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L3_122_123G1_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_516_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

129..665
DNA (537bp) protein (179aa)
Putative fluoride ion transporter CrcB 2 n=9 Tax=Bifidobacterium longum RepID=CRCB2_BIFLO
crcB1; crcb1
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_123G1_scaffold_516_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

665..1030
DNA (366bp) protein (122aa)
Putative fluoride ion transporter CrcB 3 n=12 Tax=Bifidobacterium RepID=CRCB3_BIFLO
camphor resistance protein CrcB
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_516_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1111..1590
DNA (480bp) protein (160aa)
GtrA-like protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUI9_BIFLN
GtrA-like protein {ECO:0000313|EMBL:EEI81116.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Predicted membrane protein
L3_122_123G1_scaffold_516_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1647..2711)
DNA (1065bp) protein (355aa)
UPF0324 membrane protein BL1094 n=15 Tax=Bifidobacterium RepID=Y1094_BIFLO
membrane protein
Putative membrane spanning protein {ECO:0000313|EMBL:ESV33130.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_123G1_scaffold_516_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2881..3699)
DNA (819bp) protein (273aa)
Transcriptional regulator n=13 Tax=Bifidobacterium RepID=B3DT27_BIFLD
transcriptional regulator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:CCK34560.1}; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
L3_122_123G1_scaffold_516_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3836..4591)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUJ2_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI97909.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
L3_122_123G1_scaffold_516_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4875..5762)
DNA (888bp) protein (296aa)
Elongation factor Tu n=2 Tax=Bifidobacterium longum subsp. longum RepID=F8ARV3_BIFLN
elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_122_123G1_scaffold_516_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5935..8058)
DNA (2124bp) protein (708aa)
Elongation factor G n=21 Tax=Bacteria RepID=EFG_BIFLD
elongation factor G
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_123G1_scaffold_516_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8090..8560)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=24 Tax=Bifidobacterium RepID=RS7_BIFLD
rpsG; SSU ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_123G1_scaffold_516_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8566..8937)
DNA (372bp) protein (124aa)
30S ribosomal protein S12 n=43 Tax=Bifidobacteriaceae RepID=RS12_BIFLO
30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L3_122_123G1_scaffold_516_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9584..10645)
DNA (1062bp) protein (354aa)
Probable Na+ dependent transporter possibly for ileal bile acids n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MTS4_9BIFI
transport protein
Probable Na+ dependent transporter possibly for ileal bile acids {ECO:0000313|EMBL:CCY95155.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_516_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10979..12109
DNA (1131bp) protein (377aa)
Threonine aldolase n=4 Tax=Bifidobacterium longum RepID=B3DT34_BIFLD
amino acid lyase
Amino acid lyase {ECO:0000313|EMBL:AIW43498.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_123G1_scaffold_516_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12171..13331)
DNA (1161bp) protein (387aa)
Glycosyltransferase n=10 Tax=Bifidobacterium longum RepID=D6D9G7_BIFLN
glycosyltransferase
Glycosyl transferase {ECO:0000313|EMBL:KEY32532.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_123G1_scaffold_516_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13505..14842
DNA (1338bp) protein (446aa)
Phosphoribosylglycinamide formyltransferase 2 {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083136}; Short=GART 2 {ECO:0000256|HAMAP-Rule:MF_01643};; EC=2.1.2.- {ECO:0000256|HAMAP-Rule:MF_01643, ECO:0000256|SAAS:SAAS00083135};; 5'-phosphoribosylglycinamide transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; Formate-dependent GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01643}; GAR transformylase 2 {ECO:0000256|HAMAP-Rule:MF_01643}; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Phosphoribosylglycinamide formyltransferase 2 n=9 Tax=Bifidobacterium RepID=E8MHC4_BIFL2
phosphoribosylglycinamide formyltransferase
L3_122_123G1_scaffold_516_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15027..15149
DNA (123bp) protein (41aa)
Uncharacterized protein n=13 Tax=Bifidobacterium longum RepID=V6XZY4_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32273.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_123G1_scaffold_516_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15235..15987
