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L3_122_123G1_scaffold_693

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_693_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(95..406)
DNA (312bp) protein (104aa)
Uncharacterized protein n=82 Tax=Escherichia coli RepID=B7NAR9_ECOLU
ymdA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIX62886.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_122_123G1_scaffold_693_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(527..859)
DNA (333bp) protein (111aa)
Curli assembly protein CsgC family protein n=1 Tax=Escherichia coli 908522 RepID=V0X9W9_ECOLX
csgC; curli assembly protein
Putative curli production protein CsgC {ECO:0000313|EMBL:ABE06648.1}; TaxID=364106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UTI89 / UPEC).;"
L3_122_123G1_scaffold_693_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(918..1373)
DNA (456bp) protein (152aa)
Major curlin subunit n=257 Tax=Escherichia RepID=E2QJS6_ECOLX
csgA; cryptic curlin major subunit
Major curlin subunit {ECO:0000313|EMBL:EOU70984.1}; TaxID=1169339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE20.;"
L3_122_123G1_scaffold_693_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1414..1869)
DNA (456bp) protein (152aa)
Minor curlin subunit n=1081 Tax=Enterobacteriaceae RepID=CSGB_ECO57
curlin minor subunit
Curlin nucleator protein, minor subunit in curli complex {ECO:0000313|EMBL:CAR07386.1}; TaxID=585397 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O81 (strain ED1a).;"
L3_122_123G1_scaffold_693_5
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2624..3274
DNA (651bp) protein (217aa)
CsgAB operon transcriptional regulatory n=1071 Tax=Enterobacteriaceae RepID=B2CY47_ECOLX
csgD; transcriptional regulator CsgD
CsgBAC operon transcriptional regulatory protein {ECO:0000313|EMBL:EIQ29789.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L3_122_123G1_scaffold_693_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3279..3668
DNA (390bp) protein (130aa)
Curli production assembly/transport component CsgE n=1345 Tax=Enterobacteriaceae RepID=CSGE_ECO57
csgE; curli assembly protein CsgE
Curli production assembly/transport component, 2nd curli operon {ECO:0000313|EMBL:EHX34207.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
L3_122_123G1_scaffold_693_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3693..4109
DNA (417bp) protein (139aa)
Curli production assembly/transport component n=131 Tax=Escherichia coli RepID=D3H141_ECO44
csgF; curli assembly protein CsgF
Curli production assembly/transport component CsgF {ECO:0000313|EMBL:EQX89278.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_122_123G1_scaffold_693_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4136..4969
DNA (834bp) protein (278aa)
Curli production assembly/transport component CsgG n=1221 Tax=Enterobacteriaceae RepID=CSGG_ECO57
curli production assembly/transport component CsgG
Curli production assembly/transport protein CsgG {ECO:0000313|EMBL:EYY82738.1}; TaxID=1446735 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:NM str. 2010C-4788.;"
L3_122_123G1_scaffold_693_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5033..5554)
DNA (522bp) protein (174aa)
Uncharacterized protein n=212 Tax=Escherichia RepID=Q1RDC5_ECOUT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN81490.1}; YcdZ protein; TaxID=1359206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ST131.;"
L3_122_123G1_scaffold_693_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5626..6180)
DNA (555bp) protein (185aa)
Uncharacterized protein ycdY n=301 Tax=Escherichia RepID=E2QJR9_ECOLX
ycdY; hypothetical protein
Cytoplasmic chaperone TorD {ECO:0000313|EMBL:EFJ72689.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_693_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6204..6941)
DNA (738bp) protein (246aa)
Probable phosphatase YcdX {ECO:0000256|HAMAP-Rule:MF_01561}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01561};; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
Probable phosphatase YcdX n=1088 Tax=Enterobacteriaceae RepID=YCDX_ECO45
hydrolase
L3_122_123G1_scaffold_693_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6996..7934)
DNA (939bp) protein (313aa)
ycdW; 2-ketoacid reductase (EC:1.1.1.79)
Glyoxylate/hydroxypyruvate reductase A {ECO:0000256|HAMAP-Rule:MF_01666}; EC=1.1.1.79 {ECO:0000256|HAMAP-Rule:MF_01666};; EC=1.1.1.81 {ECO:0000256|HAMAP-Rule:MF_01666};; 2-ketoacid reductase {ECO:0000256|HAMAP-Rule:MF_01666}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Glyoxylate/hydroxypyruvate reductase A n=71 Tax=Escherichia coli RepID=GHRA_ECOLU
L3_122_123G1_scaffold_693_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8349..9035)
DNA (687bp) protein (229aa)
Uncharacterized protein n=88 Tax=Escherichia coli RepID=B7N3H9_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA94109.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_693_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9622..10686)
DNA (1065bp) protein (355aa)
Phosphate starvation-inducible protein PhoH n=77 Tax=Escherichia coli RepID=D7JM22_ECOLX
phoH; hypothetical protein
Putative phosphate starvation-inducible protein with ATPase activity {ECO:0000313|EMBL:CAR12414.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_693_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11036..12307)
DNA (1272bp) protein (424aa)
Heme-binding periplasmic protein involved in iron transport Tat-dependent exported n=78 Tax=Escherichia coli RepID=B7N3H6_ECOLU
efeB; iron transport heme-binding periplasmic protein
Peroxidase ycdB {ECO:0000313|EMBL:EQX89270.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L3_122_123G1_scaffold_693_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12313..13440)
DNA (1128bp) protein (376aa)
Ferrous iron transport binding protein n=79 Tax=Escherichia coli RepID=B7N3H5_ECOLU
