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L3_122_123G1_scaffold_494

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_494_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..348)
DNA (348bp) protein (116aa)
Alpha amylase, catalytic domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0R2_BIFLN
alpha-amylase
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EEI81555.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_494_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(508..1542)
DNA (1035bp) protein (345aa)
Transcriptional regulator, LacI family n=10 Tax=Bifidobacterium longum RepID=D6DAQ3_BIFLN
laci-type response repressor
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EIJ23030.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_494_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1675..3912)
DNA (2238bp) protein (746aa)
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBK71255.1}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207, ECO:0000313|EMBL:CBK71255.1};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
4-alpha-glucanotransferase n=5 Tax=Bifidobacterium longum RepID=D6DAQ2_BIFLN
L3_122_123G1_scaffold_494_4
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4173..4454)
DNA (282bp) protein (94aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=B3DNQ6_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY96183.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_494_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4499..5155
DNA (657bp) protein (219aa)
Secreted alpha-amylase n=4 Tax=Bacteria RepID=S3DPR7_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82774.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_122_123G1_scaffold_494_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5167..6177)
DNA (1011bp) protein (337aa)
LacI-type response repressor n=16 Tax=Bifidobacterium RepID=B3DNQ4_BIFLD
transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EEI81560.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_494_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6447..7163
DNA (717bp) protein (239aa)
MalG-type ABC sugar transport system permease component n=15 Tax=Bifidobacterium RepID=B3DNQ3_BIFLD
ABC transporter permease
ABC transporter, permease domain protein {ECO:0000313|EMBL:EIJ23059.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_494_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7275..9812
DNA (2538bp) protein (846aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium longum RepID=E4R0W0_BIFLM
alpha-glucosidase
Alpha-glucosidase {ECO:0000313|EMBL:KHD94682.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_122_123G1_scaffold_494_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9965..10078
DNA (114bp) protein (38aa)
Uncharacterized protein n=9 Tax=Bifidobacterium RepID=B3DNQ1_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ23044.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_494_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10795..12675
DNA (1881bp) protein (627aa)
Chaperone protein DnaK n=20 Tax=Bifidobacterium RepID=DNAK_BIFLD
chaperone DnaK
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_123G1_scaffold_494_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12675..13331
DNA (657bp) protein (219aa)
Protein GrpE n=14 Tax=Bifidobacterium RepID=GRPE_BIFLO
Molecular chaperone GrpE (heat shock protein)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_122_123G1_scaffold_494_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13563..14582
DNA (1020bp) protein (340aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain n=13 Tax=Bifidobacterium RepID=D6DAP4_BIFLN
chaperone
Chaperone protein similar to DnaJ {ECO:0000313|EMBL:AAN24346.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_123G1_scaffold_494_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14597..15184
DNA (588bp) protein (196aa)
GlnR n=12 Tax=Bifidobacterium RepID=E4R0V5_BIFLM
transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EIJ23036.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_494_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15457..16809
DNA (1353bp) protein (451aa)
Xanthine/uracil transport protein n=8 Tax=Bifidobacterium RepID=E8MG92_BIFL2
xanthine/uracil transport protein
Putative permease {ECO:0000313|EMBL:EEI81569.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_494_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16846..17967
DNA (1122bp) protein (374aa)
Coenzyme F390 synthetase n=14 Tax=Bifidobacterium RepID=B3DNP4_BIFLD
acyl protein synthase/acyl-CoA reductase
Acyl-protein synthetase LuxE {ECO:0000313|EMBL:EIJ30882.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_123G1_scaffold_494_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17975..19453
DNA (1479bp) protein (493aa)
Acyl-CoA reductase {ECO:0000256|PIRNR:PIRNR009414}; EC=1.2.1.50 {ECO:0000256|PIRNR:PIRNR009414};; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
Acyl-CoA reductase n=2 Tax=Bifidobacterium longum RepID=E8MG94_BIFL2
acyl-CoA reductase
L3_122_123G1_scaffold_494_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19540..20310
DNA (771bp) protein (257aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GSP3_BIFLN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EEI81572.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
3-oxoacyl-ACP reductase
L3_122_123G1_scaffold_494_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20423..21094
DNA (672bp) protein (224aa)
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED n=14 Tax=Bifidobacterium RepID=D6DAN9_BIFLN
hypothetical protein
HAD family hydrolase {ECO:0000313|EMBL:KEY23932.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_123G1_scaffold_494_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21361..22365
DNA (1005bp) protein (335aa)
ABC-type sugar transport systems, permease component n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZXH5_BIFLJ
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AEI98340.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_123G1_scaffold_494_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22381..23181
DNA (801bp) protein (267aa)
ABC-type sugar transport system, permease component n=2 Tax=Bifidobacterium longum subsp. longum RepID=D6ZXH6_BIFLJ
sugar ABC transporter permease
Sugar ABC transporter permease {ECO:0000313|EMBL:AEI98339.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_123G1_scaffold_494_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23193..25334
DNA (2142bp) protein (714aa)
Predicted beta-xylosidase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AU71_BIFLN
Predicted beta-xylosidase
Predicted beta-xylosidase {ECO:0000313|EMBL:AEI98338.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_123G1_scaffold_494_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25446..26771
DNA (1326bp) protein (442aa)
Extracellular solute-binding protein, family 1 n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXH8_BIFLJ
Family 1 extracellular solute-binding protein {ECO:0000313|EMBL:KFI66293.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
family 1 extracellular solute-binding protein
L3_122_123G1_scaffold_494_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27136..28164
DNA (1029bp) protein (343aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZXH9_BIFLJ
periplasmic-binding protein/LacI transcriptional regulator
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ADG99625.1}; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
L3_122_123G1_scaffold_494_24
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28268..28993
DNA (726bp) protein (242aa)
Uncharacterized membrane-associated protein n=17 Tax=Bifidobacterium RepID=D6DAN8_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFV36366.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_123G1_scaffold_494_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29216..30166
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6X1_BIFLO
Uncharacterized protein {ECO:0000313|EMBL:EEQ54569.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
hypothetical protein
L3_122_123G1_scaffold_494_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30236..30469)
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DAN6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP82790.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
L3_122_123G1_scaffold_494_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30590..30688
DNA (99bp) protein (33aa)
Type II/IV secretion system family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2HYX4_BIFLN
hypothetical protein
Pilus assembly protein {ECO:0000313|EMBL:KEY23929.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying 27 items

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