DNA (753bp) protein (251aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=18 Tax=Bacteria RepID=PUR7_BIFLD
phosphoribosylaminoimidazolesuccinocarboxamide synthase
L3_122_123G1_scaffold_516_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16050..19784
DNA (3735bp) protein (1245aa)
Phosphoribosylformylglycinamidine synthase n=4 Tax=Bifidobacterium longum RepID=D6D9H1_BIFLN
Phosphoribosylformylglycinamidine synthase {ECO:0000313|EMBL:KEY23229.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
purL; purl
L3_122_123G1_scaffold_516_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19922..21220
DNA (1299bp) protein (433aa)
Esterase/lipase n=11 Tax=Bifidobacterium RepID=B3DT39_BIFLD
lipase/esterase
Esterase {ECO:0000313|EMBL:KEY32528.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_123G1_scaffold_516_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21193..22563
DNA (1371bp) protein (457aa)
Uncharacterized protein n=11 Tax=Bifidobacterium longum RepID=B3DT40_BIFLD
hypothetical protein
Alcohol acetyltransferase {ECO:0000313|EMBL:AIW43493.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_122_123G1_scaffold_516_20
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22560..23219
DNA (660bp) protein (220aa)
Uncharacterized protein n=11 Tax=Bifidobacterium RepID=C5E802_BIFLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95163.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_516_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23233..24738)
DNA (1506bp) protein (502aa)
Na+/H+ antiporter n=1 Tax=Bifidobacterium longum E18 RepID=V6XVD2_BIFLN
sodium:proton antiporter
Na+/H+ antiporter {ECO:0000313|EMBL:ESV33113.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_123G1_scaffold_516_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24885..25703
DNA (819bp) protein (273aa)
Transcriptional regulator n=8 Tax=Bifidobacterium longum RepID=E8MHB7_BIFL2
transcriptional regulator
LysR substrate-binding domain protein {ECO:0000313|EMBL:EIJ32323.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_123G1_scaffold_516_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25860..26837
DNA (978bp) protein (326aa)
Predicted oxidoreductases (Related to aryl-alcohol dehydrogenases) n=13 Tax=Bifidobacterium RepID=D6D9H6_BIFLN
hypothetical protein
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEQ54152.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_122_123G1_scaffold_516_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26871..27089)
DNA (219bp) protein (73aa)
Uncharacterized protein n=5 Tax=Bifidobacterium RepID=B3DT47_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98316.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_516_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27086..28675)
DNA (1590bp) protein (530aa)
Nucleotidyltransferase/DNA polymerase for DNA repair n=3 Tax=Bifidobacterium RepID=B3DT48_BIFLD
dinP1; Nucleotidyltransferase/DNA polymerase for DNA repair
Nucleotidyltransferase/DNA polymerase for DNA repair {ECO:0000313|EMBL:ACD98317.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_516_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28840..30342
DNA (1503bp) protein (501aa)
S-adenosyl-L-homocysteine hydrolase family protein {ECO:0000313|EMBL:CCK34538.1}; EC=3.3.1.1 {ECO:0000313|EMBL:CCK34538.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
S-adenosyl-L-homocysteine hydrolase family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I0L1_BIFLN
ahcY; S-adenosyl-L-homocysteine hydrolase
L3_122_123G1_scaffold_516_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30382..31755
DNA (1374bp) protein (458aa)
Cytosine deaminase n=17 Tax=Bifidobacterium RepID=B3DT50_BIFLD
chlorohydrolase
Possible chlorohydrolase-like protein {ECO:0000313|EMBL:AAN24923.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_123G1_scaffold_516_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31825..32295
DNA (471bp) protein (157aa)
Uncharacterized protein n=13 Tax=Bifidobacterium RepID=Q8G599_BIFLO
hypothetical protein
Cupin domain protein, PF06172 family {ECO:0000313|EMBL:EIJ22380.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_516_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32497..33360
DNA (864bp) protein (288aa)
HisJ4 n=10 Tax=Bifidobacterium RepID=E4QZR4_BIFLM
hisJ4; hisj4
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EIJ22385.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_516_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33470..34357
DNA (888bp) protein (296aa)
Permease of the ABC transporter n=5 Tax=Bifidobacterium RepID=V6XZX2_BIFLN
amino acid ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY23242.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Displaying items 1-30 of 46 in total

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