ggKbase home page

L3_122_123G1_scaffold_497

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_497_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(93..350)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Escherichia coli KTE10 RepID=L2UYD5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EYZ92065.1}; TaxID=1446551 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O119:H4 str. 03-3458.;"
L3_122_123G1_scaffold_497_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(476..781)
DNA (306bp) protein (102aa)
Uncharacterized protein n=85 Tax=Escherichia coli RepID=B7NBB8_ECOLU
ydhR; hypothetical protein
Putative mono-oxygenase ydhR {ECO:0000313|EMBL:ESA79798.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_497_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1355..2611
DNA (1257bp) protein (419aa)
Uncharacterized protein n=70 Tax=Escherichia coli RepID=B7NBB7_ECOLU
ydhQ; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA79799.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_497_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2652..4025)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=166 Tax=Escherichia coli RepID=MDTK_ECOLU
multidrug transporter
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
L3_122_123G1_scaffold_497_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4240..4881
DNA (642bp) protein (214aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:EZD30694.1}; EC=2.5.1.9 {ECO:0000313|EMBL:EZD30694.1};; TaxID=1446533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O111:NM str. K6722.;"
Riboflavin synthase n=999 Tax=Enterobacteriaceae RepID=RISA_ECOLI
L3_122_123G1_scaffold_497_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4921..6069)
DNA (1149bp) protein (383aa)
cfa; cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79)
Cyclopropane fatty acyl phospholipid synthase (Unsaturated-phospholipid methyltransferase) n=87 Tax=Escherichia coli RepID=B7NBB4_ECOLU
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EQN27732.1}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
L3_122_123G1_scaffold_497_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6360..7571)
DNA (1212bp) protein (404aa)
Major facilitator superfamily protein n=175 Tax=Escherichia coli RepID=D3GUF4_ECO44
ydhC; inner membrane transport protein YdhC
Inner membrane transporter ydhC {ECO:0000313|EMBL:EQX87721.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_122_123G1_scaffold_497_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7684..8616
DNA (933bp) protein (311aa)
Transcriptional regulator, LysR family n=361 Tax=Enterobacteriaceae RepID=A8A0K6_ECOHS
putative DNA-binding transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EOV76646.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_122_123G1_scaffold_497_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8613..9638)
DNA (1026bp) protein (342aa)
HTH-type transcriptional repressor PurR n=878 Tax=Enterobacteriaceae RepID=PURR_ECO55
DNA-binding transcriptional repressor PurR
HTH-type transcriptional repressor PurR {ECO:0000256|HAMAP-Rule:MF_01277, ECO:0000256|SAAS:SAAS00011512}; Pur regulon repressor {ECO:0000256|HAMAP-Rule:MF_01277}; Purine nucleotide synthesis repressor {ECO:0000256|HAMAP-Rule:MF_01277}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S1_C1.;"
L3_122_123G1_scaffold_497_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9937..10026
DNA (90bp) protein (30aa)
Uncharacterized protein ynhF n=1 Tax=Shigella dysenteriae 1617 RepID=E2XG18_SHIDY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ41361.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C3.;"
L3_122_123G1_scaffold_497_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10192..11361
DNA (1170bp) protein (390aa)
Inner membrane transporter ydhP n=13 Tax=Escherichia coli RepID=L2UAS3_ECOLX
Transporter, major facilitator family protein {ECO:0000313|EMBL:ESA79807.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
transporter
L3_122_123G1_scaffold_497_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11507..12088)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=868139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2B.;"
Superoxide dismutase [Fe] n=1325 Tax=Bacteria RepID=SODF_ECO57
sodB; superoxide dismutase, Fe
L3_122_123G1_scaffold_497_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12216..13043)
DNA (828bp) protein (276aa)
Lipoprotein n=96 Tax=Escherichia coli RepID=D6IQD5_ECOLX
ydhO; putative exported hydrolase
Uncharacterized protein {ECO:0000313|EMBL:KDG95902.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L3_122_123G1_scaffold_497_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13378..13725
DNA (348bp) protein (116aa)
Glutaredoxin-4 n=1432 Tax=Enterobacteriaceae RepID=GLRX4_ECO57
monothiol glutaredoxin protein
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L3_122_123G1_scaffold_497_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13776..18392)
DNA (4617bp) protein (1539aa)
ATP-dependent helicase Lhr n=72 Tax=Escherichia coli RepID=D6IQD3_ECOLX
