EC=5.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00998};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Sugar isomerase yihS n=81 Tax=Escherichia coli RepID=D6IWV9_ECOLX
putative N-acylglucosamine 2-epimerase
L3_122_123G1_scaffold_426_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10287..11165)
DNA (879bp) protein (293aa)
Sulfofructosephosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01912}; Short=SFP aldolase {ECO:0000256|HAMAP-Rule:MF_01912};; EC=4.1.2.57 {ECO:0000256|HAMAP-Rule:MF_01912};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Uncharacterized aldolase YihT n=402 Tax=Escherichia coli RepID=YIHT_ECO57
putative aldolase
L3_122_123G1_scaffold_426_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11189..12085)
DNA (897bp) protein (299aa)
3-sulfolactaldehyde reductase {ECO:0000256|HAMAP-Rule:MF_01913}; Short=SLA reductase {ECO:0000256|HAMAP-Rule:MF_01913};; EC=1.1.1.373 {ECO:0000256|HAMAP-Rule:MF_01913};; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
Dehydrogenase n=183 Tax=Escherichia RepID=D6IGB2_ECOLX
yihU; putative oxidoreductase
L3_122_123G1_scaffold_426_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12253..13149
DNA (897bp) protein (299aa)
Sulfofructose kinase {ECO:0000256|HAMAP-Rule:MF_00999}; Short=SF kinase {ECO:0000256|HAMAP-Rule:MF_00999};; EC=2.7.1.184 {ECO:0000256|HAMAP-Rule:MF_00999};; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
Kinase, PfkB family n=87 Tax=Escherichia coli RepID=D7X2C8_ECOLX
yihV; putative sugar kinase
L3_122_123G1_scaffold_426_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13183..13968
DNA (786bp) protein (262aa)
Uncharacterized HTH-type transcriptional regulator YihW n=829 Tax=Bacteria RepID=YIHW_ECOLI
DeoR-family transcriptional regulator
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:EYY77916.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
L3_122_123G1_scaffold_426_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14067..14666
DNA (600bp) protein (200aa)
HAD hydrolase, family IA, variant 3 n=80 Tax=Escherichia coli RepID=D7X2C6_ECOLX
yihX; phosphatase
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFJ75570.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_426_14
Cedecea davisae, Cedecea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14716..15321
DNA (606bp) protein (202aa)
UPF0761 membrane protein HMPREF0201_04701 n=1 Tax=Cedecea davisae DSM 4568 RepID=S3IJN6_9ENTR
rbn; Ribonuclease BN
UPF0761 membrane protein HMPREF0201_04701 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=566551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cedecea.;" source="Cedecea davisae DSM 4568.;"
L3_122_123G1_scaffold_426_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15318..15755
DNA (438bp) protein (146aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=1444155 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C2.;"
D-tyrosyl-tRNA(Tyr) deacylase n=1314 Tax=Enterobacteriaceae RepID=DTD_ECO24
D-tyrosyl-tRNA(Tyr) deacylase
L3_122_123G1_scaffold_426_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15800..16741
DNA (942bp) protein (314aa)
Galactoside O-acetyltransferase n=76 Tax=Escherichia coli RepID=D6IWW7_ECOLX
yiiD; putative acetyltransferase
Putative acetyltransferase {ECO:0000313|EMBL:CAR15543.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_426_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17157..18971
DNA (1815bp) protein (605aa)
Uncharacterized protein n=76 Tax=Escherichia coli RepID=B7NFI8_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFJ75566.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_426_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19667..19885
DNA (219bp) protein (73aa)
Uncharacterized protein n=24 Tax=Escherichia coli RepID=J7QAU3_ECOLX
yiiE; putative transcriptional regulator
Ribbon-helix-helix , copG family protein {ECO:0000313|EMBL:KDY62281.1}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
L3_122_123G1_scaffold_426_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20104..20346
DNA (243bp) protein (81aa)
Uncharacterized protein n=98 Tax=Escherichia coli RepID=B7NFJ1_ECOLU
yiiF; hypothetical protein
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein {ECO:0000313|EMBL:ESA90805.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_426_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20306..20434
DNA (129bp) protein (43aa)
Uncharacterized protein n=63 Tax=Escherichia coli RepID=G1YXF0_ECOLX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI13524.1}; TaxID=656417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M605.;"
L3_122_123G1_scaffold_426_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20528..21457)
DNA (930bp) protein (310aa)
Protein FdhE n=417 Tax=Escherichia RepID=FDHE_ECO45
formate dehydrogenase accessory protein FdhE
Protein FdhE {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_122_123G1_scaffold_426_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21454..22089)
DNA (636bp) protein (212aa)
Formate dehydrogenase, cytochrome b556(fdo) subunit n=1311 Tax=Enterobacteriaceae RepID=FDOI_ECO57
formate dehydrogenase subunit gamma
Formate dehydrogenase {ECO:0000313|EMBL:KDV40390.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
L3_122_123G1_scaffold_426_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22086..22988)
DNA (903bp) protein (301aa)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:KDU52097.1}; EC=1.2.1.2 {ECO:0000313|EMBL:KDU52097.1};; TaxID=1444224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-373-03_S4_C1.;"
Formate dehydrogenase-O iron-sulfur subunit n=988 Tax=Enterobacteriaceae RepID=FDOH_ECOL6
formate dehydrogenase-O, iron-sulfur subunit
L3_122_123G1_scaffold_426_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23001..25415)
DNA (2415bp) protein (805aa)
fdoG; formate dehydrogenase-O, large subunit (EC:1.2.1.2)
Formate dehydrogenase-O, large subunit {ECO:0000313|EMBL:CAR15551.2}; EC=1.2.1.2 {ECO:0000313|EMBL:CAR15551.2};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Formate dehydrogenase-O, large subunit n=96 Tax=Escherichia coli RepID=B7NFJ5_ECOLU
L3_122_123G1_scaffold_426_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25464..26051)
DNA (588bp) protein (196aa)
Formate dehydrogenase-O, major subunit n=4 Tax=Shigella RepID=Q31U99_SHIBS
fdoG; formate dehydrogenase-O, major subunit
Molybdopterin oxidoreductase family protein {ECO:0000313|EMBL:KEL84021.1}; TaxID=1444157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S3_C2.;"
L3_122_123G1_scaffold_426_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26245..27078
DNA (834bp) protein (278aa)
Protein FdhD n=450 Tax=Escherichia RepID=FDHD_ECO45
fdhD; formate dehydrogenase accessory protein
Protein FdhD {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_122_123G1_scaffold_426_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27128..27790
DNA (663bp) protein (221aa)
Uncharacterized protein n=73 Tax=Escherichia coli RepID=G1YXF7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA90812.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
hypothetical protein
L3_122_123G1_scaffold_426_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28211..29605
DNA (1395bp) protein (465aa)
Glycoporin RafY n=125 Tax=Escherichia coli RepID=B1LMU0_ECOSM
rafY2; glycoporin RafY
Glycoporin {ECO:0000313|EMBL:EOV59744.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L3_122_123G1_scaffold_426_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29646..29960)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256|HAMAP-Rule:MF_01663}; Type-3 mutarotase {ECO:0000256|HAMAP-Rule:MF_01663}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L-rhamnose mutarotase n=323 Tax=Escherichia coli RepID=RHAM_ECO57
hypothetical protein
L3_122_123G1_scaffold_426_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29970..30794)
DNA (825bp) protein (275aa)
rhaD; rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
Rhamnulose-1-phosphate aldolase n=83 Tax=Escherichia coli RepID=RHAD_ECOLU
Displaying items 1-30 of 100 in total

View Taxonomy