ggKbase home page

L3_122_123G1_scaffold_762

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_762_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(450..878)
DNA (429bp) protein (143aa)
F200 n=93 Tax=Escherichia coli RepID=O87513_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQP41941.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
L3_122_123G1_scaffold_762_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(918..1478)
DNA (561bp) protein (187aa)
Uncharacterized protein n=129 Tax=Escherichia RepID=B7NCL1_ECOLU
TetR/AcrR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:ETE15154.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
L3_122_123G1_scaffold_762_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..1780)
DNA (261bp) protein (87aa)
R10 n=234 Tax=Escherichia RepID=O87512_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQY81697.1}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L3_122_123G1_scaffold_762_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2332..2964
DNA (633bp) protein (211aa)
Transposase n=73 Tax=Escherichia coli RepID=D7X8W4_ECOLX
putative transposase (fragment)
Transposase family protein {ECO:0000313|EMBL:KEN81387.1}; TaxID=1444275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C3.;"
L3_122_123G1_scaffold_762_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3606..3719
DNA (114bp) protein (38aa)
Uncharacterized protein n=64 Tax=Escherichia coli RepID=L2U3A8_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:ESA87481.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_762_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3810..4136
DNA (327bp) protein (109aa)
R13 n=88 Tax=Escherichia coli RepID=O87510_ECOLX
transposase ORF A, IS629
Transposase {ECO:0000313|EMBL:EOV59154.1}; TaxID=1182676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE69.;"
L3_122_123G1_scaffold_762_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4136..4492
DNA (357bp) protein (119aa)
Transposase R14 n=76 Tax=Escherichia coli RepID=Q6GZJ9_ECOLX
transposase
Uncharacterized protein {ECO:0000313|EMBL:ESA87476.1}; Flags: Fragment;; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_762_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4504..5022
DNA (519bp) protein (173aa)
Transposase ORF B, IS629 n=75 Tax=Escherichia coli RepID=I4TWY9_ECOLX
transposase
Integrase core domain protein {ECO:0000313|EMBL:KEJ39777.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_122_123G1_scaffold_762_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5586..5807)
DNA (222bp) protein (74aa)
Pap(17)I 10kDa protein n=90 Tax=Escherichia coli RepID=Q47439_ECOLX
papI; pap operon regulatory protein PapI
P fimbrial regulatory protein KS71A {ECO:0000313|EMBL:KEJ39778.1}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
L3_122_123G1_scaffold_762_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6224..6538
DNA (315bp) protein (105aa)
Major pilu subunit operon regulatory protein PapB n=85 Tax=Escherichia RepID=PAPB_ECOLX
papB; pap operon regulatory protein PapB
Major pilu subunit operon regulatory protein PapB {ECO:0000313|EMBL:EFJ72837.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_762_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6745..7281
DNA (537bp) protein (179aa)
Fimbrial protein n=2 Tax=Escherichia coli RepID=L3WEK1_ECOLX
papA; P-fimbriae major subunit
P-fimbriae major subunit {ECO:0000313|EMBL:CAR14502.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_762_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7351..7938
DNA (588bp) protein (196aa)
Minor pilin protein PapH n=60 Tax=Escherichia coli RepID=B7NCK1_ECOLU
papH; minor pilin protein PapH
Minor pilin protein PapH {ECO:0000313|EMBL:CAR14501.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_762_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7988..10507
DNA (2520bp) protein (840aa)
Outer membrane usher protein papC n=3 Tax=Escherichia coli RepID=L3A7L4_ECOLX
papC; outer membrane usher protein PapC
Outer membrane usher protein papC {ECO:0000313|EMBL:EOV00072.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L3_122_123G1_scaffold_762_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10593..11312
DNA (720bp) protein (240aa)
PapD n=94 Tax=Escherichia coli RepID=Q8VR39_ECOLX
papD; Chaperone protein PapD
Gram-negative pili assembly chaperone domain protein {ECO:0000313|EMBL:EFJ72841.1}; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
L3_122_123G1_scaffold_762_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11349..11930
DNA (582bp) protein (194aa)
Protein PapJ, P pilus assembly n=59 Tax=Escherichia coli RepID=B7NCJ8_ECOLU
papJ; protein PapJ , P pilus assembly
Uncharacterized protein {ECO:0000313|EMBL:ESA87421.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_762_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11940..12476
DNA (537bp) protein (179aa)
Fimbrial adapter PapK n=112 Tax=Escherichia RepID=B7NCJ7_ECOLU
papK; Fimbrial adapter PapK
Fimbrial adapter papK {ECO:0000313|EMBL:EQX79990.1}; TaxID=1281210 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3190-1.;"
L3_122_123G1_scaffold_762_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12503..13030
DNA (528bp) protein (176aa)
Fimbrial protein n=57 Tax=Escherichia coli RepID=B7NCJ6_ECOLU
prsE; Fimbrial protein
Fimbrial protein {ECO:0000313|EMBL:CAR14496.1}; TaxID=585056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC).;"
L3_122_123G1_scaffold_762_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13105..13605
DNA (501bp) protein (167aa)
PapF protein n=112 Tax=Escherichia coli RepID=Q57419_ECOLX
papF; fimbrial adapter PapF
Minor pilin subunit PapF {ECO:0000313|EMBL:KDW71030.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L3_122_123G1_scaffold_762_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13649..14659
DNA (1011bp) protein (337aa)
Fimbrial PapG protein (P pilus class II adhesin) (PapGII) n=60 Tax=Escherichia coli RepID=B7NCJ4_ECOLU
papG; Fimbrial PapG protein
PapG chaperone-binding domain protein {ECO:0000313|EMBL:ESA87425.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_122_123G1_scaffold_762_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14973..15473
DNA (501bp) protein (167aa)
PrfX protein n=134 Tax=Escherichia coli RepID=Q8GA06_ECOLX
PapX protein
MarR family transcriptional regulator {ECO:0000313|EMBL:EQP45676.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 70 (4-2963531).;"
Displaying 20 items

View Taxonomy