efeO; hypothetical protein
Imelysin {ECO:0000313|EMBL:EFJ72764.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_693_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13498..14328)
DNA (831bp) protein (277aa)
Ferrous iron permease n=84 Tax=Escherichia coli RepID=B7N3H4_ECOLU
efeU; ferrous iron permease
Ferrous iron permease efeU {ECO:0000313|EMBL:EHP66391.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_122_123G1_scaffold_693_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15425..16768
DNA (1344bp) protein (448aa)
Uncharacterized protein n=77 Tax=Escherichia coli RepID=B7N3H2_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHP66393.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L3_122_123G1_scaffold_693_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16916..18424)
DNA (1509bp) protein (503aa)
Sodium/proline symporter n=117 Tax=Escherichia coli RepID=B1LIY8_ECOSM
putP; proline:sodium symporter
Sodium/proline symporter {ECO:0000313|EMBL:ELE44233.1}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
L3_122_123G1_scaffold_693_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18583..18792)
DNA (210bp) protein (70aa)
Uncharacterized protein n=815 Tax=Enterobacteriaceae RepID=A7ZKC0_ECO24
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESA94121.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_693_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18847..22809
DNA (3963bp) protein (1321aa)
putA; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (EC:1.5.99.8 1.5.1.12)
PutA protein n=13 Tax=Escherichia coli RepID=L2UC57_ECOLX
Delta-1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:ESA94122.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_693_22
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22849..23487)
DNA (639bp) protein (213aa)
Pyrimidine utilization regulatory protein R n=1 Tax=Escherichia coli M718 RepID=F4TCP5_ECOLX
rutR; Transcriptional regulator RutR
HTH-type transcriptional regulator RutR {ECO:0000313|EMBL:EOW65970.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
L3_122_123G1_scaffold_693_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23775..24866
DNA (1092bp) protein (364aa)
Pyrimidine monooxygenase RutA {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023214}; EC=1.14.99.46 {ECO:0000256|HAMAP-Rule:MF_01699, ECO:0000256|SAAS:SAAS00023208};; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
Pyrimidine monooxygenase RutA n=263 Tax=Escherichia coli RepID=RUTA_ECO55
ycdM; monooxygenase
L3_122_123G1_scaffold_693_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24863..25558
DNA (696bp) protein (232aa)
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023142}; EC=3.5.1.110 {ECO:0000256|HAMAP-Rule:MF_00830, ECO:0000256|SAAS:SAAS00023120};; Ureidoacrylate amidohydrolase {ECO:0000256|HAMAP-Rule:MF_00830}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB n=1 Tax=Escherichia coli KTE146 RepID=L4JAN2_ECOLX
isochorismatase, rutB
L3_122_123G1_scaffold_693_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25570..25956
DNA (387bp) protein (129aa)
Putative aminoacrylate peracid reductase RutC {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023348}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_00831, ECO:0000256|SAAS:SAAS00023353};; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
Putative aminoacrylate peracid reductase RutC n=74 Tax=Escherichia coli RepID=RUTC_ECOLU
rutC; alternative pyrimidine degradation pathway protein
L3_122_123G1_scaffold_693_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25964..26776
DNA (813bp) protein (271aa)
Putative aminoacrylate hydrolase RutD {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023219}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00832, ECO:0000256|SAAS:SAAS00023215};; Aminohydrolase {ECO:0000256|HAMAP-Rule:MF_00832}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Putative aminoacrylate hydrolase RutD n=75 Tax=Escherichia coli RepID=RUTD_ECOLU
rutD; alternative pyrimidine degradation pathway protein
L3_122_123G1_scaffold_693_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26773..27363
DNA (591bp) protein (197aa)
Probable malonic semialdehyde reductase RutE {ECO:0000255|HAMAP-Rule:MF_01204}; EC=1.1.1.298 {ECO:0000255|HAMAP-Rule:MF_01204};; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
Probable malonic semialdehyde reductase RutE n=115 Tax=Escherichia coli RepID=RUTE_ECO7I
rutE; hypothetical protein
L3_122_123G1_scaffold_693_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27374..27868
DNA (495bp) protein (165aa)
FMN reductase (NADH) RutF {ECO:0000256|HAMAP-Rule:MF_00833}; EC=1.5.1.42 {ECO:0000256|HAMAP-Rule:MF_00833};; FMN reductase {ECO:0000256|HAMAP-Rule:MF_00833}; NADH-flavin reductase RutF {ECO:0000256|HAMAP-Rule:MF_00833}; NADH:flavin oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00833}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
FMN reductase (NADH) RutF n=2 Tax=Enterobacteriaceae RepID=F4NDK4_9ENTR
ycdH; putative oxidoreductase, flavin:NADH component
L3_122_123G1_scaffold_693_29
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27889..29211
DNA (1323bp) protein (441aa)
Predicted transporter n=9 Tax=Escherichia coli RepID=C6EHK1_ECOBD
uracil-xanthine permease
Uracil permease {ECO:0000313|EMBL:CDK70560.1}; TaxID=1432547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae IS22.;"
L3_122_123G1_scaffold_693_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29300..29473)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Escherichia coli UMEA 3490-1 RepID=T9LX63_ECOLX
ymdF; hypothetical protein
Stress-induced protein, KGG, repeat protein {ECO:0000313|EMBL:EIL36457.1}; TaxID=1165949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11 str. CVM9942.;"
Displaying items 1-30 of 34 in total

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