DEAD/DEAH box helicase {ECO:0000313|EMBL:ESA79811.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
lhr; putative ATP-dependent helicase Lhr
L3_122_123G1_scaffold_497_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18485..19132)
DNA (648bp) protein (216aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
Ribonuclease T n=1091 Tax=Enterobacteriaceae RepID=RNT_ECO24
rnt; ribonuclease T (RNase T)
L3_122_123G1_scaffold_497_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19235..19642)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
Lactoylglutathione lyase (Fragment) n=2 Tax=Escherichia coli RepID=E9TLV7_ECOLX
gloA; lactoylglutathione lyase
L3_122_123G1_scaffold_497_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19723..20820)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase {ECO:0000313|EMBL:EKI53286.1}; EC=1.-.-.- {ECO:0000313|EMBL:EKI53286.1};; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
N-ethylmaleimide reductase n=334 Tax=Escherichia RepID=NEMA_ECOLI
nemA; N-ethylmaleimide reductase
L3_122_123G1_scaffold_497_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20857..21456)
DNA (600bp) protein (200aa)
TetR-family transcriptional regulator n=111 Tax=Escherichia coli RepID=D3GUE3_ECO44
TetR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ETE23226.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_122_123G1_scaffold_497_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21560..21799
DNA (240bp) protein (80aa)
Uncharacterized protein YdhL n=350 Tax=Enterobacteriaceae RepID=YDHL_ECOLI
Predicted Fe-S protein,Protein of unknown function (DUF1289)
Uncharacterized protein {ECO:0000313|EMBL:EQO68334.1}; TaxID=1280991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 41 (4-2677849).;"
L3_122_123G1_scaffold_497_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21848..22744
DNA (897bp) protein (299aa)
Oxidoreductase n=80 Tax=Escherichia coli RepID=D6IQC7_ECOLX
ydhF; putative oxidoreductase
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:ESA79817.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_497_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22825..23346
DNA (522bp) protein (174aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Superoxide dismutase [Cu-Zn] n=893 Tax=Enterobacteriaceae RepID=SODC_ECO57
sodC; Superoxide dismutase
L3_122_123G1_scaffold_497_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23347..25359)
DNA (2013bp) protein (671aa)
Uncharacterized protein n=96 Tax=Escherichia coli RepID=B7NB99_ECOLU
Uncharacterized protein {ECO:0000313|EMBL:CDK44792.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
ydhK; hypothetical protein
L3_122_123G1_scaffold_497_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25359..26216)
DNA (858bp) protein (286aa)
Uncharacterized protein YdhJ n=258 Tax=Escherichia RepID=YDHJ_ECOLI
ydhJ; putative membrane fusion protein (MFP) of YdhJK efflux pump
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EFJ70946.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_497_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26219..26455)
DNA (237bp) protein (79aa)
Uncharacterized protein YdhI n=991 Tax=Enterobacteriaceae RepID=YDHI_ECO57
hypothetical protein
PF07869 family protein {ECO:0000313|EMBL:EII22873.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L3_122_123G1_scaffold_497_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26656..27090
DNA (435bp) protein (145aa)
Transcriptional regulator SlyA n=478 Tax=Escherichia RepID=SLYA_ECO27
slyA; DNA-binding transcriptional activator
Transcriptional regulator SlyA {ECO:0000256|HAMAP-Rule:MF_01819}; TaxID=431946 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O150:H5 (strain SE15).;"
L3_122_123G1_scaffold_497_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27137..27604)
DNA (468bp) protein (156aa)
Outer membrane lipoprotein SlyB n=999 Tax=Enterobacteriaceae RepID=SLYB_ECO57
slyB; outer membrane lipoprotein SlyB
Outer membrane lipoprotein slyB {ECO:0000313|EMBL:ERA01221.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_122_123G1_scaffold_497_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27878..28987
DNA (1110bp) protein (370aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
Anhydro-N-acetylmuramic acid kinase n=312 Tax=Enterobacteriaceae RepID=ANMK_ECOHS
anmK; anhydro-N-acetylmuramic acid kinase
L3_122_123G1_scaffold_497_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29091..29414
DNA (324bp) protein (108aa)
Uncharacterized protein ydhA n=373 Tax=Escherichia RepID=E2QMK3_ECOLX
ydhA; lysozyme inhibitor
Membrane-bound lysozyme inhibitor of C-type lysozyme {ECO:0000313|EMBL:KDW83454.1}; TaxID=1444081 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C2.;"
L3_122_123G1_scaffold_497_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29473..30129
DNA (657bp) protein (219aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=749544 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 175-1.;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=449 Tax=Enterobacteriaceae RepID=PDXH_ECO27
Displaying items 1-30 of 58 in total

View Taxonomy